RNA–Protein interactions for RNA: ENST00000397105.7

SEC13-207, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 883 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-207ENST00000397105 NT5C2P49902 561 aa24.74■■□□□ 1.55
SEC13-207ENST00000397105 VCPKMTQ9H867 229 aa24.74■■□□□ 1.55
SEC13-207ENST00000397105 ARHGEF6Q15052 776 aa24.73■■□□□ 1.55
SEC13-207ENST00000397105 CATSPERGQ6ZRH7 1159 aa24.73■■□□□ 1.55
SEC13-207ENST00000397105 MAP4K1Q92918 833 aa24.73■■□□□ 1.55
SEC13-207ENST00000397105 MKL1Q969V6 931 aa24.73■■□□□ 1.55
SEC13-207ENST00000397105 P2RX7Q99572 595 aaKnown RBP24.73■■□□□ 1.55
SEC13-207ENST00000397105 RPAP3Q9H6T3 665 aaPredicted RBP24.73■■□□□ 1.55
SEC13-207ENST00000397105 PTPRFP10586 1907 aa24.73■■□□□ 1.55
SEC13-207ENST00000397105 BCRP11274 1271 aa24.72■■□□□ 1.55
SEC13-207ENST00000397105 KIF22Q14807 665 aa24.72■■□□□ 1.55
SEC13-207ENST00000397105 CTU1Q7Z7A3 348 aaKnown RBP24.72■■□□□ 1.55
SEC13-207ENST00000397105 SPICE1Q8N0Z3 855 aa24.72■■□□□ 1.55
SEC13-207ENST00000397105 ESR2Q92731 530 aa24.72■■□□□ 1.55
SEC13-207ENST00000397105 SYNPO2Q9UMS6 1093 aa24.72■■□□□ 1.55
SEC13-207ENST00000397105 MYH8P13535 1937 aa24.72■■□□□ 1.55
SEC13-207ENST00000397105 RAD21O60216 631 aa24.71■■□□□ 1.55
SEC13-207ENST00000397105 HERVK_113P62684 666 aa24.71■■□□□ 1.55
SEC13-207ENST00000397105 KIAA1755Q5JYT7 1200 aa24.71■■□□□ 1.55
SEC13-207ENST00000397105 CD99L2Q8TCZ2 262 aa24.71■■□□□ 1.55
SEC13-207ENST00000397105 LOC285556D6RIA3 1793 aa24.71■■□□□ 1.55
SEC13-207ENST00000397105 WDR46O15213 610 aaKnown RBP24.7■■□□□ 1.54
SEC13-207ENST00000397105 LACTBP83111 547 aaPredicted RBP24.7■■□□□ 1.54
SEC13-207ENST00000397105 ANKRD13CQ8N6S4 541 aa24.7■■□□□ 1.54
SEC13-207ENST00000397105 GTF3C2Q8WUA4 911 aaPredicted RBP24.7■■□□□ 1.54
SEC13-207ENST00000397105 TANGO6Q9C0B7 1094 aa24.7■■□□□ 1.54
SEC13-207ENST00000397105 LSG1Q9H089 658 aaKnown RBP24.7■■□□□ 1.54
SEC13-207ENST00000397105 CNNM2Q9H8M5 875 aa24.7■■□□□ 1.54
SEC13-207ENST00000397105 ANO2Q9NQ90 1003 aa24.7■■□□□ 1.54
SEC13-207ENST00000397105 IL17RBQ9NRM6 502 aa24.7■■□□□ 1.54
SEC13-207ENST00000397105 TCP11L1Q9NUJ3 509 aa24.7■■□□□ 1.54
SEC13-207ENST00000397105 STX8Q9UNK0 236 aa24.7■■□□□ 1.54
SEC13-207ENST00000397105 CASP8AP2Q9UKL3 1982 aa24.7■■□□□ 1.54
SEC13-207ENST00000397105 F5H6K3 240 aa24.69■■□□□ 1.54
SEC13-207ENST00000397105 NMT2O60551 498 aa24.69■■□□□ 1.54
SEC13-207ENST00000397105 KLRC3Q07444 240 aa24.69■■□□□ 1.54
SEC13-207ENST00000397105 KRT23Q9C075 422 aa24.69■■□□□ 1.54
SEC13-207ENST00000397105 HOXC10Q9NYD6 342 aa24.69■■□□□ 1.54
SEC13-207ENST00000397105 NEDD4P46934 1319 aa24.68■■□□□ 1.54
SEC13-207ENST00000397105 CYP21A2P08686 494 aa24.68■■□□□ 1.54
SEC13-207ENST00000397105 COG2Q14746 738 aa24.68■■□□□ 1.54
SEC13-207ENST00000397105 PKN2Q16513 984 aaKnown RBP24.68■■□□□ 1.54
SEC13-207ENST00000397105 FAM110CQ1W6H9 321 aa24.68■■□□□ 1.54
SEC13-207ENST00000397105 TNS4Q8IZW8 715 aa24.68■■□□□ 1.54
SEC13-207ENST00000397105 EFCC1Q9HA90 598 aa24.68■■□□□ 1.54
SEC13-207ENST00000397105 RBM8AQ9Y5S9 174 aaKnown RBP24.68■■□□□ 1.54
SEC13-207ENST00000397105 NOVP48745 357 aa24.67■■□□□ 1.54
SEC13-207ENST00000397105 LRRC47Q8N1G4 583 aaKnown RBP24.67■■□□□ 1.54
SEC13-207ENST00000397105 GMCL1P1Q8NEA9 526 aa24.67■■□□□ 1.54
SEC13-207ENST00000397105 TRIM17Q9Y577 477 aa24.67■■□□□ 1.54
SEC13-207ENST00000397105 KDM4AO75164 1064 aa24.66■■□□□ 1.54
SEC13-207ENST00000397105 NDUFB10O96000 172 aa24.66■■□□□ 1.54
SEC13-207ENST00000397105 GNRH1P01148 92 aa24.66■■□□□ 1.54
SEC13-207ENST00000397105 PSMC4P43686 418 aa24.66■■□□□ 1.54
SEC13-207ENST00000397105 TRDNQ13061 729 aa24.66■■□□□ 1.54
SEC13-207ENST00000397105 GPRC5AQ8NFJ5 357 aa24.66■■□□□ 1.54
SEC13-207ENST00000397105 TTC14Q96N46 770 aa24.66■■□□□ 1.54
SEC13-207ENST00000397105 GREB1LQ9C091 1923 aaPredicted RBP24.65■■□□□ 1.54
SEC13-207ENST00000397105 B4E1Z4 1266 aa24.65■■□□□ 1.54
SEC13-207ENST00000397105 FLOT1O75955 427 aa24.65■■□□□ 1.54
SEC13-207ENST00000397105 CCDC178Q5BJE1 867 aa24.65■■□□□ 1.54
SEC13-207ENST00000397105 OTOP1Q7RTM1 612 aa24.65■■□□□ 1.54
SEC13-207ENST00000397105 IQCA1Q86XH1 822 aa24.65■■□□□ 1.54
SEC13-207ENST00000397105 RBPJLQ9UBG7 517 aa24.65■■□□□ 1.54
SEC13-207ENST00000397105 MORF4L1Q9UBU8 362 aa24.65■■□□□ 1.54
SEC13-207ENST00000397105 FMNL1O95466 1100 aaPredicted RBP24.64■■□□□ 1.54
SEC13-207ENST00000397105 FCGRTP55899 365 aa24.64■■□□□ 1.54
SEC13-207ENST00000397105 FAM83BQ5T0W9 1011 aa24.64■■□□□ 1.54
SEC13-207ENST00000397105 SLFN13Q68D06 897 aa24.64■■□□□ 1.54
SEC13-207ENST00000397105 LBX2Q6XYB7 198 aa24.64■■□□□ 1.54
SEC13-207ENST00000397105 ARHGAP39Q9C0H5 1083 aa24.64■■□□□ 1.54
SEC13-207ENST00000397105 MCOLN1Q9GZU1 580 aa24.64■■□□□ 1.54
SEC13-207ENST00000397105 ZSWIM5Q9P217 1185 aa24.64■■□□□ 1.54
SEC13-207ENST00000397105 RABGAP1Q9Y3P9 1069 aa24.64■■□□□ 1.54
SEC13-207ENST00000397105 SPDYE16A6NNV3 312 aaPredicted RBP24.63■■□□□ 1.53
SEC13-207ENST00000397105 ECM2O94769 699 aaPredicted RBP24.63■■□□□ 1.53
SEC13-207ENST00000397105 TOP1P11387 765 aaKnown RBP24.63■■□□□ 1.53
SEC13-207ENST00000397105 HOXD10P28358 340 aa24.63■■□□□ 1.53
SEC13-207ENST00000397105 CAP1Q01518 475 aa24.63■■□□□ 1.53
SEC13-207ENST00000397105 NKX2-3Q8TAU0 364 aa24.63■■□□□ 1.53
SEC13-207ENST00000397105 PAGR1Q9BTK6 254 aa24.63■■□□□ 1.53
SEC13-207ENST00000397105 TXNRD2Q9NNW7 524 aa24.63■■□□□ 1.53
SEC13-207ENST00000397105 MYPNQ86TC9 1320 aa24.62■■□□□ 1.53
SEC13-207ENST00000397105 E7EWF7 191 aa24.62■■□□□ 1.53
SEC13-207ENST00000397105 DSG3P32926 999 aa24.62■■□□□ 1.53
SEC13-207ENST00000397105 NECTIN1Q15223 517 aa24.62■■□□□ 1.53
SEC13-207ENST00000397105 POTEEQ6S8J3 1075 aa24.62■■□□□ 1.53
SEC13-207ENST00000397105 DGKHQ86XP1 1220 aa24.62■■□□□ 1.53
SEC13-207ENST00000397105 GMCL1Q96IK5 515 aa24.62■■□□□ 1.53
SEC13-207ENST00000397105 TRIM47Q96LD4 638 aa24.62■■□□□ 1.53
SEC13-207ENST00000397105 NUP88Q99567 741 aaPredicted RBP24.62■■□□□ 1.53
SEC13-207ENST00000397105 TMEM47Q9BQJ4 181 aa24.62■■□□□ 1.53
SEC13-207ENST00000397105 CTGFP29279 349 aa24.61■■□□□ 1.53
SEC13-207ENST00000397105 ERVK-9P63128 1117 aa24.61■■□□□ 1.53
SEC13-207ENST00000397105 ERVK-24P63145 666 aa24.61■■□□□ 1.53
SEC13-207ENST00000397105 RALYLQ86SE5 291 aaKnown RBP24.61■■□□□ 1.53
SEC13-207ENST00000397105 MB21D1Q8N884 522 aa24.61■■□□□ 1.53
SEC13-207ENST00000397105 NCOA7Q8NI08 942 aa24.61■■□□□ 1.53
SEC13-207ENST00000397105 ZSCAN10Q96SZ4 725 aaPredicted RBP24.61■■□□□ 1.53
SEC13-207ENST00000397105 ZKSCAN3Q9BRR0 538 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms