RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 ATP6V1DQ9Y5K8 247 aa14.77□□□□□ -0.05
TRIM39-204ENST00000396548 PHF20L1A8MW92 1017 aa14.76□□□□□ -0.05
TRIM39-204ENST00000396548 PDHBP11177 359 aa14.76□□□□□ -0.05
TRIM39-204ENST00000396548 KIF5BP33176 963 aa14.76□□□□□ -0.05
TRIM39-204ENST00000396548 DNM1Q05193 864 aaKnown RBP14.76□□□□□ -0.05
TRIM39-204ENST00000396548 RASA3Q14644 834 aa14.76□□□□□ -0.05
TRIM39-204ENST00000396548 C9orf131Q5VYM1 1079 aa14.76□□□□□ -0.05
TRIM39-204ENST00000396548 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.76□□□□□ -0.05
TRIM39-204ENST00000396548 CNPY2Q9Y2B0 182 aa14.76□□□□□ -0.05
TRIM39-204ENST00000396548 KIF28PB7ZC32 967 aa14.76□□□□□ -0.05
TRIM39-204ENST00000396548 SMARCA1P28370 1054 aa14.76□□□□□ -0.05
TRIM39-204ENST00000396548 EPS15P42566 896 aa14.76□□□□□ -0.05
TRIM39-204ENST00000396548 RBM26Q5T8P6 1007 aaKnown RBP14.76□□□□□ -0.05
TRIM39-204ENST00000396548 KRT40Q6A162 431 aa14.76□□□□□ -0.05
TRIM39-204ENST00000396548 WASF1Q92558 559 aa14.76□□□□□ -0.05
TRIM39-204ENST00000396548 CLIP2Q9UDT6 1046 aa14.76□□□□□ -0.05
TRIM39-204ENST00000396548 DDNO94850 711 aaPredicted RBP14.75□□□□□ -0.05
TRIM39-204ENST00000396548 FOSBP53539 338 aa14.75□□□□□ -0.05
TRIM39-204ENST00000396548 GUCY1B3Q02153 619 aa14.75□□□□□ -0.05
TRIM39-204ENST00000396548 KIF23Q02241 960 aaPredicted RBP14.75□□□□□ -0.05
TRIM39-204ENST00000396548 ABCB5Q2M3G0 1257 aa14.75□□□□□ -0.05
TRIM39-204ENST00000396548 FAM173BQ6P4H8 233 aa14.75□□□□□ -0.05
TRIM39-204ENST00000396548 TRIM22Q8IYM9 498 aa14.75□□□□□ -0.05
TRIM39-204ENST00000396548 KANSL2Q9H9L4 492 aa14.75□□□□□ -0.05
TRIM39-204ENST00000396548 USP17L5A8MUK1 530 aa14.75□□□□□ -0.05
TRIM39-204ENST00000396548 H7C1D1 291 aa14.75□□□□□ -0.05
TRIM39-204ENST00000396548 U2AF2P26368 475 aaKnown RBP eCLIP14.75□□□□□ -0.05
TRIM39-204ENST00000396548 TNNI2P48788 182 aa14.75□□□□□ -0.05
TRIM39-204ENST00000396548 SEPT2Q15019 361 aa14.75□□□□□ -0.05
TRIM39-204ENST00000396548 PPP4R3BQ5MIZ7 849 aa14.75□□□□□ -0.05
TRIM39-204ENST00000396548 CCDC82Q8N4S0 544 aa14.75□□□□□ -0.05
TRIM39-204ENST00000396548 SCAF8Q9UPN6 1271 aaKnown RBP14.75□□□□□ -0.05
TRIM39-204ENST00000396548 V9GY48 417 aaPredicted RBP14.75□□□□□ -0.05
TRIM39-204ENST00000396548 GDF11O95390 407 aa14.75□□□□□ -0.05
TRIM39-204ENST00000396548 SPZ1Q9BXG8 430 aa14.75□□□□□ -0.05
TRIM39-204ENST00000396548 EEF2P13639 858 aaKnown RBP14.74□□□□□ -0.05
TRIM39-204ENST00000396548 VEGFAP15692 232 aaPredicted RBP14.74□□□□□ -0.05
TRIM39-204ENST00000396548 PTMSP20962 102 aa14.74□□□□□ -0.05
TRIM39-204ENST00000396548 GNAQP50148 359 aa14.74□□□□□ -0.05
TRIM39-204ENST00000396548 TNFAIP1Q13829 316 aa14.74□□□□□ -0.05
TRIM39-204ENST00000396548 NPY5RQ15761 445 aa14.74□□□□□ -0.05
TRIM39-204ENST00000396548 PFKFB3Q16875 520 aaPredicted RBP14.74□□□□□ -0.05
TRIM39-204ENST00000396548 LRRC47Q8N1G4 583 aaKnown RBP14.74□□□□□ -0.05
TRIM39-204ENST00000396548 LZTS2Q9BRK4 669 aa14.74□□□□□ -0.05
TRIM39-204ENST00000396548 SYNPO2Q9UMS6 1093 aa14.74□□□□□ -0.05
TRIM39-204ENST00000396548 DOCK1Q14185 1865 aa14.74□□□□□ -0.05
TRIM39-204ENST00000396548 SSC5DA1L4H1 1573 aa14.74□□□□□ -0.05
TRIM39-204ENST00000396548 POLR2AP24928 1970 aaKnown RBP14.74□□□□□ -0.05
TRIM39-204ENST00000396548 MPHOSPH10O00566 681 aaKnown RBP14.74□□□□□ -0.05
TRIM39-204ENST00000396548 MMP1P03956 469 aa14.74□□□□□ -0.05
TRIM39-204ENST00000396548 FOXD4L6Q3SYB3 417 aaPredicted RBP14.74□□□□□ -0.05
TRIM39-204ENST00000396548 USP17L2Q6R6M4 530 aa14.74□□□□□ -0.05
TRIM39-204ENST00000396548 FOXD4L3Q6VB84 417 aaPredicted RBP14.74□□□□□ -0.05
TRIM39-204ENST00000396548 USP48Q86UV5 1035 aa14.74□□□□□ -0.05
TRIM39-204ENST00000396548 L3MBTL3Q96JM7 780 aaPredicted RBP14.74□□□□□ -0.05
TRIM39-204ENST00000396548 PHF20Q9BVI0 1012 aa14.74□□□□□ -0.05
TRIM39-204ENST00000396548 PHIPQ8WWQ0 1821 aa14.73□□□□□ -0.05
TRIM39-204ENST00000396548 TRIM34Q9BYJ4 488 aa14.73□□□□□ -0.05
TRIM39-204ENST00000396548 RIOX1Q9H6W3 641 aa14.73□□□□□ -0.05
TRIM39-204ENST00000396548 WDR90Q96KV7 1748 aa14.73□□□□□ -0.05
TRIM39-204ENST00000396548 GH2P01242 217 aa14.73□□□□□ -0.05
TRIM39-204ENST00000396548 GMCL1P1Q8NEA9 526 aa14.73□□□□□ -0.05
TRIM39-204ENST00000396548 DEFB129Q9H1M3 183 aa14.73□□□□□ -0.05
TRIM39-204ENST00000396548 SCN4AP35499 1836 aa14.73□□□□□ -0.05
TRIM39-204ENST00000396548 KLRF2D3W0D1 207 aa14.73□□□□□ -0.05
TRIM39-204ENST00000396548 TRAK2O60296 914 aa14.73□□□□□ -0.05
TRIM39-204ENST00000396548 PRPF40AO75400 957 aaKnown RBP14.73□□□□□ -0.05
TRIM39-204ENST00000396548 PARP1P09874 1014 aaKnown RBP14.73□□□□□ -0.05
TRIM39-204ENST00000396548 GOLGA8HP0CJ92 632 aa14.73□□□□□ -0.05
TRIM39-204ENST00000396548 PITPNM2Q9BZ72 1349 aa14.72□□□□□ -0.05
TRIM39-204ENST00000396548 ZC3H4Q9UPT8 1303 aaKnown RBP14.72□□□□□ -0.05
TRIM39-204ENST00000396548 hCG_1642624A0A1W2PR95 340 aa14.72□□□□□ -0.05
TRIM39-204ENST00000396548 A0A1W2PRG0 241 aa14.72□□□□□ -0.05
TRIM39-204ENST00000396548 CAP2P40123 477 aa14.72□□□□□ -0.05
TRIM39-204ENST00000396548 ZNF543Q08ER8 600 aa14.72□□□□□ -0.05
TRIM39-204ENST00000396548 ASPRV1Q53RT3 343 aa14.72□□□□□ -0.05
TRIM39-204ENST00000396548 ANGEL2Q5VTE6 544 aaKnown RBP14.72□□□□□ -0.05
TRIM39-204ENST00000396548 GPT2Q8TD30 523 aa14.72□□□□□ -0.05
TRIM39-204ENST00000396548 GDPD2Q9HCC8 539 aa14.72□□□□□ -0.05
TRIM39-204ENST00000396548 ELP1O95163 1332 aa14.72□□□□□ -0.05
TRIM39-204ENST00000396548 MIGA2Q7L4E1 593 aa14.72□□□□□ -0.05
TRIM39-204ENST00000396548 BRAPQ7Z569 592 aa14.72□□□□□ -0.05
TRIM39-204ENST00000396548 APOBEC3FQ8IUX4 373 aaKnown RBP14.72□□□□□ -0.05
TRIM39-204ENST00000396548 ZBTB21Q9ULJ3 1066 aa14.72□□□□□ -0.05
TRIM39-204ENST00000396548 GOLGA6L22H0YM25 854 aa14.71□□□□□ -0.05
TRIM39-204ENST00000396548 SCG2P13521 617 aa14.71□□□□□ -0.05
TRIM39-204ENST00000396548 ICA1Q05084 483 aa14.71□□□□□ -0.05
TRIM39-204ENST00000396548 ATL3Q6DD88 541 aa14.71□□□□□ -0.05
TRIM39-204ENST00000396548 ADARB2Q9NS39 739 aaKnown RBP14.71□□□□□ -0.05
TRIM39-204ENST00000396548 RBM27Q9P2N5 1060 aaKnown RBP14.71□□□□□ -0.05
TRIM39-204ENST00000396548 ZNF112Q9UJU3 913 aa14.71□□□□□ -0.05
TRIM39-204ENST00000396548 KCNJ14Q9UNX9 436 aa14.71□□□□□ -0.05
TRIM39-204ENST00000396548 GADD45BO75293 160 aaPredicted RBP14.71□□□□□ -0.05
TRIM39-204ENST00000396548 TNFRSF25Q93038 417 aa14.71□□□□□ -0.05
TRIM39-204ENST00000396548 MTMR8Q96EF0 704 aa14.71□□□□□ -0.05
TRIM39-204ENST00000396548 SH3GLB2Q9NR46 395 aa14.71□□□□□ -0.05
TRIM39-204ENST00000396548 BAZ2BQ9UIF8 2168 aaKnown RBP14.71□□□□□ -0.06
TRIM39-204ENST00000396548 GMCL1Q96IK5 515 aa14.71□□□□□ -0.06
TRIM39-204ENST00000396548 PPP2R3BQ9Y5P8 575 aa14.71□□□□□ -0.06
TRIM39-204ENST00000396548 KRT85P78386 507 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms