RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 SFPQP23246 707 aaKnown RBP eCLIP22.66■■□□□ 1.22
LIMS2-207ENST00000409808 PLCD1P51178 756 aa22.66■■□□□ 1.22
LIMS2-207ENST00000409808 TRIM29Q14134 588 aa22.66■■□□□ 1.22
LIMS2-207ENST00000409808 SART3Q15020 963 aaKnown RBP22.66■■□□□ 1.22
LIMS2-207ENST00000409808 KRT40Q6A162 431 aa22.66■■□□□ 1.22
LIMS2-207ENST00000409808 ERO1AQ96HE7 468 aa22.66■■□□□ 1.22
LIMS2-207ENST00000409808 ERICH2A1L162 156 aa22.66■■□□□ 1.22
LIMS2-207ENST00000409808 CBFA2T2O43439 604 aa22.66■■□□□ 1.22
LIMS2-207ENST00000409808 NMT2O60551 498 aa22.66■■□□□ 1.22
LIMS2-207ENST00000409808 WDHD1O75717 1129 aaPredicted RBP22.66■■□□□ 1.22
LIMS2-207ENST00000409808 U2AF2P26368 475 aaKnown RBP eCLIP22.66■■□□□ 1.22
LIMS2-207ENST00000409808 SLF2Q8IX21 1173 aa22.66■■□□□ 1.22
LIMS2-207ENST00000409808 FAM217BQ9NTX9 383 aaPredicted RBP22.66■■□□□ 1.22
LIMS2-207ENST00000409808 GOLGA8AA7E2F4 631 aa22.65■■□□□ 1.22
LIMS2-207ENST00000409808 R3HDM1Q15032 1099 aaKnown RBP22.65■■□□□ 1.22
LIMS2-207ENST00000409808 SEC23AQ15436 765 aa22.65■■□□□ 1.22
LIMS2-207ENST00000409808 TMC6Q7Z403 805 aa22.65■■□□□ 1.22
LIMS2-207ENST00000409808 STK36Q9NRP7 1315 aa22.65■■□□□ 1.22
LIMS2-207ENST00000409808 CUTAO60888 179 aa22.65■■□□□ 1.22
LIMS2-207ENST00000409808 GNL2Q13823 731 aaKnown RBP22.65■■□□□ 1.22
LIMS2-207ENST00000409808 PTPAQ15257 358 aa22.65■■□□□ 1.22
LIMS2-207ENST00000409808 ENAHQ8N8S7 591 aaPredicted RBP22.65■■□□□ 1.22
LIMS2-207ENST00000409808 ZSCAN10Q96SZ4 725 aaPredicted RBP22.65■■□□□ 1.22
LIMS2-207ENST00000409808 GJB4Q9NTQ9 266 aa22.65■■□□□ 1.22
LIMS2-207ENST00000409808 TAOK2Q9UL54 1235 aa22.65■■□□□ 1.22
LIMS2-207ENST00000409808 IARSP41252 1262 aaKnown RBP22.64■■□□□ 1.22
LIMS2-207ENST00000409808 SLC44A5Q8NCS7 719 aa22.64■■□□□ 1.22
LIMS2-207ENST00000409808 WASF1Q92558 559 aa22.64■■□□□ 1.22
LIMS2-207ENST00000409808 PHKBQ93100 1093 aa22.64■■□□□ 1.22
LIMS2-207ENST00000409808 FLT1P17948 1338 aa22.64■■□□□ 1.21
LIMS2-207ENST00000409808 ORC4O43929 436 aa22.64■■□□□ 1.21
LIMS2-207ENST00000409808 RESP18Q5W5W9 173 aa22.64■■□□□ 1.21
LIMS2-207ENST00000409808 KIAA0825Q8IV33 1275 aa22.64■■□□□ 1.21
LIMS2-207ENST00000409808 MAP3K14Q99558 947 aa22.64■■□□□ 1.21
LIMS2-207ENST00000409808 TRMT1Q9NXH9 659 aaKnown RBP22.64■■□□□ 1.21
LIMS2-207ENST00000409808 SUGT1Q9Y2Z0 365 aa22.64■■□□□ 1.21
LIMS2-207ENST00000409808 PCDHAC2Q9Y5I4 1007 aa22.64■■□□□ 1.21
LIMS2-207ENST00000409808 PPIP5K2O43314 1243 aa22.63■■□□□ 1.21
LIMS2-207ENST00000409808 FANCCQ00597 558 aa22.63■■□□□ 1.21
LIMS2-207ENST00000409808 ARMCX5Q6P1M9 558 aa22.63■■□□□ 1.21
LIMS2-207ENST00000409808 BIN1O00499 593 aa22.63■■□□□ 1.21
LIMS2-207ENST00000409808 SLU7O95391 586 aaKnown RBP22.63■■□□□ 1.21
LIMS2-207ENST00000409808 MARCKSP29966 332 aaPredicted RBP22.63■■□□□ 1.21
LIMS2-207ENST00000409808 PDE4BQ07343 736 aa22.63■■□□□ 1.21
LIMS2-207ENST00000409808 NTRK3Q16288 839 aa22.63■■□□□ 1.21
LIMS2-207ENST00000409808 E4F1Q66K89 784 aaPredicted RBP22.63■■□□□ 1.21
LIMS2-207ENST00000409808 NUP133Q8WUM0 1156 aa22.63■■□□□ 1.21
LIMS2-207ENST00000409808 MYH1P12882 1939 aa22.62■■□□□ 1.21
LIMS2-207ENST00000409808 UBE2Q2LH0YL09 131 aa22.62■■□□□ 1.21
LIMS2-207ENST00000409808 PCP11498 1178 aaKnown RBP22.62■■□□□ 1.21
LIMS2-207ENST00000409808 PLCG2P16885 1265 aa22.62■■□□□ 1.21
LIMS2-207ENST00000409808 PICALMQ13492 652 aa22.62■■□□□ 1.21
LIMS2-207ENST00000409808 DACT2Q5SW24 774 aa22.62■■□□□ 1.21
LIMS2-207ENST00000409808 CC2D2BQ6DHV5 1058 aa22.62■■□□□ 1.21
LIMS2-207ENST00000409808 ZNF654Q8IZM8 581 aa22.62■■□□□ 1.21
LIMS2-207ENST00000409808 CMTR1Q8N1G2 835 aaKnown RBP22.62■■□□□ 1.21
LIMS2-207ENST00000409808 ZNF397Q8NF99 534 aaPredicted RBP22.62■■□□□ 1.21
LIMS2-207ENST00000409808 AIFM3Q96NN9 605 aa22.62■■□□□ 1.21
LIMS2-207ENST00000409808 PPP1R1BQ9UD71 204 aaPredicted RBP22.62■■□□□ 1.21
LIMS2-207ENST00000409808 MYL5Q02045 173 aa22.62■■□□□ 1.21
LIMS2-207ENST00000409808 SHC4Q6S5L8 630 aa22.62■■□□□ 1.21
LIMS2-207ENST00000409808 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.62■■□□□ 1.21
LIMS2-207ENST00000409808 HOOK1Q9UJC3 728 aaKnown RBP22.62■■□□□ 1.21
LIMS2-207ENST00000409808 ZNF646O15015 1829 aaPredicted RBP22.61■■□□□ 1.21
LIMS2-207ENST00000409808 KIF13BQ9NQT8 1826 aa22.61■■□□□ 1.21
LIMS2-207ENST00000409808 YDJCA8MPS7 323 aa22.61■■□□□ 1.21
LIMS2-207ENST00000409808 STRIP1Q5VSL9 837 aa22.61■■□□□ 1.21
LIMS2-207ENST00000409808 IQCA1Q86XH1 822 aa22.61■■□□□ 1.21
LIMS2-207ENST00000409808 MTA3Q9BTC8 594 aa22.61■■□□□ 1.21
LIMS2-207ENST00000409808 DDX41Q9UJV9 622 aaKnown RBP22.61■■□□□ 1.21
LIMS2-207ENST00000409808 ZNF215Q9UL58 517 aaPredicted RBP22.61■■□□□ 1.21
LIMS2-207ENST00000409808 SSRP1Q08945 709 aaKnown RBP22.6■■□□□ 1.21
LIMS2-207ENST00000409808 CCDC93Q567U6 631 aa22.6■■□□□ 1.21
LIMS2-207ENST00000409808 CERS3Q8IU89 383 aa22.6■■□□□ 1.21
LIMS2-207ENST00000409808 CCDC82Q8N4S0 544 aa22.6■■□□□ 1.21
LIMS2-207ENST00000409808 PPP1R13BQ96KQ4 1090 aa22.6■■□□□ 1.21
LIMS2-207ENST00000409808 L2HGDHQ9H9P8 463 aa22.6■■□□□ 1.21
LIMS2-207ENST00000409808 NID2Q14112 1375 aa22.6■■□□□ 1.21
LIMS2-207ENST00000409808 USP17L3A6NCW0 530 aa22.6■■□□□ 1.21
LIMS2-207ENST00000409808 USP17L4A6NCW7 530 aa22.6■■□□□ 1.21
LIMS2-207ENST00000409808 TSPY2A6NKD2 308 aa22.6■■□□□ 1.21
LIMS2-207ENST00000409808 SPDYE4A6NLX3 237 aa22.6■■□□□ 1.21
LIMS2-207ENST00000409808 IFIT1BQ5T764 474 aaKnown RBP22.6■■□□□ 1.21
LIMS2-207ENST00000409808 USP17L1Q7RTZ2 530 aa22.6■■□□□ 1.21
LIMS2-207ENST00000409808 AMOTL1Q8IY63 956 aa22.6■■□□□ 1.21
LIMS2-207ENST00000409808 TMTC2Q8N394 836 aa22.6■■□□□ 1.21
LIMS2-207ENST00000409808 DDX4Q9NQI0 724 aaKnown RBP22.6■■□□□ 1.21
LIMS2-207ENST00000409808 ZNF277Q9NRM2 450 aaPredicted RBP22.6■■□□□ 1.21
LIMS2-207ENST00000409808 USP40Q9NVE5 1235 aa22.6■■□□□ 1.21
LIMS2-207ENST00000409808 TFAP4Q01664 338 aa22.59■■□□□ 1.21
LIMS2-207ENST00000409808 TEKT1Q969V4 418 aa22.59■■□□□ 1.21
LIMS2-207ENST00000409808 MTFR1LQ9H019 292 aa22.59■■□□□ 1.21
LIMS2-207ENST00000409808 MKNK2Q9HBH9 465 aa22.59■■□□□ 1.21
LIMS2-207ENST00000409808 MORC2Q9Y6X9 1032 aaPredicted RBP22.59■■□□□ 1.21
LIMS2-207ENST00000409808 DDX60LQ5H9U9 1706 aaKnown RBP22.59■■□□□ 1.21
LIMS2-207ENST00000409808 FOCADQ5VW36 1801 aa22.59■■□□□ 1.21
LIMS2-207ENST00000409808 FMNL1O95466 1100 aaPredicted RBP22.59■■□□□ 1.21
LIMS2-207ENST00000409808 CRKP46108 304 aa22.59■■□□□ 1.21
LIMS2-207ENST00000409808 RTN1Q16799 776 aa22.59■■□□□ 1.21
LIMS2-207ENST00000409808 APOBEC3HQ6NTF7 200 aaKnown RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms