RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 CCDC17Q96LX7 622 aa14.46□□□□□ -0.09
CHMP3-204ENST00000409727 CNPY2Q9Y2B0 182 aa14.46□□□□□ -0.09
CHMP3-204ENST00000409727 ATP6V1DQ9Y5K8 247 aa14.46□□□□□ -0.09
CHMP3-204ENST00000409727 COL2A1P02458 1487 aaPredicted RBP14.46□□□□□ -0.09
CHMP3-204ENST00000409727 IGKV6D-41A0A0C4DH26 115 aa14.46□□□□□ -0.1
CHMP3-204ENST00000409727 TTLL1O95922 423 aa14.46□□□□□ -0.1
CHMP3-204ENST00000409727 KIF5BP33176 963 aa14.46□□□□□ -0.1
CHMP3-204ENST00000409727 MMP14P50281 582 aa14.46□□□□□ -0.1
CHMP3-204ENST00000409727 RRP1BQ14684 758 aaKnown RBP14.46□□□□□ -0.1
CHMP3-204ENST00000409727 ABCB5Q2M3G0 1257 aa14.46□□□□□ -0.1
CHMP3-204ENST00000409727 SRBD1Q8N5C6 995 aaKnown RBP14.46□□□□□ -0.1
CHMP3-204ENST00000409727 V9GY48 417 aaPredicted RBP14.46□□□□□ -0.1
CHMP3-204ENST00000409727 PRPF40AO75400 957 aaKnown RBP14.45□□□□□ -0.1
CHMP3-204ENST00000409727 GH2P01242 217 aa14.45□□□□□ -0.1
CHMP3-204ENST00000409727 RESTQ13127 1097 aa14.45□□□□□ -0.1
CHMP3-204ENST00000409727 TNFAIP1Q13829 316 aa14.45□□□□□ -0.1
CHMP3-204ENST00000409727 GRM4Q14833 912 aa14.45□□□□□ -0.1
CHMP3-204ENST00000409727 SEPT2Q15019 361 aa14.45□□□□□ -0.1
CHMP3-204ENST00000409727 TPRNQ4KMQ1 711 aa14.45□□□□□ -0.1
CHMP3-204ENST00000409727 ANGEL2Q5VTE6 544 aaKnown RBP14.45□□□□□ -0.1
CHMP3-204ENST00000409727 USP17L2Q6R6M4 530 aa14.45□□□□□ -0.1
CHMP3-204ENST00000409727 METTL16Q86W50 562 aaKnown RBP14.45□□□□□ -0.1
CHMP3-204ENST00000409727 FBXO18Q8NFZ0 1043 aa14.45□□□□□ -0.1
CHMP3-204ENST00000409727 MAD2L2Q9UI95 211 aa14.45□□□□□ -0.1
CHMP3-204ENST00000409727 HERC5Q9UII4 1024 aaKnown RBP14.45□□□□□ -0.1
CHMP3-204ENST00000409727 STK36Q9NRP7 1315 aa14.45□□□□□ -0.1
CHMP3-204ENST00000409727 USP17L5A8MUK1 530 aa14.44□□□□□ -0.1
CHMP3-204ENST00000409727 FIBPO43427 364 aa14.44□□□□□ -0.1
CHMP3-204ENST00000409727 DEXIO95424 95 aa14.44□□□□□ -0.1
CHMP3-204ENST00000409727 JAG1P78504 1218 aa14.44□□□□□ -0.1
CHMP3-204ENST00000409727 FUT2Q10981 343 aa14.44□□□□□ -0.1
CHMP3-204ENST00000409727 TRIM29Q14134 588 aa14.44□□□□□ -0.1
CHMP3-204ENST00000409727 WASF1Q92558 559 aa14.44□□□□□ -0.1
CHMP3-204ENST00000409727 CPVLQ9H3G5 476 aa14.44□□□□□ -0.1
CHMP3-204ENST00000409727 FRMPD2Q68DX3 1309 aaPredicted RBP14.44□□□□□ -0.1
CHMP3-204ENST00000409727 CNTNAP5Q8WYK1 1306 aa14.44□□□□□ -0.1
CHMP3-204ENST00000409727 PARP1P09874 1014 aaKnown RBP14.44□□□□□ -0.1
CHMP3-204ENST00000409727 EEF2P13639 858 aaKnown RBP14.44□□□□□ -0.1
CHMP3-204ENST00000409727 NOVP48745 357 aa14.44□□□□□ -0.1
CHMP3-204ENST00000409727 KRT40Q6A162 431 aa14.44□□□□□ -0.1
CHMP3-204ENST00000409727 RNF26Q9BY78 433 aaPredicted RBP14.44□□□□□ -0.1
CHMP3-204ENST00000409727 ISY1Q9ULR0 285 aaKnown RBP14.44□□□□□ -0.1
CHMP3-204ENST00000409727 LMOD1P29536 600 aaPredicted RBP14.43□□□□□ -0.1
CHMP3-204ENST00000409727 ICA1Q05084 483 aa14.43□□□□□ -0.1
CHMP3-204ENST00000409727 PRAMEF18Q5VWM3 479 aa14.43□□□□□ -0.1
CHMP3-204ENST00000409727 TMEM179Q6ZVK1 233 aa14.43□□□□□ -0.1
CHMP3-204ENST00000409727 DEFB129Q9H1M3 183 aa14.43□□□□□ -0.1
CHMP3-204ENST00000409727 KANSL2Q9H9L4 492 aa14.43□□□□□ -0.1
CHMP3-204ENST00000409727 CABP5Q9NP86 173 aa14.43□□□□□ -0.1
CHMP3-204ENST00000409727 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.43□□□□□ -0.1
CHMP3-204ENST00000409727 KCNJ14Q9UNX9 436 aa14.43□□□□□ -0.1
CHMP3-204ENST00000409727 PRPF3O43395 683 aaKnown RBP14.42□□□□□ -0.1
CHMP3-204ENST00000409727 PDHBP11177 359 aa14.42□□□□□ -0.1
CHMP3-204ENST00000409727 HIRAP54198 1017 aaPredicted RBP14.42□□□□□ -0.1
CHMP3-204ENST00000409727 GNL2Q13823 731 aaKnown RBP14.42□□□□□ -0.1
CHMP3-204ENST00000409727 MAP3K14Q99558 947 aa14.42□□□□□ -0.1
CHMP3-204ENST00000409727 ZSCAN16Q9H4T2 348 aaPredicted RBP14.42□□□□□ -0.1
CHMP3-204ENST00000409727 GGA3Q9NZ52 723 aa14.42□□□□□ -0.1
CHMP3-204ENST00000409727 VPS54Q9P1Q0 977 aa14.42□□□□□ -0.1
CHMP3-204ENST00000409727 TFIP11Q9UBB9 837 aaKnown RBP14.42□□□□□ -0.1
CHMP3-204ENST00000409727 PGAP2Q9UHJ9 254 aa14.42□□□□□ -0.1
CHMP3-204ENST00000409727 PALM3A6NDB9 673 aaPredicted RBP14.42□□□□□ -0.1
CHMP3-204ENST00000409727 KLRF2D3W0D1 207 aa14.42□□□□□ -0.1
CHMP3-204ENST00000409727 TRAK2O60296 914 aa14.42□□□□□ -0.1
CHMP3-204ENST00000409727 PKN1Q16512 942 aa14.42□□□□□ -0.1
CHMP3-204ENST00000409727 TEPSINQ96N21 525 aa14.42□□□□□ -0.1
CHMP3-204ENST00000409727 GPCPD1Q9NPB8 672 aa14.42□□□□□ -0.1
CHMP3-204ENST00000409727 LMBRD1Q9NUN5 540 aa14.42□□□□□ -0.1
CHMP3-204ENST00000409727 GREB1LQ9C091 1923 aaPredicted RBP14.41□□□□□ -0.1
CHMP3-204ENST00000409727 KIF28PB7ZC32 967 aa14.41□□□□□ -0.1
CHMP3-204ENST00000409727 GNAQP50148 359 aa14.41□□□□□ -0.1
CHMP3-204ENST00000409727 CEBPZQ03701 1054 aaKnown RBP14.41□□□□□ -0.1
CHMP3-204ENST00000409727 CCDC96Q2M329 555 aa14.41□□□□□ -0.1
CHMP3-204ENST00000409727 USP48Q86UV5 1035 aa14.41□□□□□ -0.1
CHMP3-204ENST00000409727 UBA5Q9GZZ9 404 aa14.41□□□□□ -0.1
CHMP3-204ENST00000409727 VAT1LQ9HCJ6 419 aa14.41□□□□□ -0.1
CHMP3-204ENST00000409727 BAZ2BQ9UIF8 2168 aaKnown RBP14.41□□□□□ -0.1
CHMP3-204ENST00000409727 TCHHQ07283 1943 aa14.4□□□□□ -0.1
CHMP3-204ENST00000409727 CYTH3O43739 400 aa14.4□□□□□ -0.1
CHMP3-204ENST00000409727 KRT85P78386 507 aa14.4□□□□□ -0.1
CHMP3-204ENST00000409727 SLC35G1Q2M3R5 365 aa14.4□□□□□ -0.1
CHMP3-204ENST00000409727 NBPF12Q5TAG4 269 aaPredicted RBP14.4□□□□□ -0.1
CHMP3-204ENST00000409727 DPY19L2Q6NUT2 758 aa14.4□□□□□ -0.1
CHMP3-204ENST00000409727 SIAH1Q8IUQ4 282 aa14.4□□□□□ -0.1
CHMP3-204ENST00000409727 MYH6P13533 1939 aa14.4□□□□□ -0.1
CHMP3-204ENST00000409727 MYH4Q9Y623 1939 aa14.4□□□□□ -0.1
CHMP3-204ENST00000409727 TBC1D12O60347 775 aa14.4□□□□□ -0.1
CHMP3-204ENST00000409727 VEGFAP15692 232 aaPredicted RBP14.4□□□□□ -0.1
CHMP3-204ENST00000409727 KIF23Q02241 960 aaPredicted RBP14.4□□□□□ -0.1
CHMP3-204ENST00000409727 PPP4R3BQ5MIZ7 849 aa14.4□□□□□ -0.1
CHMP3-204ENST00000409727 KCTD1Q719H9 257 aa14.4□□□□□ -0.1
CHMP3-204ENST00000409727 HOMER1Q86YM7 354 aa14.4□□□□□ -0.1
CHMP3-204ENST00000409727 APOBEC3FQ8IUX4 373 aaKnown RBP14.4□□□□□ -0.1
CHMP3-204ENST00000409727 SHISA4Q96DD7 197 aa14.4□□□□□ -0.1
CHMP3-204ENST00000409727 FTOQ9C0B1 505 aaKnown RBP eCLIP14.4□□□□□ -0.1
CHMP3-204ENST00000409727 NYAP2Q9P242 653 aa14.4□□□□□ -0.1
CHMP3-204ENST00000409727 ZBTB21Q9ULJ3 1066 aa14.4□□□□□ -0.1
CHMP3-204ENST00000409727 MMP1P03956 469 aa14.39□□□□□ -0.11
CHMP3-204ENST00000409727 SCG2P13521 617 aa14.39□□□□□ -0.11
CHMP3-204ENST00000409727 XBP1P17861 261 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms