RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 FAM207AQ9NSI2 230 aaPredicted RBP8.24□□□□□ -1.09
HDAC9-202ENST00000405010 SWAP70Q9UH65 585 aa8.24□□□□□ -1.09
HDAC9-202ENST00000405010 TUBE1Q9UJT0 475 aa8.24□□□□□ -1.09
HDAC9-202ENST00000405010 ADGRL3Q9HAR2 1447 aa8.24□□□□□ -1.09
HDAC9-202ENST00000405010 SLC7A5Q01650 507 aa8.24□□□□□ -1.09
HDAC9-202ENST00000405010 SF3B2Q13435 895 aaKnown RBP8.24□□□□□ -1.09
HDAC9-202ENST00000405010 USPL1Q5W0Q7 1092 aa8.24□□□□□ -1.09
HDAC9-202ENST00000405010 RAD9BQ6WBX8 426 aa8.24□□□□□ -1.09
HDAC9-202ENST00000405010 METTL16Q86W50 562 aaKnown RBP8.24□□□□□ -1.09
HDAC9-202ENST00000405010 IL17RAQ96F46 866 aa8.24□□□□□ -1.09
HDAC9-202ENST00000405010 RAB34Q9BZG1 259 aa8.24□□□□□ -1.09
HDAC9-202ENST00000405010 TAOK3Q9H2K8 898 aa8.24□□□□□ -1.09
HDAC9-202ENST00000405010 KAT14Q9H8E8 782 aa8.24□□□□□ -1.09
HDAC9-202ENST00000405010 VIPAS39Q9H9C1 493 aa8.24□□□□□ -1.09
HDAC9-202ENST00000405010 KCND1Q9NSA2 647 aa8.24□□□□□ -1.09
HDAC9-202ENST00000405010 HDAC6Q9UBN7 1215 aa8.24□□□□□ -1.09
HDAC9-202ENST00000405010 PRR36Q9H6K5 1346 aa8.24□□□□□ -1.09
HDAC9-202ENST00000405010 CALML3P27482 149 aa8.24□□□□□ -1.09
HDAC9-202ENST00000405010 LACTBP83111 547 aaPredicted RBP8.24□□□□□ -1.09
HDAC9-202ENST00000405010 PDE4DQ08499 809 aa8.24□□□□□ -1.09
HDAC9-202ENST00000405010 KRT31Q15323 416 aa8.24□□□□□ -1.09
HDAC9-202ENST00000405010 TCERG1LQ5VWI1 586 aa8.24□□□□□ -1.09
HDAC9-202ENST00000405010 PIK3AP1Q6ZUJ8 805 aa8.24□□□□□ -1.09
HDAC9-202ENST00000405010 MAGEB6Q8N7X4 407 aa8.24□□□□□ -1.09
HDAC9-202ENST00000405010 SYMPKQ92797 1274 aaKnown RBP8.24□□□□□ -1.09
HDAC9-202ENST00000405010 OSBP2Q969R2 916 aa8.24□□□□□ -1.09
HDAC9-202ENST00000405010 TRMT112Q9UI30 125 aaKnown RBP8.24□□□□□ -1.09
HDAC9-202ENST00000405010 RTL9Q8NET4 1388 aa8.24□□□□□ -1.09
HDAC9-202ENST00000405010 ERCC6L2Q5T890 1561 aa8.24□□□□□ -1.09
HDAC9-202ENST00000405010 MED23Q9ULK4 1368 aa8.23□□□□□ -1.09
HDAC9-202ENST00000405010 KIF28PB7ZC32 967 aa8.23□□□□□ -1.09
HDAC9-202ENST00000405010 KIF1CO43896 1103 aaKnown RBP8.23□□□□□ -1.09
HDAC9-202ENST00000405010 ZPR1O75312 459 aa8.23□□□□□ -1.09
HDAC9-202ENST00000405010 CTDNEP1O95476 244 aa8.23□□□□□ -1.09
HDAC9-202ENST00000405010 CTNNA1P35221 906 aaKnown RBP8.23□□□□□ -1.09
HDAC9-202ENST00000405010 CYP27A1Q02318 531 aa8.23□□□□□ -1.09
HDAC9-202ENST00000405010 PTPN12Q05209 780 aaKnown RBP8.23□□□□□ -1.09
HDAC9-202ENST00000405010 CTDSPL2Q05D32 466 aa8.23□□□□□ -1.09
HDAC9-202ENST00000405010 NCAPHQ15003 741 aa8.23□□□□□ -1.09
HDAC9-202ENST00000405010 TMEM266Q2M3C6 531 aa8.23□□□□□ -1.09
HDAC9-202ENST00000405010 ALS2CLQ60I27 953 aa8.23□□□□□ -1.09
HDAC9-202ENST00000405010 FOXR1Q6PIV2 292 aa8.23□□□□□ -1.09
HDAC9-202ENST00000405010 FNBP4Q8N3X1 1017 aaPredicted RBP8.23□□□□□ -1.09
HDAC9-202ENST00000405010 TBC1D31Q96DN5 1066 aa8.23□□□□□ -1.09
HDAC9-202ENST00000405010 ABHD10Q9NUJ1 306 aa8.23□□□□□ -1.09
HDAC9-202ENST00000405010 TSPY2A6NKD2 308 aa8.23□□□□□ -1.09
HDAC9-202ENST00000405010 M0R2C6 588 aa8.23□□□□□ -1.09
HDAC9-202ENST00000405010 CHGBP05060 677 aa8.23□□□□□ -1.09
HDAC9-202ENST00000405010 CLTAP09496 248 aa8.23□□□□□ -1.09
HDAC9-202ENST00000405010 NR1D1P20393 614 aa8.23□□□□□ -1.09
HDAC9-202ENST00000405010 CXCR5P32302 372 aa8.23□□□□□ -1.09
HDAC9-202ENST00000405010 IRAK1P51617 712 aa8.23□□□□□ -1.09
HDAC9-202ENST00000405010 ACTN3Q08043 901 aaPredicted RBP8.23□□□□□ -1.09
HDAC9-202ENST00000405010 NR5A1Q13285 461 aa8.23□□□□□ -1.09
HDAC9-202ENST00000405010 PLBD2Q8NHP8 589 aa8.23□□□□□ -1.09
HDAC9-202ENST00000405010 TSKSQ9UJT2 592 aa8.23□□□□□ -1.09
HDAC9-202ENST00000405010 GSTTP1A0A1W2PQM5 241 aa8.23□□□□□ -1.09
HDAC9-202ENST00000405010 PRAMEF22A3QJZ6 481 aa8.23□□□□□ -1.09
HDAC9-202ENST00000405010 ERCC3P19447 782 aa8.23□□□□□ -1.09
HDAC9-202ENST00000405010 HNRNPH1P31943 449 aaKnown RBP8.23□□□□□ -1.09
HDAC9-202ENST00000405010 FMR1Q06787 632 aaKnown RBP eCLIP8.23□□□□□ -1.09
HDAC9-202ENST00000405010 EMBQ6PCB8 327 aa8.23□□□□□ -1.09
HDAC9-202ENST00000405010 RRAGAQ7L523 313 aa8.23□□□□□ -1.09
HDAC9-202ENST00000405010 MIGA1Q8NAN2 632 aa8.23□□□□□ -1.09
HDAC9-202ENST00000405010 RBM28Q9NW13 759 aaKnown RBP8.23□□□□□ -1.09
HDAC9-202ENST00000405010 SUFUQ9UMX1 484 aa8.23□□□□□ -1.09
HDAC9-202ENST00000405010 GTPBP6O43824 516 aaPredicted RBP8.22□□□□□ -1.09
HDAC9-202ENST00000405010 CEP104O60308 925 aa8.22□□□□□ -1.09
HDAC9-202ENST00000405010 PARP1P09874 1014 aaKnown RBP8.22□□□□□ -1.09
HDAC9-202ENST00000405010 PRR29P0C7W0 189 aa8.22□□□□□ -1.09
HDAC9-202ENST00000405010 CYP7A1P22680 504 aa8.22□□□□□ -1.09
HDAC9-202ENST00000405010 PTPREP23469 700 aa8.22□□□□□ -1.09
HDAC9-202ENST00000405010 IGHMBP2P38935 993 aaKnown RBP8.22□□□□□ -1.09
HDAC9-202ENST00000405010 ZNF496Q96IT1 587 aaPredicted RBP8.22□□□□□ -1.09
HDAC9-202ENST00000405010 TACO1Q9BSH4 297 aaKnown RBP8.22□□□□□ -1.09
HDAC9-202ENST00000405010 EPB41L5Q9HCM4 733 aa8.22□□□□□ -1.09
HDAC9-202ENST00000405010 PCDHB6Q9Y5E3 794 aa8.22□□□□□ -1.09
HDAC9-202ENST00000405010 HEXIM1O94992 359 aaKnown RBP8.22□□□□□ -1.09
HDAC9-202ENST00000405010 CASP1P29466 404 aa8.22□□□□□ -1.09
HDAC9-202ENST00000405010 EXOSC10Q01780 885 aaKnown RBP8.22□□□□□ -1.09
HDAC9-202ENST00000405010 RAPGEF1Q13905 1077 aa8.22□□□□□ -1.09
HDAC9-202ENST00000405010 LRRC24Q50LG9 513 aa8.22□□□□□ -1.09
HDAC9-202ENST00000405010 EPHA10Q5JZY3 1008 aa8.22□□□□□ -1.09
HDAC9-202ENST00000405010 MSANTD4Q8NCY6 345 aa8.22□□□□□ -1.09
HDAC9-202ENST00000405010 HELBQ8NG08 1087 aaPredicted RBP8.22□□□□□ -1.09
HDAC9-202ENST00000405010 TRIM31Q9BZY9 425 aa8.22□□□□□ -1.09
HDAC9-202ENST00000405010 FOXP1Q9H334 677 aaPredicted RBP8.22□□□□□ -1.09
HDAC9-202ENST00000405010 PLEKHG2Q9H7P9 1386 aa8.22□□□□□ -1.09
HDAC9-202ENST00000405010 BUB1O43683 1085 aa8.22□□□□□ -1.09
HDAC9-202ENST00000405010 PDE4BQ07343 736 aa8.22□□□□□ -1.09
HDAC9-202ENST00000405010 CCDC6Q16204 474 aa8.22□□□□□ -1.09
HDAC9-202ENST00000405010 SLC9C1Q4G0N8 1177 aa8.22□□□□□ -1.09
HDAC9-202ENST00000405010 SPTY2D1Q68D10 685 aaPredicted RBP8.22□□□□□ -1.09
HDAC9-202ENST00000405010 TOM1L2Q6ZVM7 507 aa8.22□□□□□ -1.09
HDAC9-202ENST00000405010 RASGRP2Q7LDG7 609 aa8.22□□□□□ -1.09
HDAC9-202ENST00000405010 CCDC84Q86UT8 332 aaPredicted RBP8.22□□□□□ -1.09
HDAC9-202ENST00000405010 CCDC26Q8TAB7 109 aa8.22□□□□□ -1.09
HDAC9-202ENST00000405010 EPSTI1Q96J88 318 aa8.22□□□□□ -1.09
HDAC9-202ENST00000405010 IFT74Q96LB3 600 aa8.22□□□□□ -1.09
HDAC9-202ENST00000405010 UBA5Q9GZZ9 404 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms