RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 A0A1W2PQD8 194 aa16.32■□□□□ 0.2
RPRD1A-202ENST00000399022 CALM1P0DP23 149 aa16.32■□□□□ 0.2
RPRD1A-202ENST00000399022 CALM2P0DP24 149 aa16.32■□□□□ 0.2
RPRD1A-202ENST00000399022 CALM3P0DP25 149 aa16.32■□□□□ 0.2
RPRD1A-202ENST00000399022 CCZ1BP86790 482 aa16.32■□□□□ 0.2
RPRD1A-202ENST00000399022 CCZ1P86791 482 aaPredicted RBP16.32■□□□□ 0.2
RPRD1A-202ENST00000399022 SERTAD1Q9UHV2 236 aa16.32■□□□□ 0.2
RPRD1A-202ENST00000399022 DENND2AQ9ULE3 1009 aa16.32■□□□□ 0.2
RPRD1A-202ENST00000399022 BUB1BO60566 1050 aaPredicted RBP16.32■□□□□ 0.2
RPRD1A-202ENST00000399022 ARID5AQ03989 594 aa16.32■□□□□ 0.2
RPRD1A-202ENST00000399022 CCDC40Q4G0X9 1142 aa16.32■□□□□ 0.2
RPRD1A-202ENST00000399022 FAM47AQ5JRC9 791 aa16.32■□□□□ 0.2
RPRD1A-202ENST00000399022 PIGBQ92521 554 aa16.32■□□□□ 0.2
RPRD1A-202ENST00000399022 OSBPL5Q9H0X9 879 aaPredicted RBP16.32■□□□□ 0.2
RPRD1A-202ENST00000399022 GPR108Q9NPR9 543 aa16.32■□□□□ 0.2
RPRD1A-202ENST00000399022 ENC1O14682 589 aa16.32■□□□□ 0.2
RPRD1A-202ENST00000399022 FGFR1OPO95684 399 aaKnown RBP16.32■□□□□ 0.2
RPRD1A-202ENST00000399022 PPP2R5AQ15172 486 aa16.32■□□□□ 0.2
RPRD1A-202ENST00000399022 VEZTQ9HBM0 779 aa16.32■□□□□ 0.2
RPRD1A-202ENST00000399022 AK9Q5TCS8 1911 aa16.32■□□□□ 0.2
RPRD1A-202ENST00000399022 TADA3O75528 432 aa16.31■□□□□ 0.2
RPRD1A-202ENST00000399022 GCKP35557 465 aa16.31■□□□□ 0.2
RPRD1A-202ENST00000399022 SLF2Q8IX21 1173 aa16.31■□□□□ 0.2
RPRD1A-202ENST00000399022 PREX1Q8TCU6 1659 aa16.31■□□□□ 0.2
RPRD1A-202ENST00000399022 IKBKBO14920 756 aa16.31■□□□□ 0.2
RPRD1A-202ENST00000399022 MYOM1P52179 1685 aa16.31■□□□□ 0.2
RPRD1A-202ENST00000399022 ASIC1P78348 528 aa16.31■□□□□ 0.2
RPRD1A-202ENST00000399022 TBC1D8BQ0IIM8 1120 aa16.31■□□□□ 0.2
RPRD1A-202ENST00000399022 KCTD16Q68DU8 428 aa16.31■□□□□ 0.2
RPRD1A-202ENST00000399022 ZNF654Q8IZM8 581 aa16.31■□□□□ 0.2
RPRD1A-202ENST00000399022 PTPRUQ92729 1446 aa16.31■□□□□ 0.2
RPRD1A-202ENST00000399022 TSG101Q99816 390 aa16.31■□□□□ 0.2
RPRD1A-202ENST00000399022 PYM1Q9BRP8 204 aaKnown RBP16.31■□□□□ 0.2
RPRD1A-202ENST00000399022 RPAP1Q9BWH6 1393 aaPredicted RBP16.31■□□□□ 0.2
RPRD1A-202ENST00000399022 RTEL1Q9NZ71 1219 aa16.31■□□□□ 0.2
RPRD1A-202ENST00000399022 ANKRD62A6NC57 917 aa16.31■□□□□ 0.2
RPRD1A-202ENST00000399022 USP17L12C9JPN9 530 aa16.31■□□□□ 0.2
RPRD1A-202ENST00000399022 USP17L21D6R901 530 aa16.31■□□□□ 0.2
RPRD1A-202ENST00000399022 UBAP1LF5GYI3 381 aa16.31■□□□□ 0.2
RPRD1A-202ENST00000399022 CIAO1O76071 339 aa16.31■□□□□ 0.2
RPRD1A-202ENST00000399022 HLFQ16534 295 aa16.31■□□□□ 0.2
RPRD1A-202ENST00000399022 VPS36Q86VN1 386 aa16.31■□□□□ 0.2
RPRD1A-202ENST00000399022 FMNL3Q8IVF7 1028 aa16.31■□□□□ 0.2
RPRD1A-202ENST00000399022 IQUBQ8NA54 791 aa16.31■□□□□ 0.2
RPRD1A-202ENST00000399022 NYXQ9GZU5 481 aa16.31■□□□□ 0.2
RPRD1A-202ENST00000399022 TAF6LQ9Y6J9 622 aa16.31■□□□□ 0.2
RPRD1A-202ENST00000399022 CARMIL3Q8ND23 1372 aa16.3■□□□□ 0.2
RPRD1A-202ENST00000399022 RIMBP2O15034 1052 aa16.3■□□□□ 0.2
RPRD1A-202ENST00000399022 PEX19P40855 299 aa16.3■□□□□ 0.2
RPRD1A-202ENST00000399022 GNAQP50148 359 aa16.3■□□□□ 0.2
RPRD1A-202ENST00000399022 NLRP10Q86W26 655 aa16.3■□□□□ 0.2
RPRD1A-202ENST00000399022 MICAL1Q8TDZ2 1067 aa16.3■□□□□ 0.2
RPRD1A-202ENST00000399022 UBLCP1Q8WVY7 318 aaPredicted RBP16.3■□□□□ 0.2
RPRD1A-202ENST00000399022 NCAPGQ9BPX3 1015 aa16.3■□□□□ 0.2
RPRD1A-202ENST00000399022 EXOC1Q9NV70 894 aa16.3■□□□□ 0.2
RPRD1A-202ENST00000399022 NBPF26B4DH59 902 aa16.3■□□□□ 0.2
RPRD1A-202ENST00000399022 CALML3P27482 149 aa16.3■□□□□ 0.2
RPRD1A-202ENST00000399022 GSTO1P78417 241 aa16.3■□□□□ 0.2
RPRD1A-202ENST00000399022 NBPF14Q5TI25 921 aa16.3■□□□□ 0.2
RPRD1A-202ENST00000399022 ARMCX5Q6P1M9 558 aa16.3■□□□□ 0.2
RPRD1A-202ENST00000399022 NBPF10Q6P3W6 841 aaKnown RBP16.3■□□□□ 0.2
RPRD1A-202ENST00000399022 VSTM4Q8IW00 320 aa16.3■□□□□ 0.2
RPRD1A-202ENST00000399022 NBPF15Q8N660 670 aa16.3■□□□□ 0.2
RPRD1A-202ENST00000399022 CPSF2Q9P2I0 782 aaKnown RBP16.3■□□□□ 0.2
RPRD1A-202ENST00000399022 UBE4AQ14139 1066 aa16.3■□□□□ 0.2
RPRD1A-202ENST00000399022 ARHGEF28Q8N1W1 1705 aaKnown RBP16.29■□□□□ 0.2
RPRD1A-202ENST00000399022 SOWAHDA6NJG2 315 aa16.29■□□□□ 0.2
RPRD1A-202ENST00000399022 PRKAB2O43741 272 aa16.29■□□□□ 0.2
RPRD1A-202ENST00000399022 TRIM14Q14142 442 aa16.29■□□□□ 0.2
RPRD1A-202ENST00000399022 SMARCC2Q8TAQ2 1214 aa16.29■□□□□ 0.2
RPRD1A-202ENST00000399022 PLA2G4AP47712 749 aa16.29■□□□□ 0.2
RPRD1A-202ENST00000399022 PPARAQ07869 468 aa16.29■□□□□ 0.2
RPRD1A-202ENST00000399022 APOA5Q6Q788 366 aa16.29■□□□□ 0.2
RPRD1A-202ENST00000399022 SECISBP2LQ93073 1101 aaKnown RBP16.29■□□□□ 0.2
RPRD1A-202ENST00000399022 ZNF622Q969S3 477 aaKnown RBP eCLIP16.29■□□□□ 0.24e-10■□□□□ 8.9
RPRD1A-202ENST00000399022 GSTTP1A0A1W2PQM5 241 aa16.29■□□□□ 0.2
RPRD1A-202ENST00000399022 AMPD3Q01432 767 aa16.29■□□□□ 0.2
RPRD1A-202ENST00000399022 IQCB1Q15051 598 aa16.29■□□□□ 0.2
RPRD1A-202ENST00000399022 E2F5Q15329 346 aa16.29■□□□□ 0.2
RPRD1A-202ENST00000399022 LINC00301Q8NCQ3 95 aa16.29■□□□□ 0.2
RPRD1A-202ENST00000399022 NSRP1Q9H0G5 558 aaKnown RBP16.29■□□□□ 0.2
RPRD1A-202ENST00000399022 ODF2LQ9ULJ1 636 aa16.29■□□□□ 0.2
RPRD1A-202ENST00000399022 ADGRL3Q9HAR2 1447 aa16.29■□□□□ 0.2
RPRD1A-202ENST00000399022 KIF4AO95239 1232 aa16.29■□□□□ 0.2
RPRD1A-202ENST00000399022 DTHD1Q6ZMT9 781 aa16.29■□□□□ 0.2
RPRD1A-202ENST00000399022 RPGRIP1Q96KN7 1286 aa16.29■□□□□ 0.2
RPRD1A-202ENST00000399022 CASP14P31944 242 aa16.28■□□□□ 0.2
RPRD1A-202ENST00000399022 CCDC50Q8IVM0 306 aa16.28■□□□□ 0.2
RPRD1A-202ENST00000399022 SAMD15Q9P1V8 674 aa16.28■□□□□ 0.2
RPRD1A-202ENST00000399022 TMEM131LA2VDJ0 1609 aa16.28■□□□□ 0.2
RPRD1A-202ENST00000399022 RPSAP08865 295 aaKnown RBP16.28■□□□□ 0.2
RPRD1A-202ENST00000399022 LETM2Q2VYF4 491 aa16.28■□□□□ 0.2
RPRD1A-202ENST00000399022 BRINP3Q76B58 766 aa16.28■□□□□ 0.2
RPRD1A-202ENST00000399022 IFT20Q8IY31 132 aa16.28■□□□□ 0.2
RPRD1A-202ENST00000399022 GOLPH3LQ9H4A5 285 aa16.28■□□□□ 0.2
RPRD1A-202ENST00000399022 CEP170BQ9Y4F5 1589 aaPredicted RBP16.28■□□□□ 0.2
RPRD1A-202ENST00000399022 EIF6P56537 245 aaKnown RBP16.28■□□□□ 0.2
RPRD1A-202ENST00000399022 CHRNDQ07001 517 aa16.28■□□□□ 0.2
RPRD1A-202ENST00000399022 IFT88Q13099 833 aa16.28■□□□□ 0.2
RPRD1A-202ENST00000399022 TCERG1LQ5VWI1 586 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms