RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 TRIM59Q8IWR1 403 aa15.19■□□□□ 0.02
AFF3-202ENST00000409236 OR9Q1Q8NGQ5 310 aa15.19■□□□□ 0.02
AFF3-202ENST00000409236 CCDC85AQ96PX6 553 aaPredicted RBP15.19■□□□□ 0.02
AFF3-202ENST00000409236 HAND2P61296 217 aa15.19■□□□□ 0.02
AFF3-202ENST00000409236 HDAC1Q13547 482 aaPredicted RBP15.19■□□□□ 0.02
AFF3-202ENST00000409236 FAM133BQ5BKY9 247 aaKnown RBP15.19■□□□□ 0.02
AFF3-202ENST00000409236 BLVRAP53004 296 aa15.18■□□□□ 0.02
AFF3-202ENST00000409236 RINT1Q6NUQ1 792 aa15.18■□□□□ 0.02
AFF3-202ENST00000409236 SRGAP2BP0DMP2 458 aa15.18■□□□□ 0.02
AFF3-202ENST00000409236 GUCY2FP51841 1108 aa15.18■□□□□ 0.02
AFF3-202ENST00000409236 SLC13A4Q9UKG4 626 aa15.18■□□□□ 0.02
AFF3-202ENST00000409236 EPRSP07814 1512 aaKnown RBP15.18■□□□□ 0.02
AFF3-202ENST00000409236 NCOA2Q15596 1464 aa15.18■□□□□ 0.02
AFF3-202ENST00000409236 NSD2O96028 1365 aa15.18■□□□□ 0.02
AFF3-202ENST00000409236 LONRF2Q1L5Z9 754 aa15.18■□□□□ 0.02
AFF3-202ENST00000409236 MLKLQ8NB16 471 aa15.18■□□□□ 0.02
AFF3-202ENST00000409236 NEUROG2Q9H2A3 272 aa15.18■□□□□ 0.02
AFF3-202ENST00000409236 STAM2O75886 525 aa15.18■□□□□ 0.02
AFF3-202ENST00000409236 HOXA7P31268 230 aaPredicted RBP15.18■□□□□ 0.02
AFF3-202ENST00000409236 TRIM50Q86XT4 487 aa15.18■□□□□ 0.02
AFF3-202ENST00000409236 TRIML2Q8N7C3 387 aa15.18■□□□□ 0.02
AFF3-202ENST00000409236 GIPC2Q8TF65 315 aa15.18■□□□□ 0.02
AFF3-202ENST00000409236 RCN2Q14257 317 aa15.18■□□□□ 0.02
AFF3-202ENST00000409236 ARHGEF18Q6ZSZ5 1173 aa15.18■□□□□ 0.02
AFF3-202ENST00000409236 KLHL29Q96CT2 875 aa15.18■□□□□ 0.02
AFF3-202ENST00000409236 SH3GL2Q99962 352 aa15.18■□□□□ 0.02
AFF3-202ENST00000409236 ECE1P42892 770 aa15.18■□□□□ 0.02
AFF3-202ENST00000409236 STX17P56962 302 aa15.18■□□□□ 0.02
AFF3-202ENST00000409236 ATP2B3Q16720 1220 aa15.18■□□□□ 0.02
AFF3-202ENST00000409236 ART3Q13508 389 aa15.17■□□□□ 0.02
AFF3-202ENST00000409236 BRF1Q92994 677 aa15.17■□□□□ 0.02
AFF3-202ENST00000409236 TRPC1P48995 793 aa15.17■□□□□ 0.02
AFF3-202ENST00000409236 MCTP2Q6DN12 878 aa15.17■□□□□ 0.02
AFF3-202ENST00000409236 MYD88Q99836 296 aa15.17■□□□□ 0.02
AFF3-202ENST00000409236 ANKRD36BQ8N2N9 1353 aa15.17■□□□□ 0.02
AFF3-202ENST00000409236 CARSP49589 748 aaKnown RBP15.17■□□□□ 0.02
AFF3-202ENST00000409236 GLE1Q53GS7 698 aaKnown RBP15.17■□□□□ 0.02
AFF3-202ENST00000409236 CSGALNACT2Q8N6G5 542 aa15.17■□□□□ 0.02
AFF3-202ENST00000409236 TRAIPQ9BWF2 469 aa15.17■□□□□ 0.02
AFF3-202ENST00000409236 CDK19Q9BWU1 502 aa15.17■□□□□ 0.02
AFF3-202ENST00000409236 CAPN11Q9UMQ6 739 aa15.17■□□□□ 0.02
AFF3-202ENST00000409236 ATF2P15336 505 aa15.17■□□□□ 0.02
AFF3-202ENST00000409236 NECAB1Q8N987 351 aa15.17■□□□□ 0.02
AFF3-202ENST00000409236 KCNG1Q9UIX4 513 aa15.17■□□□□ 0.02
AFF3-202ENST00000409236 ING2Q9H160 280 aa15.17■□□□□ 0.02
AFF3-202ENST00000409236 TTC41PQ6P2S7 1318 aa15.17■□□□□ 0.02
AFF3-202ENST00000409236 CCDC78A2IDD5 438 aa15.17■□□□□ 0.02
AFF3-202ENST00000409236 SUCLA2Q9P2R7 463 aaPredicted RBP15.17■□□□□ 0.02
AFF3-202ENST00000409236 A0A1B0GVL5 298 aa15.17■□□□□ 0.02
AFF3-202ENST00000409236 TTC25Q96NG3 672 aa15.17■□□□□ 0.02
AFF3-202ENST00000409236 RAB20Q9NX57 234 aa15.17■□□□□ 0.02
AFF3-202ENST00000409236 PRR23D1E9PI22 279 aaPredicted RBP15.17■□□□□ 0.02
AFF3-202ENST00000409236 ZBTB24O43167 697 aaPredicted RBP15.17■□□□□ 0.02
AFF3-202ENST00000409236 SPAG7O75391 227 aa15.17■□□□□ 0.02
AFF3-202ENST00000409236 PRR23D2P0DMB1 279 aaPredicted RBP15.17■□□□□ 0.02
AFF3-202ENST00000409236 CCT5P48643 541 aa15.17■□□□□ 0.02
AFF3-202ENST00000409236 STX19Q8N4C7 294 aa15.17■□□□□ 0.02
AFF3-202ENST00000409236 FGD4Q96M96 766 aa15.17■□□□□ 0.02
AFF3-202ENST00000409236 TTLL3Q9Y4R7 772 aa15.17■□□□□ 0.02
AFF3-202ENST00000409236 MCF2LO15068 1137 aa15.16■□□□□ 0.02
AFF3-202ENST00000409236 TCP11Q8WWU5 503 aa15.16■□□□□ 0.02
AFF3-202ENST00000409236 FANCCQ00597 558 aa15.16■□□□□ 0.02
AFF3-202ENST00000409236 NCAPH2Q6IBW4 605 aa15.16■□□□□ 0.02
AFF3-202ENST00000409236 SESTD1Q86VW0 696 aa15.16■□□□□ 0.02
AFF3-202ENST00000409236 CCPG1Q9ULG6 757 aa15.16■□□□□ 0.02
AFF3-202ENST00000409236 DCTN3O75935 186 aa15.16■□□□□ 0.02
AFF3-202ENST00000409236 TMEM247A6NEH6 219 aa15.16■□□□□ 0.02
AFF3-202ENST00000409236 DKC1O60832 514 aaKnown RBP eCLIP15.16■□□□□ 0.02
AFF3-202ENST00000409236 MMS22LQ6ZRQ5 1243 aa15.16■□□□□ 0.02
AFF3-202ENST00000409236 TEX9Q8N6V9 391 aa15.16■□□□□ 0.02
AFF3-202ENST00000409236 KCNH5Q8NCM2 988 aa15.16■□□□□ 0.02
AFF3-202ENST00000409236 GSDMAQ96QA5 445 aa15.16■□□□□ 0.02
AFF3-202ENST00000409236 LLPHQ9BRT6 129 aaKnown RBP15.16■□□□□ 0.02
AFF3-202ENST00000409236 CCDC8Q9H0W5 538 aaPredicted RBP15.16■□□□□ 0.02
AFF3-202ENST00000409236 CD2APQ9Y5K6 639 aa15.16■□□□□ 0.02
AFF3-202ENST00000409236 RWDD2BP57060 319 aa15.16■□□□□ 0.02
AFF3-202ENST00000409236 NVLO15381 856 aaKnown RBP15.16■□□□□ 0.02
AFF3-202ENST00000409236 INHBAP08476 426 aa15.16■□□□□ 0.02
AFF3-202ENST00000409236 CFAP70Q5T0N1 1121 aa15.16■□□□□ 0.02
AFF3-202ENST00000409236 VTI1AQ96AJ9 217 aa15.16■□□□□ 0.02
AFF3-202ENST00000409236 PRAM1Q96QH2 718 aa15.16■□□□□ 0.02
AFF3-202ENST00000409236 INTS9Q9NV88 658 aaKnown RBP15.16■□□□□ 0.02
AFF3-202ENST00000409236 ARHGAP26Q9UNA1 814 aa15.16■□□□□ 0.02
AFF3-202ENST00000409236 DAB1O75553 588 aa15.15■□□□□ 0.02
AFF3-202ENST00000409236 TRIM27P14373 513 aa15.15■□□□□ 0.02
AFF3-202ENST00000409236 IRX1P78414 480 aaPredicted RBP15.15■□□□□ 0.02
AFF3-202ENST00000409236 TRMT10CQ7L0Y3 403 aaKnown RBP15.15■□□□□ 0.02
AFF3-202ENST00000409236 TRMT112Q9UI30 125 aaKnown RBP15.15■□□□□ 0.02
AFF3-202ENST00000409236 VWA3AA6NCI4 1184 aa15.15■□□□□ 0.02
AFF3-202ENST00000409236 CCDC15Q0P6D6 951 aa15.15■□□□□ 0.02
AFF3-202ENST00000409236 ZBTB9Q96C00 473 aa15.15■□□□□ 0.02
AFF3-202ENST00000409236 RABGGTAQ92696 567 aa15.15■□□□□ 0.02
AFF3-202ENST00000409236 LARP6Q9BRS8 491 aaKnown RBP15.15■□□□□ 0.02
AFF3-202ENST00000409236 MRPS26Q9BYN8 205 aaKnown RBP15.15■□□□□ 0.02
AFF3-202ENST00000409236 GPC4O75487 556 aa15.15■□□□□ 0.02
AFF3-202ENST00000409236 CHGBP05060 677 aa15.15■□□□□ 0.02
AFF3-202ENST00000409236 IFNA8P32881 189 aa15.15■□□□□ 0.02
AFF3-202ENST00000409236 PRPSAP1Q14558 356 aa15.15■□□□□ 0.02
AFF3-202ENST00000409236 TSC22D4Q9Y3Q8 395 aa15.15■□□□□ 0.02
AFF3-202ENST00000409236 TEDDM1Q5T9Z0 273 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms