RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 OLFML2BQ68BL8 750 aa16.5■□□□□ 0.23
SEC13-205ENST00000397101 TMED8Q6PL24 325 aaPredicted RBP16.5■□□□□ 0.23
SEC13-205ENST00000397101 ADGRA1Q86SQ6 560 aa16.5■□□□□ 0.23
SEC13-205ENST00000397101 CHD1LQ86WJ1 897 aa16.5■□□□□ 0.23
SEC13-205ENST00000397101 FAM161BQ96MY7 647 aa16.5■□□□□ 0.23
SEC13-205ENST00000397101 LNPKQ9C0E8 428 aa16.5■□□□□ 0.23
SEC13-205ENST00000397101 IL1RAPL2Q9NP60 686 aa16.5■□□□□ 0.23
SEC13-205ENST00000397101 LTBP2Q14767 1821 aa16.49■□□□□ 0.23
SEC13-205ENST00000397101 STRNO43815 780 aa16.49■□□□□ 0.23
SEC13-205ENST00000397101 VCAM1P19320 739 aa16.49■□□□□ 0.23
SEC13-205ENST00000397101 CNGA1P29973 690 aa16.49■□□□□ 0.23
SEC13-205ENST00000397101 NUCB1Q02818 461 aa16.49■□□□□ 0.23
SEC13-205ENST00000397101 SHHQ15465 462 aa16.49■□□□□ 0.23
SEC13-205ENST00000397101 CCDC158Q5M9N0 1113 aa16.49■□□□□ 0.23
SEC13-205ENST00000397101 SLC39A5Q6ZMH5 540 aa16.49■□□□□ 0.23
SEC13-205ENST00000397101 CLASRPQ8N2M8 674 aaKnown RBP16.49■□□□□ 0.23
SEC13-205ENST00000397101 MAFAQ8NHW3 353 aaPredicted RBP16.49■□□□□ 0.23
SEC13-205ENST00000397101 NPLOC4Q8TAT6 608 aa16.49■□□□□ 0.23
SEC13-205ENST00000397101 SYMPKQ92797 1274 aaKnown RBP16.49■□□□□ 0.23
SEC13-205ENST00000397101 FEZ1Q99689 392 aa16.49■□□□□ 0.23
SEC13-205ENST00000397101 PRDM6Q9NQX0 595 aa16.49■□□□□ 0.23
SEC13-205ENST00000397101 SEPT4O43236 478 aa16.48■□□□□ 0.23
SEC13-205ENST00000397101 CYP2E1P05181 493 aaPredicted RBP16.48■□□□□ 0.23
SEC13-205ENST00000397101 TTC39AQ5SRH9 613 aa16.48■□□□□ 0.23
SEC13-205ENST00000397101 TRPV1Q8NER1 839 aa16.48■□□□□ 0.23
SEC13-205ENST00000397101 BTBD7Q9P203 1132 aa16.48■□□□□ 0.23
SEC13-205ENST00000397101 SERPINB13Q9UIV8 391 aa16.48■□□□□ 0.23
SEC13-205ENST00000397101 SPDYE16A6NNV3 312 aaPredicted RBP16.47■□□□□ 0.23
SEC13-205ENST00000397101 KBTBD13C9JR72 458 aa16.47■□□□□ 0.23
SEC13-205ENST00000397101 IFIT2P09913 472 aaKnown RBP16.47■□□□□ 0.23
SEC13-205ENST00000397101 CYP2C19P33261 490 aa16.47■□□□□ 0.23
SEC13-205ENST00000397101 WDR78Q5VTH9 848 aa16.47■□□□□ 0.23
SEC13-205ENST00000397101 SHCBP1Q8NEM2 672 aa16.47■□□□□ 0.23
SEC13-205ENST00000397101 ATP11BQ9Y2G3 1177 aa16.47■□□□□ 0.23
SEC13-205ENST00000397101 CDK5RAP2Q96SN8 1893 aa16.47■□□□□ 0.23
SEC13-205ENST00000397101 RLFQ13129 1914 aa16.47■□□□□ 0.23
SEC13-205ENST00000397101 TNNI3KQ59H18 835 aa16.46■□□□□ 0.23
SEC13-205ENST00000397101 C9orf50Q5SZB4 431 aa16.46■□□□□ 0.23
SEC13-205ENST00000397101 TTC6Q86TZ1 520 aa16.46■□□□□ 0.23
SEC13-205ENST00000397101 AACSQ86V21 672 aa16.46■□□□□ 0.23
SEC13-205ENST00000397101 TTYH1Q9H313 450 aaPredicted RBP16.46■□□□□ 0.23
SEC13-205ENST00000397101 HOXC10Q9NYD6 342 aa16.46■□□□□ 0.23
SEC13-205ENST00000397101 SAP30BPQ9UHR5 308 aaKnown RBP16.46■□□□□ 0.23
SEC13-205ENST00000397101 FPGT-TNNI3KV9GXZ4 949 aa16.46■□□□□ 0.23
SEC13-205ENST00000397101 ZNF236Q9UL36 1845 aa16.46■□□□□ 0.23
SEC13-205ENST00000397101 ABCB5Q2M3G0 1257 aa16.45■□□□□ 0.22
SEC13-205ENST00000397101 CERKLQ49MI3 558 aaPredicted RBP16.45■□□□□ 0.22
SEC13-205ENST00000397101 GJC2Q5T442 439 aaPredicted RBP16.45■□□□□ 0.22
SEC13-205ENST00000397101 DPP9Q86TI2 863 aa16.45■□□□□ 0.22
SEC13-205ENST00000397101 ABRAQ8N0Z2 381 aa16.45■□□□□ 0.22
SEC13-205ENST00000397101 BADQ92934 168 aa16.45■□□□□ 0.22
SEC13-205ENST00000397101 CABP5Q9NP86 173 aa16.45■□□□□ 0.22
SEC13-205ENST00000397101 PDLIM7Q9NR12 457 aa16.45■□□□□ 0.22
SEC13-205ENST00000397101 SNRKQ9NRH2 765 aa16.45■□□□□ 0.22
SEC13-205ENST00000397101 SLC5A4Q9NY91 659 aa16.45■□□□□ 0.22
SEC13-205ENST00000397101 NDUFB9Q9Y6M9 179 aa16.45■□□□□ 0.22
SEC13-205ENST00000397101 ADORA2AP29274 412 aa16.44■□□□□ 0.22
SEC13-205ENST00000397101 DYNLL1P63167 89 aaKnown RBP16.44■□□□□ 0.22
SEC13-205ENST00000397101 COG2Q14746 738 aa16.44■□□□□ 0.22
SEC13-205ENST00000397101 RAB3GAP1Q15042 981 aa16.44■□□□□ 0.22
SEC13-205ENST00000397101 ZYXQ15942 572 aaKnown RBP16.44■□□□□ 0.22
SEC13-205ENST00000397101 TRIM60Q495X7 471 aa16.44■□□□□ 0.22
SEC13-205ENST00000397101 ACER1Q8TDN7 264 aa16.44■□□□□ 0.22
SEC13-205ENST00000397101 DBNDD2Q9BQY9 259 aa16.44■□□□□ 0.22
SEC13-205ENST00000397101 CCDC8Q9H0W5 538 aaPredicted RBP16.44■□□□□ 0.22
SEC13-205ENST00000397101 RPAP3Q9H6T3 665 aaPredicted RBP16.44■□□□□ 0.22
SEC13-205ENST00000397101 NRBP1Q9UHY1 535 aa16.44■□□□□ 0.22
SEC13-205ENST00000397101 FOSL2P15408 326 aa16.43■□□□□ 0.22
SEC13-205ENST00000397101 CYP7A1P22680 504 aa16.43■□□□□ 0.22
SEC13-205ENST00000397101 ZAP70P43403 619 aa16.43■□□□□ 0.22
SEC13-205ENST00000397101 USP5P45974 858 aa16.43■□□□□ 0.22
SEC13-205ENST00000397101 MB21D1Q8N884 522 aa16.43■□□□□ 0.22
SEC13-205ENST00000397101 MYLIPQ8WY64 445 aa16.43■□□□□ 0.22
SEC13-205ENST00000397101 GPATCH3Q96I76 525 aa16.43■□□□□ 0.22
SEC13-205ENST00000397101 MOV10L1Q9BXT6 1211 aaKnown RBP16.43■□□□□ 0.22
SEC13-205ENST00000397101 SPATC1LQ9H0A9 340 aa16.43■□□□□ 0.22
SEC13-205ENST00000397101 PIH1D3Q9NQM4 214 aaKnown RBP16.43■□□□□ 0.22
SEC13-205ENST00000397101 PRDM5Q9NQX1 630 aaPredicted RBP16.43■□□□□ 0.22
SEC13-205ENST00000397101 TACC3Q9Y6A5 838 aa16.43■□□□□ 0.22
SEC13-205ENST00000397101 TRIM43BA6NCK2 446 aa16.42■□□□□ 0.22
SEC13-205ENST00000397101 GUCY1A2P33402 732 aa16.42■□□□□ 0.22
SEC13-205ENST00000397101 SHMT1P34896 483 aa16.42■□□□□ 0.22
SEC13-205ENST00000397101 LRRC41Q15345 812 aa16.42■□□□□ 0.22
SEC13-205ENST00000397101 SKAP1Q86WV1 359 aa16.42■□□□□ 0.22
SEC13-205ENST00000397101 TRIM43Q96BQ3 446 aaPredicted RBP16.42■□□□□ 0.22
SEC13-205ENST00000397101 MROH8Q9H579 483 aa16.42■□□□□ 0.22
SEC13-205ENST00000397101 ERCC3P19447 782 aa16.41■□□□□ 0.22
SEC13-205ENST00000397101 GABPAQ06546 454 aa16.41■□□□□ 0.22
SEC13-205ENST00000397101 EAF2Q96CJ1 260 aaPredicted RBP16.41■□□□□ 0.22
SEC13-205ENST00000397101 PHF24Q9UPV7 400 aa16.41■□□□□ 0.22
SEC13-205ENST00000397101 MYH1P12882 1939 aa16.41■□□□□ 0.22
SEC13-205ENST00000397101 ROBO3Q96MS0 1386 aa16.4■□□□□ 0.22
SEC13-205ENST00000397101 TTC28Q96AY4 2481 aa16.4■□□□□ 0.22
SEC13-205ENST00000397101 KIAA0355O15063 1070 aa16.4■□□□□ 0.22
SEC13-205ENST00000397101 COBLO75128 1261 aa16.4■□□□□ 0.22
SEC13-205ENST00000397101 PDE4AP27815 886 aa16.4■□□□□ 0.22
SEC13-205ENST00000397101 ADCYAP1R1P41586 468 aa16.4■□□□□ 0.22
SEC13-205ENST00000397101 SH3RF1Q7Z6J0 888 aa16.4■□□□□ 0.22
SEC13-205ENST00000397101 IDH1O75874 414 aaKnown RBP16.39■□□□□ 0.21
SEC13-205ENST00000397101 CLTBP09497 229 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms