RNA–Protein interactions for RNA: ENST00000405025.5

HDAC11-206, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-206ENST00000405025 ATP2B2Q01814 1243 aa31.38■■■□□ 2.61
HDAC11-206ENST00000405025 NMIQ13287 307 aaPredicted RBP31.38■■■□□ 2.61
HDAC11-206ENST00000405025 MTFR1Q15390 333 aa31.38■■■□□ 2.61
HDAC11-206ENST00000405025 SPICE1Q8N0Z3 855 aa31.38■■■□□ 2.61
HDAC11-206ENST00000405025 GTF3C2Q8WUA4 911 aaPredicted RBP31.38■■■□□ 2.61
HDAC11-206ENST00000405025 KANSL2Q9H9L4 492 aa31.38■■■□□ 2.61
HDAC11-206ENST00000405025 SPDYE16A6NNV3 312 aaPredicted RBP31.37■■■□□ 2.61
HDAC11-206ENST00000405025 ELNP15502 786 aa31.37■■■□□ 2.61
HDAC11-206ENST00000405025 PDE4AP27815 886 aa31.37■■■□□ 2.61
HDAC11-206ENST00000405025 PORCNQ9H237 461 aa31.37■■■□□ 2.61
HDAC11-206ENST00000405025 VCPKMTQ9H867 229 aa31.37■■■□□ 2.61
HDAC11-206ENST00000405025 TNRC18O15417 2968 aaPredicted RBP31.36■■■□□ 2.61
HDAC11-206ENST00000405025 ADCY3O60266 1144 aa31.36■■■□□ 2.61
HDAC11-206ENST00000405025 EN2P19622 333 aaPredicted RBP31.36■■■□□ 2.61
HDAC11-206ENST00000405025 PPARAQ07869 468 aa31.36■■■□□ 2.61
HDAC11-206ENST00000405025 IRF5Q13568 498 aa31.36■■■□□ 2.61
HDAC11-206ENST00000405025 TANGO6Q9C0B7 1094 aa31.36■■■□□ 2.61
HDAC11-206ENST00000405025 SH2D4AQ9H788 454 aa31.36■■■□□ 2.61
HDAC11-206ENST00000405025 BRCA2P51587 3418 aa31.35■■■□□ 2.61
HDAC11-206ENST00000405025 ZNF589Q86UQ0 364 aaPredicted RBP31.35■■■□□ 2.61
HDAC11-206ENST00000405025 SLAIN1Q8ND83 568 aa31.35■■■□□ 2.61
HDAC11-206ENST00000405025 TMEM106CQ9BVX2 250 aa31.35■■■□□ 2.61
HDAC11-206ENST00000405025 BTBD7Q9P203 1132 aa31.35■■■□□ 2.61
HDAC11-206ENST00000405025 GJD2Q9UKL4 321 aa31.35■■■□□ 2.61
HDAC11-206ENST00000405025 RABGAP1Q9Y3P9 1069 aa31.35■■■□□ 2.61
HDAC11-206ENST00000405025 PARP14Q460N5 1801 aa31.35■■■□□ 2.61
HDAC11-206ENST00000405025 MCMDC2Q4G0Z9 681 aa31.34■■■□□ 2.61
HDAC11-206ENST00000405025 LBX2Q6XYB7 198 aa31.34■■■□□ 2.61
HDAC11-206ENST00000405025 LPAR1Q92633 364 aa31.34■■■□□ 2.61
HDAC11-206ENST00000405025 A0A0G2JMZ2 1700 aa31.34■■■□□ 2.61
HDAC11-206ENST00000405025 BIN2Q9UBW5 565 aaPredicted RBP31.33■■■□□ 2.61
HDAC11-206ENST00000405025 IGKV6D-41A0A0C4DH26 115 aa31.32■■■□□ 2.6
HDAC11-206ENST00000405025 SDSP20132 328 aa31.32■■■□□ 2.6
HDAC11-206ENST00000405025 TICAM2Q86XR7 235 aa31.32■■■□□ 2.6
HDAC11-206ENST00000405025 TACC3Q9Y6A5 838 aa31.32■■■□□ 2.6
HDAC11-206ENST00000405025 CTDSPL2Q05D32 466 aa31.31■■■□□ 2.6
HDAC11-206ENST00000405025 COG2Q14746 738 aa31.31■■■□□ 2.6
HDAC11-206ENST00000405025 ZNF444Q8N0Y2 327 aaPredicted RBP31.31■■■□□ 2.6
HDAC11-206ENST00000405025 PXYLP1Q8TE99 480 aa31.31■■■□□ 2.6
HDAC11-206ENST00000405025 INCENPQ9NQS7 918 aa31.31■■■□□ 2.6
HDAC11-206ENST00000405025 MYH4Q9Y623 1939 aa31.3■■■□□ 2.6
HDAC11-206ENST00000405025 WDR46O15213 610 aaKnown RBP31.3■■■□□ 2.6
HDAC11-206ENST00000405025 INHAP05111 366 aa31.3■■■□□ 2.6
HDAC11-206ENST00000405025 MAPK4P31152 587 aa31.3■■■□□ 2.6
HDAC11-206ENST00000405025 ZNF287Q9HBT7 754 aa31.3■■■□□ 2.6
HDAC11-206ENST00000405025 CCL5P13501 91 aa31.29■■■□□ 2.6
HDAC11-206ENST00000405025 PDE4BQ07343 736 aa31.29■■■□□ 2.6
HDAC11-206ENST00000405025 FAM47AQ5JRC9 791 aa31.29■■■□□ 2.6
HDAC11-206ENST00000405025 GPR142Q7Z601 462 aa31.29■■■□□ 2.6
HDAC11-206ENST00000405025 NYAP2Q9P242 653 aa31.29■■■□□ 2.6
HDAC11-206ENST00000405025 DDX52Q9Y2R4 599 aaKnown RBP eCLIP31.29■■■□□ 2.6
HDAC11-206ENST00000405025 PLIN4Q96Q06 1357 aa31.29■■■□□ 2.6
HDAC11-206ENST00000405025 CCDC171Q6TFL3 1326 aa31.28■■■□□ 2.6
HDAC11-206ENST00000405025 RAD21O60216 631 aa31.28■■■□□ 2.6
HDAC11-206ENST00000405025 FLOT1O75955 427 aa31.28■■■□□ 2.6
HDAC11-206ENST00000405025 SLC3A2P08195 630 aaKnown RBP31.28■■■□□ 2.6
HDAC11-206ENST00000405025 UBXN2AP68543 259 aa31.28■■■□□ 2.6
HDAC11-206ENST00000405025 ALX1Q15699 326 aa31.28■■■□□ 2.6
HDAC11-206ENST00000405025 ATG4CQ96DT6 458 aa31.28■■■□□ 2.6
HDAC11-206ENST00000405025 CEP95Q96GE4 821 aa31.28■■■□□ 2.6
HDAC11-206ENST00000405025 UNC93B1Q9H1C4 597 aa31.28■■■□□ 2.6
HDAC11-206ENST00000405025 GOPCQ9HD26 462 aa31.28■■■□□ 2.6
HDAC11-206ENST00000405025 HSPD1P10809 573 aaKnown RBP31.27■■■□□ 2.6
HDAC11-206ENST00000405025 DSG3P32926 999 aa31.27■■■□□ 2.6
HDAC11-206ENST00000405025 SAMD1Q6SPF0 538 aaPredicted RBP31.27■■■□□ 2.6
HDAC11-206ENST00000405025 PLEKHH3Q7Z736 793 aa31.27■■■□□ 2.6
HDAC11-206ENST00000405025 CCAR1Q8IX12 1150 aaKnown RBP31.27■■■□□ 2.6
HDAC11-206ENST00000405025 FBXO28Q9NVF7 368 aa31.27■■■□□ 2.6
HDAC11-206ENST00000405025 HOXC10Q9NYD6 342 aa31.27■■■□□ 2.6
HDAC11-206ENST00000405025 FGAP02671 866 aa31.26■■■□□ 2.59
HDAC11-206ENST00000405025 CYP2B6P20813 491 aa31.26■■■□□ 2.59
HDAC11-206ENST00000405025 CCNA1P78396 465 aa31.26■■■□□ 2.59
HDAC11-206ENST00000405025 TFAP4Q01664 338 aa31.26■■■□□ 2.59
HDAC11-206ENST00000405025 FAM83BQ5T0W9 1011 aa31.26■■■□□ 2.59
HDAC11-206ENST00000405025 NEDD1Q8NHV4 660 aa31.26■■■□□ 2.59
HDAC11-206ENST00000405025 NUP88Q99567 741 aaPredicted RBP31.26■■■□□ 2.59
HDAC11-206ENST00000405025 NUDT12Q9BQG2 462 aa31.26■■■□□ 2.59
HDAC11-206ENST00000405025 MTMR4Q9NYA4 1195 aa31.26■■■□□ 2.59
HDAC11-206ENST00000405025 CLIP2Q9UDT6 1046 aa31.26■■■□□ 2.59
HDAC11-206ENST00000405025 ANAPC4Q9UJX5 808 aa31.26■■■□□ 2.59
HDAC11-206ENST00000405025 TSPY3P0CV98 308 aa31.25■■■□□ 2.59
HDAC11-206ENST00000405025 TSPY8P0CW00 308 aa31.25■■■□□ 2.59
HDAC11-206ENST00000405025 GSPT1P15170 499 aaKnown RBP31.25■■■□□ 2.59
HDAC11-206ENST00000405025 MORN1Q5T089 497 aa31.25■■■□□ 2.59
HDAC11-206ENST00000405025 SOCS4Q8WXH5 440 aa31.25■■■□□ 2.59
HDAC11-206ENST00000405025 USP6NLQ92738 828 aa31.25■■■□□ 2.59
HDAC11-206ENST00000405025 SHISA4Q96DD7 197 aa31.25■■■□□ 2.59
HDAC11-206ENST00000405025 RNF208Q9H0X6 261 aa31.25■■■□□ 2.59
HDAC11-206ENST00000405025 COL11A1P12107 1806 aaPredicted RBP31.25■■■□□ 2.59
HDAC11-206ENST00000405025 NDUFB10O96000 172 aa31.24■■■□□ 2.59
HDAC11-206ENST00000405025 TRIM32Q13049 653 aa31.24■■■□□ 2.59
HDAC11-206ENST00000405025 WDR78Q5VTH9 848 aa31.24■■■□□ 2.59
HDAC11-206ENST00000405025 CWC27Q6UX04 472 aaKnown RBP31.24■■■□□ 2.59
HDAC11-206ENST00000405025 TRIB2Q92519 343 aa31.24■■■□□ 2.59
HDAC11-206ENST00000405025 DIAPH3Q9NSV4 1193 aa31.24■■■□□ 2.59
HDAC11-206ENST00000405025 TTC22Q5TAA0 569 aa31.23■■■□□ 2.59
HDAC11-206ENST00000405025 LRRC47Q8N1G4 583 aaKnown RBP31.23■■■□□ 2.59
HDAC11-206ENST00000405025 MOV10L1Q9BXT6 1211 aaKnown RBP31.23■■■□□ 2.59
HDAC11-206ENST00000405025 CWC22Q9HCG8 908 aaKnown RBP31.23■■■□□ 2.59
HDAC11-206ENST00000405025 F5H6K3 240 aa31.22■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms