RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 R3HDM1Q15032 1099 aaKnown RBP22.57■■□□□ 1.2
CCDC47-202ENST00000403162 TRMT44Q8IYL2 757 aaKnown RBP22.57■■□□□ 1.2
CCDC47-202ENST00000403162 CRACR2BQ8N4Y2 399 aaPredicted RBP22.57■■□□□ 1.2
CCDC47-202ENST00000403162 SPATA5Q8NB90 893 aa22.57■■□□□ 1.2
CCDC47-202ENST00000403162 PANX2Q96RD6 677 aa22.57■■□□□ 1.2
CCDC47-202ENST00000403162 PCDHB6Q9Y5E3 794 aa22.57■■□□□ 1.2
CCDC47-202ENST00000403162 MROH5Q6ZUA9 1318 aa22.56■■□□□ 1.2
CCDC47-202ENST00000403162 CCDC196A0A1B0GTZ2 297 aa22.56■■□□□ 1.2
CCDC47-202ENST00000403162 GSG1L2A8MUP6 293 aa22.56■■□□□ 1.2
CCDC47-202ENST00000403162 CC2D1AQ6P1N0 951 aaPredicted RBP22.56■■□□□ 1.2
CCDC47-202ENST00000403162 RPGRQ92834 1020 aaKnown RBP22.56■■□□□ 1.2
CCDC47-202ENST00000403162 CELF1Q92879 486 aaKnown RBP22.56■■□□□ 1.2
CCDC47-202ENST00000403162 NRXN2Q9P2S2 1712 aa22.56■■□□□ 1.2
CCDC47-202ENST00000403162 TBC1D8O95759 1140 aa22.56■■□□□ 1.2
CCDC47-202ENST00000403162 WTAPQ15007 396 aa22.56■■□□□ 1.2
CCDC47-202ENST00000403162 TMTC2Q8N394 836 aa22.56■■□□□ 1.2
CCDC47-202ENST00000403162 MAGEB6Q8N7X4 407 aa22.56■■□□□ 1.2
CCDC47-202ENST00000403162 RABGGTAQ92696 567 aa22.56■■□□□ 1.2
CCDC47-202ENST00000403162 BRIP1Q9BX63 1249 aa22.56■■□□□ 1.2
CCDC47-202ENST00000403162 SAMSN1Q9NSI8 373 aaKnown RBP22.56■■□□□ 1.2
CCDC47-202ENST00000403162 COL4A1P02462 1669 aa22.56■■□□□ 1.2
CCDC47-202ENST00000403162 SEC31AO94979 1220 aaKnown RBP22.55■■□□□ 1.2
CCDC47-202ENST00000403162 ARMT1Q9H993 441 aa22.55■■□□□ 1.2
CCDC47-202ENST00000403162 TAF1P21675 1872 aa22.55■■□□□ 1.2
CCDC47-202ENST00000403162 GNAT2P19087 354 aa22.55■■□□□ 1.2
CCDC47-202ENST00000403162 NR5A1Q13285 461 aa22.55■■□□□ 1.2
CCDC47-202ENST00000403162 CRY2Q49AN0 593 aa22.55■■□□□ 1.2
CCDC47-202ENST00000403162 TEX35Q5T0J7 233 aa22.55■■□□□ 1.2
CCDC47-202ENST00000403162 GRAMD1CQ8IYS0 662 aa22.55■■□□□ 1.2
CCDC47-202ENST00000403162 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.55■■□□□ 1.2
CCDC47-202ENST00000403162 CALCOCO1Q9P1Z2 691 aa22.55■■□□□ 1.2
CCDC47-202ENST00000403162 AKR1B15C9JRZ8 316 aaPredicted RBP22.54■■□□□ 1.2
CCDC47-202ENST00000403162 RPS8P62241 208 aaKnown RBP22.54■■□□□ 1.2
CCDC47-202ENST00000403162 NAA15Q9BXJ9 866 aaKnown RBP22.54■■□□□ 1.2
CCDC47-202ENST00000403162 MYH6P13533 1939 aa22.54■■□□□ 1.2
CCDC47-202ENST00000403162 CCDC175P0C221 793 aa22.53■■□□□ 1.2
CCDC47-202ENST00000403162 APTXQ7Z2E3 356 aaKnown RBP22.53■■□□□ 1.2
CCDC47-202ENST00000403162 GOLGA1Q92805 767 aa22.53■■□□□ 1.2
CCDC47-202ENST00000403162 CCDC34Q96HJ3 373 aa22.53■■□□□ 1.2
CCDC47-202ENST00000403162 NACAP1Q9BZK3 213 aa22.53■■□□□ 1.2
CCDC47-202ENST00000403162 CSRNP2Q9H175 543 aa22.53■■□□□ 1.2
CCDC47-202ENST00000403162 AATFQ9NY61 560 aaKnown RBP eCLIP22.53■■□□□ 1.2
CCDC47-202ENST00000403162 ERICH2A1L162 156 aa22.53■■□□□ 1.2
CCDC47-202ENST00000403162 ERICH4A6NGS2 130 aa22.53■■□□□ 1.2
CCDC47-202ENST00000403162 SASH3O75995 380 aa22.53■■□□□ 1.2
CCDC47-202ENST00000403162 ZBTB7AO95365 584 aa22.53■■□□□ 1.2
CCDC47-202ENST00000403162 SLC5A1P13866 664 aa22.53■■□□□ 1.2
CCDC47-202ENST00000403162 RASGRF1Q13972 1273 aa22.53■■□□□ 1.2
CCDC47-202ENST00000403162 JAKMIP3Q5VZ66 844 aa22.53■■□□□ 1.2
CCDC47-202ENST00000403162 HELBQ8NG08 1087 aaPredicted RBP22.53■■□□□ 1.2
CCDC47-202ENST00000403162 DHX58Q96C10 678 aa22.53■■□□□ 1.2
CCDC47-202ENST00000403162 SPATA1Q5VX52 437 aa22.52■■□□□ 1.2
CCDC47-202ENST00000403162 DESI2Q9BSY9 194 aa22.52■■□□□ 1.2
CCDC47-202ENST00000403162 ARFGAP3Q9NP61 516 aa22.52■■□□□ 1.2
CCDC47-202ENST00000403162 BSDC1Q9NW68 430 aaPredicted RBP22.52■■□□□ 1.2
CCDC47-202ENST00000403162 FANCBQ8NB91 859 aa22.52■■□□□ 1.2
CCDC47-202ENST00000403162 OXER1Q8TDS5 423 aa22.52■■□□□ 1.2
CCDC47-202ENST00000403162 RBM17Q96I25 401 aaKnown RBP22.52■■□□□ 1.2
CCDC47-202ENST00000403162 EPC1Q9H2F5 836 aa22.52■■□□□ 1.2
CCDC47-202ENST00000403162 MRPL44Q9H9J2 332 aaKnown RBP22.52■■□□□ 1.2
CCDC47-202ENST00000403162 KLRG2A4D1S0 409 aaPredicted RBP22.51■■□□□ 1.19
CCDC47-202ENST00000403162 PDE6BP35913 854 aa22.51■■□□□ 1.19
CCDC47-202ENST00000403162 PBX1P40424 430 aa22.51■■□□□ 1.19
CCDC47-202ENST00000403162 TDO2P48775 406 aa22.51■■□□□ 1.19
CCDC47-202ENST00000403162 GRAPQ13588 217 aa22.51■■□□□ 1.19
CCDC47-202ENST00000403162 RRP12Q5JTH9 1297 aaKnown RBP22.51■■□□□ 1.19
CCDC47-202ENST00000403162 USP49Q70CQ1 688 aa22.51■■□□□ 1.19
CCDC47-202ENST00000403162 ZNF654Q8IZM8 581 aa22.51■■□□□ 1.19
CCDC47-202ENST00000403162 GRAPLQ8TC17 118 aaPredicted RBP22.51■■□□□ 1.19
CCDC47-202ENST00000403162 CCDC12Q8WUD4 166 aaPredicted RBP22.51■■□□□ 1.19
CCDC47-202ENST00000403162 ZKSCAN3Q9BRR0 538 aa22.51■■□□□ 1.19
CCDC47-202ENST00000403162 PARD6BQ9BYG5 372 aa22.51■■□□□ 1.19
CCDC47-202ENST00000403162 RNF41Q9H4P4 317 aaPredicted RBP22.51■■□□□ 1.19
CCDC47-202ENST00000403162 ANKRD31Q8N7Z5 1873 aa22.51■■□□□ 1.19
CCDC47-202ENST00000403162 CUL4BQ13620 913 aa22.5■■□□□ 1.19
CCDC47-202ENST00000403162 KARSQ15046 597 aaKnown RBP22.5■■□□□ 1.19
CCDC47-202ENST00000403162 SH3RF1Q7Z6J0 888 aa22.5■■□□□ 1.19
CCDC47-202ENST00000403162 RNF26Q9BY78 433 aaPredicted RBP22.5■■□□□ 1.19
CCDC47-202ENST00000403162 CABP5Q9NP86 173 aa22.5■■□□□ 1.19
CCDC47-202ENST00000403162 SEMA3EO15041 775 aa22.5■■□□□ 1.19
CCDC47-202ENST00000403162 PRKAB2O43741 272 aa22.5■■□□□ 1.19
CCDC47-202ENST00000403162 TXLNAP40222 546 aa22.5■■□□□ 1.19
CCDC47-202ENST00000403162 CHRNDQ07001 517 aa22.5■■□□□ 1.19
CCDC47-202ENST00000403162 MTF1Q14872 753 aa22.5■■□□□ 1.19
CCDC47-202ENST00000403162 PPP2R5BQ15173 497 aa22.5■■□□□ 1.19
CCDC47-202ENST00000403162 LCORLQ8N3X6 602 aa22.5■■□□□ 1.19
CCDC47-202ENST00000403162 ADGRG1Q9Y653 693 aa22.5■■□□□ 1.19
CCDC47-202ENST00000403162 SLC4A4Q9Y6R1 1079 aa22.5■■□□□ 1.19
CCDC47-202ENST00000403162 SOWAHDA6NJG2 315 aa22.49■■□□□ 1.19
CCDC47-202ENST00000403162 CDKAL1Q5VV42 579 aa22.49■■□□□ 1.19
CCDC47-202ENST00000403162 CTAGE1Q96RT6 745 aa22.49■■□□□ 1.19
CCDC47-202ENST00000403162 TOMM22Q9NS69 142 aa22.49■■□□□ 1.19
CCDC47-202ENST00000403162 ATF5Q9Y2D1 282 aaPredicted RBP22.49■■□□□ 1.19
CCDC47-202ENST00000403162 SYNRGQ9UMZ2 1314 aa22.49■■□□□ 1.19
CCDC47-202ENST00000403162 TRIM75PA6NK02 468 aa22.49■■□□□ 1.19
CCDC47-202ENST00000403162 TEX33O43247 280 aa22.49■■□□□ 1.19
CCDC47-202ENST00000403162 PPFIBP1Q86W92 1011 aa22.49■■□□□ 1.19
CCDC47-202ENST00000403162 CCDC82Q8N4S0 544 aa22.49■■□□□ 1.19
CCDC47-202ENST00000403162 ADD3Q9UEY8 706 aaKnown RBP22.49■■□□□ 1.19
CCDC47-202ENST00000403162 CCDC151A5D8V7 595 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms