RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 MCM9Q9NXL9 1143 aa17.01■□□□□ 0.31
ATG4B-206ENST00000405546 DACH1Q9UI36 760 aa17.01■□□□□ 0.31
ATG4B-206ENST00000405546 PKD1L3Q7Z443 1732 aa17.01■□□□□ 0.31
ATG4B-206ENST00000405546 EARS2Q5JPH6 523 aaKnown RBP17.01■□□□□ 0.31
ATG4B-206ENST00000405546 JAKMIP3Q5VZ66 844 aa17.01■□□□□ 0.31
ATG4B-206ENST00000405546 PLIN2Q99541 437 aa17.01■□□□□ 0.31
ATG4B-206ENST00000405546 HSD3B7Q9H2F3 369 aa17.01■□□□□ 0.31
ATG4B-206ENST00000405546 ANKIB1Q9P2G1 1089 aa17.01■□□□□ 0.31
ATG4B-206ENST00000405546 FBXO2Q9UK22 296 aaPredicted RBP17.01■□□□□ 0.31
ATG4B-206ENST00000405546 EIF3CLB5ME19 914 aaKnown RBP17.01■□□□□ 0.31
ATG4B-206ENST00000405546 ZSCAN12O43309 604 aa17.01■□□□□ 0.31
ATG4B-206ENST00000405546 DZIP1Q86YF9 867 aaKnown RBP17.01■□□□□ 0.31
ATG4B-206ENST00000405546 RIN2Q8WYP3 895 aaPredicted RBP17.01■□□□□ 0.31
ATG4B-206ENST00000405546 EIF3CQ99613 913 aaKnown RBP17.01■□□□□ 0.31
ATG4B-206ENST00000405546 SRP68Q9UHB9 627 aaKnown RBP17.01■□□□□ 0.31
ATG4B-206ENST00000405546 MINPP1Q9UNW1 487 aa17.01■□□□□ 0.31
ATG4B-206ENST00000405546 ZMYND10O75800 440 aa17■□□□□ 0.31
ATG4B-206ENST00000405546 PRDX5P30044 214 aa17■□□□□ 0.31
ATG4B-206ENST00000405546 CHMP4BP1P59074 171 aa17■□□□□ 0.31
ATG4B-206ENST00000405546 FKBP15Q5T1M5 1219 aa17■□□□□ 0.31
ATG4B-206ENST00000405546 NLRP3Q96P20 1036 aa17■□□□□ 0.31
ATG4B-206ENST00000405546 JRKLQ9Y4A0 524 aa17■□□□□ 0.31
ATG4B-206ENST00000405546 PLEKHG2Q9H7P9 1386 aa17■□□□□ 0.31
ATG4B-206ENST00000405546 ABL1P00519 1130 aa17■□□□□ 0.31
ATG4B-206ENST00000405546 USP5P45974 858 aa17■□□□□ 0.31
ATG4B-206ENST00000405546 KIF4BQ2VIQ3 1234 aa17■□□□□ 0.31
ATG4B-206ENST00000405546 ICE2Q659A1 982 aa17■□□□□ 0.31
ATG4B-206ENST00000405546 EP400NLQ6ZTU2 488 aa17■□□□□ 0.31
ATG4B-206ENST00000405546 GOLGA6L1Q8N7Z2 621 aa17■□□□□ 0.31
ATG4B-206ENST00000405546 SYMPKQ92797 1274 aaKnown RBP17■□□□□ 0.31
ATG4B-206ENST00000405546 SETDB2Q96T68 719 aa17■□□□□ 0.31
ATG4B-206ENST00000405546 FAM84BQ96KN1 310 aaPredicted RBP16.99■□□□□ 0.31
ATG4B-206ENST00000405546 MRFAP1Q9Y605 127 aa16.99■□□□□ 0.31
ATG4B-206ENST00000405546 ZPR1O75312 459 aa16.99■□□□□ 0.31
ATG4B-206ENST00000405546 ZNF569Q5MCW4 686 aa16.99■□□□□ 0.31
ATG4B-206ENST00000405546 PPFIBP1Q86W92 1011 aa16.99■□□□□ 0.31
ATG4B-206ENST00000405546 MKNK2Q9HBH9 465 aa16.99■□□□□ 0.31
ATG4B-206ENST00000405546 HIBADHP31937 336 aaKnown RBP16.99■□□□□ 0.31
ATG4B-206ENST00000405546 CCT6AP40227 531 aaKnown RBP16.99■□□□□ 0.31
ATG4B-206ENST00000405546 RPS8P62241 208 aaKnown RBP16.99■□□□□ 0.31
ATG4B-206ENST00000405546 MAP3K9P80192 1104 aa16.99■□□□□ 0.31
ATG4B-206ENST00000405546 PTGDRQ13258 359 aa16.99■□□□□ 0.31
ATG4B-206ENST00000405546 VSTM4Q8IW00 320 aa16.99■□□□□ 0.31
ATG4B-206ENST00000405546 INTS13Q9NVM9 706 aa16.99■□□□□ 0.31
ATG4B-206ENST00000405546 STX8Q9UNK0 236 aa16.99■□□□□ 0.31
ATG4B-206ENST00000405546 TTC19Q6DKK2 380 aaPredicted RBP16.98■□□□□ 0.31
ATG4B-206ENST00000405546 MICALL1Q8N3F8 863 aa16.98■□□□□ 0.31
ATG4B-206ENST00000405546 CRNKL1Q9BZJ0 848 aaKnown RBP16.98■□□□□ 0.31
ATG4B-206ENST00000405546 POLD4Q9HCU8 107 aa16.98■□□□□ 0.31
ATG4B-206ENST00000405546 SRPRBQ9Y5M8 271 aaKnown RBP16.98■□□□□ 0.31
ATG4B-206ENST00000405546 MECOMQ03112 1051 aa16.98■□□□□ 0.31
ATG4B-206ENST00000405546 MLKLQ8NB16 471 aa16.98■□□□□ 0.31
ATG4B-206ENST00000405546 PNPLA7Q6ZV29 1317 aa16.98■□□□□ 0.31
ATG4B-206ENST00000405546 RTL9Q8NET4 1388 aa16.98■□□□□ 0.31
ATG4B-206ENST00000405546 PARP4Q9UKK3 1724 aaKnown RBP16.98■□□□□ 0.31
ATG4B-206ENST00000405546 TJP1Q07157 1748 aa16.97■□□□□ 0.31
ATG4B-206ENST00000405546 TXLNAP40222 546 aa16.97■□□□□ 0.31
ATG4B-206ENST00000405546 RASGRP4Q8TDF6 673 aa16.97■□□□□ 0.31
ATG4B-206ENST00000405546 EXOC4Q96A65 974 aa16.97■□□□□ 0.31
ATG4B-206ENST00000405546 LAMB4A4D0S4 1761 aa16.97■□□□□ 0.31
ATG4B-206ENST00000405546 STK36Q9NRP7 1315 aa16.97■□□□□ 0.31
ATG4B-206ENST00000405546 DHX8Q14562 1220 aaKnown RBP16.97■□□□□ 0.31
ATG4B-206ENST00000405546 TTC38Q5R3I4 469 aa16.97■□□□□ 0.31
ATG4B-206ENST00000405546 TBC1D9BQ66K14 1250 aa16.97■□□□□ 0.31
ATG4B-206ENST00000405546 KANK3Q6NY19 840 aa16.97■□□□□ 0.31
ATG4B-206ENST00000405546 CTR9Q6PD62 1173 aa16.97■□□□□ 0.31
ATG4B-206ENST00000405546 GPKOWQ92917 476 aaPredicted RBP eCLIP16.97■□□□□ 0.313e-7■□□□□ 9.2
ATG4B-206ENST00000405546 EEF2KMTQ96G04 330 aa16.97■□□□□ 0.31
ATG4B-206ENST00000405546 RNF26Q9BY78 433 aaPredicted RBP16.97■□□□□ 0.31
ATG4B-206ENST00000405546 HSP90B2PQ58FF3 399 aa16.97■□□□□ 0.31
ATG4B-206ENST00000405546 RRAGBQ5VZM2 374 aa16.97■□□□□ 0.31
ATG4B-206ENST00000405546 GNPATO15228 680 aa16.96■□□□□ 0.31
ATG4B-206ENST00000405546 CCP110O43303 1012 aa16.96■□□□□ 0.31
ATG4B-206ENST00000405546 USP17L8P0C7I0 530 aa16.96■□□□□ 0.31
ATG4B-206ENST00000405546 VEGFAP15692 232 aaPredicted RBP16.96■□□□□ 0.31
ATG4B-206ENST00000405546 VSNL1P62760 191 aa16.96■□□□□ 0.31
ATG4B-206ENST00000405546 UBE4AQ14139 1066 aa16.96■□□□□ 0.31
ATG4B-206ENST00000405546 SPECC1LQ69YQ0 1117 aa16.96■□□□□ 0.31
ATG4B-206ENST00000405546 UBXN6Q9BZV1 441 aa16.96■□□□□ 0.31
ATG4B-206ENST00000405546 EFCC1Q9HA90 598 aa16.96■□□□□ 0.31
ATG4B-206ENST00000405546 VAT1LQ9HCJ6 419 aa16.96■□□□□ 0.31
ATG4B-206ENST00000405546 GLI3P10071 1580 aa16.96■□□□□ 0.31
ATG4B-206ENST00000405546 WNT7AO00755 349 aa16.96■□□□□ 0.31
ATG4B-206ENST00000405546 ARHGAP6O43182 974 aa16.96■□□□□ 0.31
ATG4B-206ENST00000405546 TPM1P09493 284 aa16.96■□□□□ 0.31
ATG4B-206ENST00000405546 GSPT2Q8IYD1 628 aaKnown RBP16.96■□□□□ 0.31
ATG4B-206ENST00000405546 SECISBP2LQ93073 1101 aaKnown RBP16.96■□□□□ 0.31
ATG4B-206ENST00000405546 GPR101Q96P66 508 aaPredicted RBP16.96■□□□□ 0.31
ATG4B-206ENST00000405546 KAT14Q9H8E8 782 aa16.96■□□□□ 0.31
ATG4B-206ENST00000405546 TEX33O43247 280 aa16.95■□□□□ 0.3
ATG4B-206ENST00000405546 FILIP1LQ4L180 1135 aa16.95■□□□□ 0.3
ATG4B-206ENST00000405546 RSRC2Q7L4I2 434 aaKnown RBP16.95■□□□□ 0.3
ATG4B-206ENST00000405546 NGLY1Q96IV0 654 aa16.95■□□□□ 0.3
ATG4B-206ENST00000405546 FAM204AQ9H8W3 233 aa16.95■□□□□ 0.3
ATG4B-206ENST00000405546 LIG3P49916 1009 aa16.95■□□□□ 0.3
ATG4B-206ENST00000405546 MRPS25P82663 173 aaKnown RBP16.95■□□□□ 0.3
ATG4B-206ENST00000405546 TFAP4Q01664 338 aa16.95■□□□□ 0.3
ATG4B-206ENST00000405546 DNAJC21Q5F1R6 531 aaKnown RBP16.95■□□□□ 0.3
ATG4B-206ENST00000405546 PTF1AQ7RTS3 328 aa16.95■□□□□ 0.3
ATG4B-206ENST00000405546 RABGGTAQ92696 567 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms