RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 CASC1Q6TDU7 716 aa19.61■□□□□ 0.73
CGREF1-205ENST00000404694 RAET1EQ8TD07 263 aa19.61■□□□□ 0.73
CGREF1-205ENST00000404694 GTF3C2Q8WUA4 911 aaPredicted RBP19.61■□□□□ 0.73
CGREF1-205ENST00000404694 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.61■□□□□ 0.73
CGREF1-205ENST00000404694 RPAP3Q9H6T3 665 aaPredicted RBP19.61■□□□□ 0.73
CGREF1-205ENST00000404694 SH2D4AQ9H788 454 aa19.61■□□□□ 0.73
CGREF1-205ENST00000404694 KANSL2Q9H9L4 492 aa19.61■□□□□ 0.73
CGREF1-205ENST00000404694 RBM19Q9Y4C8 960 aaKnown RBP19.61■□□□□ 0.73
CGREF1-205ENST00000404694 RLFQ13129 1914 aa19.6■□□□□ 0.73
CGREF1-205ENST00000404694 FLT3LGP49771 235 aa19.6■□□□□ 0.73
CGREF1-205ENST00000404694 NMIQ13287 307 aaPredicted RBP19.6■□□□□ 0.73
CGREF1-205ENST00000404694 KIAA1755Q5JYT7 1200 aa19.6■□□□□ 0.73
CGREF1-205ENST00000404694 COA7Q96BR5 231 aa19.6■□□□□ 0.73
CGREF1-205ENST00000404694 PAGR1Q9BTK6 254 aa19.6■□□□□ 0.73
CGREF1-205ENST00000404694 RBPJLQ9UBG7 517 aa19.6■□□□□ 0.73
CGREF1-205ENST00000404694 EEF2P13639 858 aaKnown RBP19.59■□□□□ 0.73
CGREF1-205ENST00000404694 GRK4P32298 578 aa19.59■□□□□ 0.73
CGREF1-205ENST00000404694 ERVK-9P63128 1117 aa19.59■□□□□ 0.73
CGREF1-205ENST00000404694 ERVK-24P63145 666 aa19.59■□□□□ 0.73
CGREF1-205ENST00000404694 MLLT1Q03111 559 aaPredicted RBP19.59■□□□□ 0.73
CGREF1-205ENST00000404694 PPARAQ07869 468 aa19.59■□□□□ 0.73
CGREF1-205ENST00000404694 MCMDC2Q4G0Z9 681 aa19.59■□□□□ 0.73
CGREF1-205ENST00000404694 GPRC5AQ8NFJ5 357 aa19.59■□□□□ 0.73
CGREF1-205ENST00000404694 LPAR1Q92633 364 aa19.59■□□□□ 0.73
CGREF1-205ENST00000404694 VCPKMTQ9H867 229 aa19.59■□□□□ 0.73
CGREF1-205ENST00000404694 ZNF287Q9HBT7 754 aa19.59■□□□□ 0.73
CGREF1-205ENST00000404694 PARP14Q460N5 1801 aa19.59■□□□□ 0.73
CGREF1-205ENST00000404694 A0A0G2JMZ2 1700 aa19.59■□□□□ 0.73
CGREF1-205ENST00000404694 KIAA0100Q14667 2235 aaKnown RBP19.59■□□□□ 0.73
CGREF1-205ENST00000404694 PRDM1O75626 825 aa19.58■□□□□ 0.73
CGREF1-205ENST00000404694 ATP2B2Q01814 1243 aa19.58■□□□□ 0.73
CGREF1-205ENST00000404694 LBX2Q6XYB7 198 aa19.58■□□□□ 0.73
CGREF1-205ENST00000404694 ZNF589Q86UQ0 364 aaPredicted RBP19.58■□□□□ 0.73
CGREF1-205ENST00000404694 PLXNB2O15031 1838 aa19.58■□□□□ 0.73
CGREF1-205ENST00000404694 MYH4Q9Y623 1939 aa19.58■□□□□ 0.72
CGREF1-205ENST00000404694 POTEFA5A3E0 1075 aa19.57■□□□□ 0.72
CGREF1-205ENST00000404694 SPDYE16A6NNV3 312 aaPredicted RBP19.57■□□□□ 0.72
CGREF1-205ENST00000404694 IRF5Q13568 498 aa19.57■□□□□ 0.72
CGREF1-205ENST00000404694 ZNF444Q8N0Y2 327 aaPredicted RBP19.57■□□□□ 0.72
CGREF1-205ENST00000404694 SPICE1Q8N0Z3 855 aa19.57■□□□□ 0.72
CGREF1-205ENST00000404694 TANGO6Q9C0B7 1094 aa19.57■□□□□ 0.72
CGREF1-205ENST00000404694 RABGAP1Q9Y3P9 1069 aa19.57■□□□□ 0.72
CGREF1-205ENST00000404694 CCDC171Q6TFL3 1326 aa19.57■□□□□ 0.72
CGREF1-205ENST00000404694 CNMDO75829 334 aa19.57■□□□□ 0.72
CGREF1-205ENST00000404694 SLC3A2P08195 630 aaKnown RBP19.57■□□□□ 0.72
CGREF1-205ENST00000404694 PDE4BQ07343 736 aa19.57■□□□□ 0.72
CGREF1-205ENST00000404694 Q3C1V9 767 aa19.57■□□□□ 0.72
CGREF1-205ENST00000404694 SLAIN1Q8ND83 568 aa19.57■□□□□ 0.72
CGREF1-205ENST00000404694 PORCNQ9H237 461 aa19.57■□□□□ 0.72
CGREF1-205ENST00000404694 PLIN4Q96Q06 1357 aa19.56■□□□□ 0.72
CGREF1-205ENST00000404694 IGKV6D-41A0A0C4DH26 115 aa19.56■□□□□ 0.72
CGREF1-205ENST00000404694 WDR46O15213 610 aaKnown RBP19.56■□□□□ 0.72
CGREF1-205ENST00000404694 ADCY3O60266 1144 aa19.56■□□□□ 0.72
CGREF1-205ENST00000404694 MYCP01106 439 aaPredicted RBP19.56■□□□□ 0.72
CGREF1-205ENST00000404694 ALX1Q15699 326 aa19.56■□□□□ 0.72
CGREF1-205ENST00000404694 TMEM106CQ9BVX2 250 aa19.56■□□□□ 0.72
CGREF1-205ENST00000404694 GOPCQ9HD26 462 aa19.56■□□□□ 0.72
CGREF1-205ENST00000404694 ZMYM6O95789 1325 aa19.55■□□□□ 0.72
CGREF1-205ENST00000404694 HIP1O00291 1037 aa19.55■□□□□ 0.72
CGREF1-205ENST00000404694 HSPD1P10809 573 aaKnown RBP19.55■□□□□ 0.72
CGREF1-205ENST00000404694 MAPK4P31152 587 aa19.55■□□□□ 0.72
CGREF1-205ENST00000404694 CTDSPL2Q05D32 466 aa19.55■□□□□ 0.72
CGREF1-205ENST00000404694 COG2Q14746 738 aa19.55■□□□□ 0.72
CGREF1-205ENST00000404694 PXYLP1Q8TE99 480 aa19.55■□□□□ 0.72
CGREF1-205ENST00000404694 BTBD7Q9P203 1132 aa19.55■□□□□ 0.72
CGREF1-205ENST00000404694 NYAP2Q9P242 653 aa19.55■□□□□ 0.72
CGREF1-205ENST00000404694 ANAPC4Q9UJX5 808 aa19.55■□□□□ 0.72
CGREF1-205ENST00000404694 GJD2Q9UKL4 321 aa19.55■□□□□ 0.72
CGREF1-205ENST00000404694 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.55■□□□□ 0.72
CGREF1-205ENST00000404694 ELNP15502 786 aa19.54■□□□□ 0.72
CGREF1-205ENST00000404694 MTFR1Q15390 333 aa19.54■□□□□ 0.72
CGREF1-205ENST00000404694 CEP95Q96GE4 821 aa19.54■□□□□ 0.72
CGREF1-205ENST00000404694 UPF2Q9HAU5 1272 aaKnown RBP19.54■□□□□ 0.72
CGREF1-205ENST00000404694 DIAPH3Q9NSV4 1193 aa19.54■□□□□ 0.72
CGREF1-205ENST00000404694 HOXC10Q9NYD6 342 aa19.54■□□□□ 0.72
CGREF1-205ENST00000404694 FLOT1O75955 427 aa19.53■□□□□ 0.72
CGREF1-205ENST00000404694 FGAP02671 866 aa19.53■□□□□ 0.72
CGREF1-205ENST00000404694 TSPY3P0CV98 308 aa19.53■□□□□ 0.72
CGREF1-205ENST00000404694 TSPY8P0CW00 308 aa19.53■□□□□ 0.72
CGREF1-205ENST00000404694 MFAP1P55081 439 aaKnown RBP19.53■□□□□ 0.72
CGREF1-205ENST00000404694 CCNA1P78396 465 aa19.53■□□□□ 0.72
CGREF1-205ENST00000404694 FAM47AQ5JRC9 791 aa19.53■□□□□ 0.72
CGREF1-205ENST00000404694 CWC27Q6UX04 472 aaKnown RBP19.53■□□□□ 0.72
CGREF1-205ENST00000404694 GPR142Q7Z601 462 aa19.53■□□□□ 0.72
CGREF1-205ENST00000404694 CCAR1Q8IX12 1150 aaKnown RBP19.53■□□□□ 0.72
CGREF1-205ENST00000404694 NEDD1Q8NHV4 660 aa19.53■□□□□ 0.72
CGREF1-205ENST00000404694 MTMR4Q9NYA4 1195 aa19.53■□□□□ 0.72
CGREF1-205ENST00000404694 BIN2Q9UBW5 565 aaPredicted RBP19.53■□□□□ 0.72
CGREF1-205ENST00000404694 COL11A1P12107 1806 aaPredicted RBP19.53■□□□□ 0.72
CGREF1-205ENST00000404694 RAD21O60216 631 aa19.52■□□□□ 0.72
CGREF1-205ENST00000404694 DSG3P32926 999 aa19.52■□□□□ 0.72
CGREF1-205ENST00000404694 UBXN2AP68543 259 aa19.52■□□□□ 0.72
CGREF1-205ENST00000404694 TFAP4Q01664 338 aa19.52■□□□□ 0.72
CGREF1-205ENST00000404694 SOCS4Q8WXH5 440 aa19.52■□□□□ 0.72
CGREF1-205ENST00000404694 INCENPQ9NQS7 918 aa19.52■□□□□ 0.72
CGREF1-205ENST00000404694 CLIP2Q9UDT6 1046 aa19.52■□□□□ 0.72
CGREF1-205ENST00000404694 TACC3Q9Y6A5 838 aa19.52■□□□□ 0.72
CGREF1-205ENST00000404694 LAMA4Q16363 1823 aa19.52■□□□□ 0.72
CGREF1-205ENST00000404694 INHAP05111 366 aa19.51■□□□□ 0.71
CGREF1-205ENST00000404694 EN2P19622 333 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms