RNA–Protein interactions for RNA: ENST00000409469.5

CUL1-202, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 2,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-202ENST00000409469 CDK5RAP2Q96SN8 1893 aa11.43□□□□□ -0.58
CUL1-202ENST00000409469 SNED1Q8TER0 1413 aa11.43□□□□□ -0.58
CUL1-202ENST00000409469 LRRC37AA6NMS7 1700 aa11.43□□□□□ -0.58
CUL1-202ENST00000409469 ALDH1B1P30837 517 aa11.43□□□□□ -0.58
CUL1-202ENST00000409469 AOC3Q16853 763 aa11.43□□□□□ -0.58
CUL1-202ENST00000409469 C17orf53Q8N3J3 647 aaPredicted RBP11.43□□□□□ -0.58
CUL1-202ENST00000409469 TMEM47Q9BQJ4 181 aa11.43□□□□□ -0.58
CUL1-202ENST00000409469 MTA3Q9BTC8 594 aa11.43□□□□□ -0.58
CUL1-202ENST00000409469 CYTH3O43739 400 aa11.42□□□□□ -0.58
CUL1-202ENST00000409469 DDAH1O94760 285 aa11.42□□□□□ -0.58
CUL1-202ENST00000409469 DPCR1Q3MIW9 517 aa11.42□□□□□ -0.58
CUL1-202ENST00000409469 USP17L2Q6R6M4 530 aa11.42□□□□□ -0.58
CUL1-202ENST00000409469 HOMER1Q86YM7 354 aa11.42□□□□□ -0.58
CUL1-202ENST00000409469 CEP95Q96GE4 821 aa11.42□□□□□ -0.58
CUL1-202ENST00000409469 PHF20Q9BVI0 1012 aa11.42□□□□□ -0.58
CUL1-202ENST00000409469 DDX60LQ5H9U9 1706 aaKnown RBP11.42□□□□□ -0.58
CUL1-202ENST00000409469 TNS1Q9HBL0 1735 aaKnown RBP11.42□□□□□ -0.58
CUL1-202ENST00000409469 SLX4Q8IY92 1834 aa11.42□□□□□ -0.58
CUL1-202ENST00000409469 GAKO14976 1311 aa11.42□□□□□ -0.58
CUL1-202ENST00000409469 A0A1W2PQ27 194 aa11.42□□□□□ -0.58
CUL1-202ENST00000409469 A0A1W2PQ64 194 aa11.42□□□□□ -0.58
CUL1-202ENST00000409469 A0A1W2PQD8 194 aa11.42□□□□□ -0.58
CUL1-202ENST00000409469 H0YIN7 160 aa11.42□□□□□ -0.58
CUL1-202ENST00000409469 PRPF3O43395 683 aaKnown RBP11.42□□□□□ -0.58
CUL1-202ENST00000409469 PCP11498 1178 aaKnown RBP11.42□□□□□ -0.58
CUL1-202ENST00000409469 PNOCQ13519 176 aa11.42□□□□□ -0.58
CUL1-202ENST00000409469 ZSCAN30Q86W11 494 aa11.42□□□□□ -0.58
CUL1-202ENST00000409469 GRAMD1CQ8IYS0 662 aa11.42□□□□□ -0.58
CUL1-202ENST00000409469 TBC1D22AQ8WUA7 517 aa11.42□□□□□ -0.58
CUL1-202ENST00000409469 VAT1LQ9HCJ6 419 aa11.42□□□□□ -0.58
CUL1-202ENST00000409469 USP40Q9NVE5 1235 aa11.42□□□□□ -0.58
CUL1-202ENST00000409469 FAM205AQ6ZU69 1335 aa11.42□□□□□ -0.58
CUL1-202ENST00000409469 C21orf2O43822 256 aa11.42□□□□□ -0.58
CUL1-202ENST00000409469 SYKP43405 635 aa11.42□□□□□ -0.58
CUL1-202ENST00000409469 RBM5P52756 815 aaKnown RBP eCLIP11.42□□□□□ -0.58
CUL1-202ENST00000409469 ZNF174Q15697 407 aa11.42□□□□□ -0.58
CUL1-202ENST00000409469 PIK3AP1Q6ZUJ8 805 aa11.42□□□□□ -0.58
CUL1-202ENST00000409469 LRRC47Q8N1G4 583 aaKnown RBP11.42□□□□□ -0.58
CUL1-202ENST00000409469 CAMKK2Q96RR4 588 aa11.42□□□□□ -0.58
CUL1-202ENST00000409469 FOXP1Q9H334 677 aaPredicted RBP11.42□□□□□ -0.58
CUL1-202ENST00000409469 RBM28Q9NW13 759 aaKnown RBP11.42□□□□□ -0.58
CUL1-202ENST00000409469 MAD2L2Q9UI95 211 aa11.42□□□□□ -0.58
CUL1-202ENST00000409469 FRMPD2Q68DX3 1309 aaPredicted RBP11.41□□□□□ -0.58
CUL1-202ENST00000409469 CMA1P23946 247 aa11.41□□□□□ -0.58
CUL1-202ENST00000409469 MSNP26038 577 aaKnown RBP11.41□□□□□ -0.58
CUL1-202ENST00000409469 KRT2P35908 639 aa11.41□□□□□ -0.58
CUL1-202ENST00000409469 NLRP5P59047 1200 aa11.41□□□□□ -0.58
CUL1-202ENST00000409469 LONRF3Q496Y0 759 aa11.41□□□□□ -0.58
CUL1-202ENST00000409469 TMX4Q9H1E5 349 aaPredicted RBP11.41□□□□□ -0.58
CUL1-202ENST00000409469 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.41□□□□□ -0.58
CUL1-202ENST00000409469 NRXN2Q9P2S2 1712 aa11.41□□□□□ -0.58
CUL1-202ENST00000409469 CALM1P0DP23 149 aa11.41□□□□□ -0.58
CUL1-202ENST00000409469 CALM2P0DP24 149 aa11.41□□□□□ -0.58
CUL1-202ENST00000409469 CALM3P0DP25 149 aa11.41□□□□□ -0.58
CUL1-202ENST00000409469 SCG2P13521 617 aa11.41□□□□□ -0.58
CUL1-202ENST00000409469 AKR1B1P15121 316 aa11.41□□□□□ -0.58
CUL1-202ENST00000409469 RCAN1P53805 252 aa11.41□□□□□ -0.58
CUL1-202ENST00000409469 MAPK8IP2Q13387 824 aaPredicted RBP11.41□□□□□ -0.58
CUL1-202ENST00000409469 UVSSAQ2YD98 709 aa11.41□□□□□ -0.58
CUL1-202ENST00000409469 CDC42EP5Q6NZY7 148 aa11.41□□□□□ -0.58
CUL1-202ENST00000409469 C16orf86Q6ZW13 317 aa11.41□□□□□ -0.58
CUL1-202ENST00000409469 FLAD1Q8NFF5 587 aa11.41□□□□□ -0.58
CUL1-202ENST00000409469 UBA5Q9GZZ9 404 aa11.41□□□□□ -0.58
CUL1-202ENST00000409469 ROBO3Q96MS0 1386 aa11.4□□□□□ -0.58
CUL1-202ENST00000409469 ECE2O60344 883 aa11.4□□□□□ -0.58
CUL1-202ENST00000409469 AOPEPQ8N6M6 819 aa11.4□□□□□ -0.58
CUL1-202ENST00000409469 NRBP1Q9UHY1 535 aa11.4□□□□□ -0.58
CUL1-202ENST00000409469 FBXO2Q9UK22 296 aaPredicted RBP11.4□□□□□ -0.58
CUL1-202ENST00000409469 DLEC1Q9Y238 1755 aa11.4□□□□□ -0.58
CUL1-202ENST00000409469 SCN9AQ15858 1988 aa11.4□□□□□ -0.58
CUL1-202ENST00000409469 PPP6R2O75170 966 aa11.4□□□□□ -0.58
CUL1-202ENST00000409469 CASP1P29466 404 aa11.4□□□□□ -0.58
CUL1-202ENST00000409469 ATP2B2Q01814 1243 aa11.4□□□□□ -0.58
CUL1-202ENST00000409469 STX1AQ16623 288 aa11.4□□□□□ -0.58
CUL1-202ENST00000409469 APOBEC3HQ6NTF7 200 aaKnown RBP11.4□□□□□ -0.58
CUL1-202ENST00000409469 HEATR3Q7Z4Q2 680 aa11.4□□□□□ -0.58
CUL1-202ENST00000409469 DGKHQ86XP1 1220 aa11.4□□□□□ -0.58
CUL1-202ENST00000409469 KRI1Q8N9T8 703 aaKnown RBP11.4□□□□□ -0.58
CUL1-202ENST00000409469 CSRNP2Q9H175 543 aa11.4□□□□□ -0.58
CUL1-202ENST00000409469 KIAA1468Q9P260 1216 aa11.4□□□□□ -0.58
CUL1-202ENST00000409469 MYH1P12882 1939 aa11.39□□□□□ -0.59
CUL1-202ENST00000409469 CLCN1P35523 988 aa11.39□□□□□ -0.59
CUL1-202ENST00000409469 IQCB1Q15051 598 aa11.39□□□□□ -0.59
CUL1-202ENST00000409469 RILPL1Q5EBL4 403 aa11.39□□□□□ -0.59
CUL1-202ENST00000409469 RESP18Q5W5W9 173 aa11.39□□□□□ -0.59
CUL1-202ENST00000409469 FAM163AQ96GL9 167 aaPredicted RBP11.39□□□□□ -0.59
CUL1-202ENST00000409469 EPSTI1Q96J88 318 aa11.39□□□□□ -0.59
CUL1-202ENST00000409469 TRIM5Q9C035 493 aa11.39□□□□□ -0.59
CUL1-202ENST00000409469 STK32BQ9NY57 414 aa11.39□□□□□ -0.59
CUL1-202ENST00000409469 KCNH3Q9ULD8 1083 aa11.39□□□□□ -0.59
CUL1-202ENST00000409469 POLR2DO15514 142 aaKnown RBP11.39□□□□□ -0.59
CUL1-202ENST00000409469 PRR29P0C7W0 189 aa11.39□□□□□ -0.59
CUL1-202ENST00000409469 XBP1P17861 261 aa11.39□□□□□ -0.59
CUL1-202ENST00000409469 CDC25AP30304 524 aa11.39□□□□□ -0.59
CUL1-202ENST00000409469 CRKP46108 304 aa11.39□□□□□ -0.59
CUL1-202ENST00000409469 PFKFB3Q16875 520 aaPredicted RBP11.39□□□□□ -0.59
CUL1-202ENST00000409469 TMC4Q7Z404 712 aa11.39□□□□□ -0.59
CUL1-202ENST00000409469 METTL16Q86W50 562 aaKnown RBP11.39□□□□□ -0.59
CUL1-202ENST00000409469 DHX40Q8IX18 779 aaKnown RBP11.39□□□□□ -0.59
CUL1-202ENST00000409469 NOL7Q9UMY1 257 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms