RNA–Protein interactions for RNA: ENST00000406768.1

PSEN1-205, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 4,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-205ENST00000406768 KCNV2Q8TDN2 545 aa10.07□□□□□ -0.8
PSEN1-205ENST00000406768 SRGAP2O75044 1071 aa10.07□□□□□ -0.8
PSEN1-205ENST00000406768 MFSD4BQ5TF39 518 aa10.07□□□□□ -0.8
PSEN1-205ENST00000406768 TEX9Q8N6V9 391 aa10.07□□□□□ -0.8
PSEN1-205ENST00000406768 LTV1Q96GA3 475 aaPredicted RBP10.07□□□□□ -0.8
PSEN1-205ENST00000406768 SYNMO15061 1565 aa10.07□□□□□ -0.8
PSEN1-205ENST00000406768 ATP2A2P16615 1042 aaKnown RBP10.07□□□□□ -0.8
PSEN1-205ENST00000406768 TAF7Q15545 349 aaPredicted RBP10.07□□□□□ -0.8
PSEN1-205ENST00000406768 SPATA24Q86W54 205 aa10.07□□□□□ -0.8
PSEN1-205ENST00000406768 CYFIP2Q96F07 1278 aa10.07□□□□□ -0.8
PSEN1-205ENST00000406768 TRIM47Q96LD4 638 aa10.07□□□□□ -0.8
PSEN1-205ENST00000406768 HYOU1Q9Y4L1 999 aa10.07□□□□□ -0.8
PSEN1-205ENST00000406768 E9PCH4 1651 aa10.06□□□□□ -0.8
PSEN1-205ENST00000406768 HNRNPCP07910 306 aaKnown RBP eCLIP10.06□□□□□ -0.8
PSEN1-205ENST00000406768 SKIP12755 728 aa10.06□□□□□ -0.8
PSEN1-205ENST00000406768 ATP5JP18859 108 aa10.06□□□□□ -0.8
PSEN1-205ENST00000406768 SESN3P58005 492 aa10.06□□□□□ -0.8
PSEN1-205ENST00000406768 RNASE9P60153 205 aaKnown RBP10.06□□□□□ -0.8
PSEN1-205ENST00000406768 MRPS35P82673 323 aaKnown RBP10.06□□□□□ -0.8
PSEN1-205ENST00000406768 DIXDC1Q155Q3 683 aa10.06□□□□□ -0.8
PSEN1-205ENST00000406768 ZNF827Q17R98 1081 aa10.06□□□□□ -0.8
PSEN1-205ENST00000406768 MAP7D1Q3KQU3 841 aa10.06□□□□□ -0.8
PSEN1-205ENST00000406768 KIAA0825Q8IV33 1275 aa10.06□□□□□ -0.8
PSEN1-205ENST00000406768 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.06□□□□□ -0.8
PSEN1-205ENST00000406768 MYCBPAPQ8TBZ2 947 aa10.06□□□□□ -0.8
PSEN1-205ENST00000406768 STAMBPL1Q96FJ0 436 aa10.06□□□□□ -0.8
PSEN1-205ENST00000406768 ZMAT2Q96NC0 199 aaKnown RBP10.06□□□□□ -0.8
PSEN1-205ENST00000406768 ABCF2Q9UG63 623 aa10.06□□□□□ -0.8
PSEN1-205ENST00000406768 CLIC4Q9Y696 253 aa10.06□□□□□ -0.8
PSEN1-205ENST00000406768 CEP152O94986 1710 aa10.06□□□□□ -0.8
PSEN1-205ENST00000406768 POLR2DO15514 142 aaKnown RBP10.06□□□□□ -0.8
PSEN1-205ENST00000406768 ROR2Q01974 943 aaKnown RBP10.06□□□□□ -0.8
PSEN1-205ENST00000406768 PTGISQ16647 500 aa10.06□□□□□ -0.8
PSEN1-205ENST00000406768 DAAM2Q86T65 1068 aa10.06□□□□□ -0.8
PSEN1-205ENST00000406768 LINC00301Q8NCQ3 95 aa10.06□□□□□ -0.8
PSEN1-205ENST00000406768 FAXDC2Q96IV6 333 aa10.06□□□□□ -0.8
PSEN1-205ENST00000406768 EPB41L5Q9HCM4 733 aa10.06□□□□□ -0.8
PSEN1-205ENST00000406768 EMILIN1Q9Y6C2 1016 aa10.06□□□□□ -0.8
PSEN1-205ENST00000406768 FYB1O15117 783 aa10.06□□□□□ -0.8
PSEN1-205ENST00000406768 IARSP41252 1262 aaKnown RBP10.06□□□□□ -0.8
PSEN1-205ENST00000406768 YTHDF3Q7Z739 585 aaKnown RBP10.06□□□□□ -0.8
PSEN1-205ENST00000406768 KLHL7Q8IXQ5 586 aa10.06□□□□□ -0.8
PSEN1-205ENST00000406768 FAM81AQ8TBF8 368 aa10.06□□□□□ -0.8
PSEN1-205ENST00000406768 CDK5RAP3Q96JB5 506 aa10.06□□□□□ -0.8
PSEN1-205ENST00000406768 DDX21Q9NR30 783 aaKnown RBP eCLIP10.06□□□□□ -0.8
PSEN1-205ENST00000406768 TAB2Q9NYJ8 693 aa10.06□□□□□ -0.8
PSEN1-205ENST00000406768 CCND1P24385 295 aa10.05□□□□□ -0.8
PSEN1-205ENST00000406768 ALDH3A1P30838 453 aa10.05□□□□□ -0.8
PSEN1-205ENST00000406768 TBC1D8BQ0IIM8 1120 aa10.05□□□□□ -0.8
PSEN1-205ENST00000406768 TMED1Q13445 227 aa10.05□□□□□ -0.8
PSEN1-205ENST00000406768 CHST3Q7LGC8 479 aa10.05□□□□□ -0.8
PSEN1-205ENST00000406768 EZH1Q92800 747 aaPredicted RBP10.05□□□□□ -0.8
PSEN1-205ENST00000406768 ARHGEF2Q92974 986 aaKnown RBP10.05□□□□□ -0.8
PSEN1-205ENST00000406768 ATP6V1G3Q96LB4 118 aa10.05□□□□□ -0.8
PSEN1-205ENST00000406768 C15orf41Q9Y2V0 281 aa10.05□□□□□ -0.8
PSEN1-205ENST00000406768 LAMC1P11047 1609 aa10.05□□□□□ -0.8
PSEN1-205ENST00000406768 hCG_2014768A0A024R1R8 64 aa10.05□□□□□ -0.8
PSEN1-205ENST00000406768 TPD52L2O43399 206 aaKnown RBP10.05□□□□□ -0.8
PSEN1-205ENST00000406768 MFAP3LO75121 409 aa10.05□□□□□ -0.8
PSEN1-205ENST00000406768 SUN1O94901 812 aa10.05□□□□□ -0.8
PSEN1-205ENST00000406768 HEXIM1O94992 359 aaKnown RBP10.05□□□□□ -0.8
PSEN1-205ENST00000406768 SYF2O95926 243 aaKnown RBP10.05□□□□□ -0.8
PSEN1-205ENST00000406768 MRPS25P82663 173 aaKnown RBP10.05□□□□□ -0.8
PSEN1-205ENST00000406768 KLC1Q07866 573 aa10.05□□□□□ -0.8
PSEN1-205ENST00000406768 RRS1Q15050 365 aaKnown RBP10.05□□□□□ -0.8
PSEN1-205ENST00000406768 AMOTQ4VCS5 1084 aa10.05□□□□□ -0.8
PSEN1-205ENST00000406768 G2E3Q7L622 706 aa10.05□□□□□ -0.8
PSEN1-205ENST00000406768 FNBP4Q8N3X1 1017 aaPredicted RBP10.05□□□□□ -0.8
PSEN1-205ENST00000406768 RNPC3Q96LT9 517 aaKnown RBP10.05□□□□□ -0.8
PSEN1-205ENST00000406768 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.05□□□□□ -0.8
PSEN1-205ENST00000406768 TRIM42Q8IWZ5 723 aa10.05□□□□□ -0.8
PSEN1-205ENST00000406768 ENOX1Q8TC92 643 aaKnown RBP10.05□□□□□ -0.8
PSEN1-205ENST00000406768 TAOK3Q9H2K8 898 aa10.05□□□□□ -0.8
PSEN1-205ENST00000406768 KCNK9Q9NPC2 374 aa10.05□□□□□ -0.8
PSEN1-205ENST00000406768 SCTRP47872 440 aa10.04□□□□□ -0.8
PSEN1-205ENST00000406768 SPATA21Q7Z572 469 aa10.04□□□□□ -0.8
PSEN1-205ENST00000406768 APLFQ8IW19 511 aaPredicted RBP10.04□□□□□ -0.8
PSEN1-205ENST00000406768 TC2NQ8N9U0 490 aa10.04□□□□□ -0.8
PSEN1-205ENST00000406768 HAUS1Q96CS2 278 aa10.04□□□□□ -0.8
PSEN1-205ENST00000406768 SEC16BQ96JE7 1060 aa10.04□□□□□ -0.8
PSEN1-205ENST00000406768 MMS19Q96T76 1030 aa10.04□□□□□ -0.8
PSEN1-205ENST00000406768 HDAC6Q9UBN7 1215 aa10.04□□□□□ -0.8
PSEN1-205ENST00000406768 ERBB3P21860 1342 aa10.04□□□□□ -0.8
PSEN1-205ENST00000406768 ATP6V1G2O95670 118 aa10.04□□□□□ -0.8
PSEN1-205ENST00000406768 KRT14P02533 472 aa10.04□□□□□ -0.8
PSEN1-205ENST00000406768 PSMC4P43686 418 aa10.04□□□□□ -0.8
PSEN1-205ENST00000406768 RASSF2P50749 326 aa10.04□□□□□ -0.8
PSEN1-205ENST00000406768 SPATA1Q5VX52 437 aa10.04□□□□□ -0.8
PSEN1-205ENST00000406768 MAP4K1Q92918 833 aa10.04□□□□□ -0.8
PSEN1-205ENST00000406768 SAMSN1Q9NSI8 373 aaKnown RBP10.04□□□□□ -0.8
PSEN1-205ENST00000406768 RMND1Q9NWS8 449 aa10.04□□□□□ -0.8
PSEN1-205ENST00000406768 CTTNBP2NLQ9P2B4 639 aa10.04□□□□□ -0.8
PSEN1-205ENST00000406768 KLHL14Q9P2G3 628 aa10.04□□□□□ -0.8
PSEN1-205ENST00000406768 NFU1Q9UMS0 254 aa10.04□□□□□ -0.8
PSEN1-205ENST00000406768 NOVA2Q9UNW9 492 aaKnown RBP10.04□□□□□ -0.8
PSEN1-205ENST00000406768 TRIM37O94972 964 aa10.04□□□□□ -0.8
PSEN1-205ENST00000406768 NDUFA10O95299 355 aa10.04□□□□□ -0.8
PSEN1-205ENST00000406768 MYBL1P10243 752 aa10.04□□□□□ -0.8
PSEN1-205ENST00000406768 INF2Q27J81 1249 aa10.04□□□□□ -0.8
PSEN1-205ENST00000406768 MCMDC2Q4G0Z9 681 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms