RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 MOV10L1Q9BXT6 1211 aaKnown RBP16.95■□□□□ 0.3
VCPKMT-201ENST00000395859 HMG20BQ9P0W2 317 aa16.95■□□□□ 0.3
VCPKMT-201ENST00000395859 NRBP1Q9UHY1 535 aa16.95■□□□□ 0.3
VCPKMT-201ENST00000395859 USP34Q70CQ2 3546 aa16.94■□□□□ 0.3
VCPKMT-201ENST00000395859 IGFBP4P22692 258 aa16.94■□□□□ 0.3
VCPKMT-201ENST00000395859 SHCBP1Q8NEM2 672 aa16.94■□□□□ 0.3
VCPKMT-201ENST00000395859 KIAA1683Q9H0B3 1180 aa16.94■□□□□ 0.3
VCPKMT-201ENST00000395859 YBX2Q9Y2T7 364 aaKnown RBP16.94■□□□□ 0.3
VCPKMT-201ENST00000395859 FLT1P17948 1338 aa16.94■□□□□ 0.3
VCPKMT-201ENST00000395859 ADAMTS4O75173 837 aa16.93■□□□□ 0.3
VCPKMT-201ENST00000395859 MYCNP04198 464 aaPredicted RBP16.93■□□□□ 0.3
VCPKMT-201ENST00000395859 PPP4CP60510 307 aa16.93■□□□□ 0.3
VCPKMT-201ENST00000395859 RAB30Q15771 203 aa16.93■□□□□ 0.3
VCPKMT-201ENST00000395859 AAK1Q2M2I8 961 aa16.93■□□□□ 0.3
VCPKMT-201ENST00000395859 CCDC184Q52MB2 194 aa16.93■□□□□ 0.3
VCPKMT-201ENST00000395859 PI16Q6UXB8 463 aa16.93■□□□□ 0.3
VCPKMT-201ENST00000395859 CCDC129Q6ZRS4 1044 aa16.93■□□□□ 0.3
VCPKMT-201ENST00000395859 TBC1D9Q6ZT07 1266 aa16.93■□□□□ 0.3
VCPKMT-201ENST00000395859 XAGE2Q96GT9 111 aa16.93■□□□□ 0.3
VCPKMT-201ENST00000395859 MAML3Q96JK9 1138 aa16.93■□□□□ 0.3
VCPKMT-201ENST00000395859 XPNPEP3Q9NQH7 507 aa16.93■□□□□ 0.3
VCPKMT-201ENST00000395859 TLL1O43897 1013 aa16.92■□□□□ 0.3
VCPKMT-201ENST00000395859 PGK1P00558 417 aa16.92■□□□□ 0.3
VCPKMT-201ENST00000395859 GH2P01242 217 aa16.92■□□□□ 0.3
VCPKMT-201ENST00000395859 POU3F3P20264 500 aaPredicted RBP16.92■□□□□ 0.3
VCPKMT-201ENST00000395859 PPIGQ13427 754 aaKnown RBP eCLIP16.92■□□□□ 0.3
VCPKMT-201ENST00000395859 CCSAPQ6IQ19 270 aaPredicted RBP16.92■□□□□ 0.3
VCPKMT-201ENST00000395859 TATDN1Q6P1N9 297 aa16.92■□□□□ 0.3
VCPKMT-201ENST00000395859 ABRAQ8N0Z2 381 aa16.92■□□□□ 0.3
VCPKMT-201ENST00000395859 MRPL50Q8N5N7 158 aaKnown RBP16.92■□□□□ 0.3
VCPKMT-201ENST00000395859 TSPYL2Q9H2G4 693 aaPredicted RBP16.92■□□□□ 0.3
VCPKMT-201ENST00000395859 NKX2-4Q9H2Z4 354 aa16.92■□□□□ 0.3
VCPKMT-201ENST00000395859 COPRSQ9NQ92 184 aa16.92■□□□□ 0.3
VCPKMT-201ENST00000395859 PALD1Q9ULE6 856 aa16.92■□□□□ 0.3
VCPKMT-201ENST00000395859 PA2G4Q9UQ80 394 aaKnown RBP16.92■□□□□ 0.3
VCPKMT-201ENST00000395859 LRRC37A2A6NM11 1700 aa16.91■□□□□ 0.3
VCPKMT-201ENST00000395859 RARBP10826 455 aa16.91■□□□□ 0.3
VCPKMT-201ENST00000395859 ERCC3P19447 782 aa16.91■□□□□ 0.3
VCPKMT-201ENST00000395859 CDK7P50613 346 aa16.91■□□□□ 0.3
VCPKMT-201ENST00000395859 USP14P54578 494 aa16.91■□□□□ 0.3
VCPKMT-201ENST00000395859 ZYXQ15942 572 aaKnown RBP16.91■□□□□ 0.3
VCPKMT-201ENST00000395859 ZNF365Q70YC5 407 aa16.91■□□□□ 0.3
VCPKMT-201ENST00000395859 RNF180Q86T96 592 aa16.91■□□□□ 0.3
VCPKMT-201ENST00000395859 ACER1Q8TDN7 264 aa16.91■□□□□ 0.3
VCPKMT-201ENST00000395859 HERVK_113Q902F9 699 aa16.91■□□□□ 0.3
VCPKMT-201ENST00000395859 TSEN34Q9BSV6 310 aaKnown RBP16.91■□□□□ 0.3
VCPKMT-201ENST00000395859 SPATC1LQ9H0A9 340 aa16.91■□□□□ 0.3
VCPKMT-201ENST00000395859 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.91■□□□□ 0.3
VCPKMT-201ENST00000395859 ZNFX1Q9P2E3 1918 aaKnown RBP16.9■□□□□ 0.3
VCPKMT-201ENST00000395859 BRWD1Q9NSI6 2320 aa16.9■□□□□ 0.3
VCPKMT-201ENST00000395859 A0A1B0GUL7 405 aa16.9■□□□□ 0.3
VCPKMT-201ENST00000395859 DCDC2CA8MYV0 355 aa16.9■□□□□ 0.3
VCPKMT-201ENST00000395859 CSF2RAP15509 400 aa16.9■□□□□ 0.3
VCPKMT-201ENST00000395859 PSRC1Q6PGN9 363 aaPredicted RBP16.9■□□□□ 0.3
VCPKMT-201ENST00000395859 MAPKAPK5Q8IW41 473 aa16.9■□□□□ 0.3
VCPKMT-201ENST00000395859 SPATA5Q8NB90 893 aa16.9■□□□□ 0.3
VCPKMT-201ENST00000395859 KLHDC9Q8NEP7 349 aa16.9■□□□□ 0.3
VCPKMT-201ENST00000395859 TGFBRAP1Q8WUH2 860 aa16.9■□□□□ 0.3
VCPKMT-201ENST00000395859 MSRAQ9UJ68 235 aa16.9■□□□□ 0.3
VCPKMT-201ENST00000395859 PTPRCP08575 1304 aa16.9■□□□□ 0.3
VCPKMT-201ENST00000395859 ZNF865P0CJ78 1059 aaPredicted RBP16.89■□□□□ 0.29
VCPKMT-201ENST00000395859 TAL1P17542 331 aaPredicted RBP16.89■□□□□ 0.29
VCPKMT-201ENST00000395859 ARID4AP29374 1257 aaPredicted RBP16.89■□□□□ 0.29
VCPKMT-201ENST00000395859 ACLYP53396 1101 aa16.89■□□□□ 0.29
VCPKMT-201ENST00000395859 CCDC174Q6PII3 467 aa16.89■□□□□ 0.29
VCPKMT-201ENST00000395859 ADGRA1Q86SQ6 560 aa16.89■□□□□ 0.29
VCPKMT-201ENST00000395859 CRACR2BQ8N4Y2 399 aaPredicted RBP16.89■□□□□ 0.29
VCPKMT-201ENST00000395859 RPAP3Q9H6T3 665 aaPredicted RBP16.89■□□□□ 0.29
VCPKMT-201ENST00000395859 AATFQ9NY61 560 aaKnown RBP eCLIP16.89■□□□□ 0.29
VCPKMT-201ENST00000395859 CFAP54Q96N23 3096 aa16.89■□□□□ 0.29
VCPKMT-201ENST00000395859 ZNF521Q96K83 1311 aa16.89■□□□□ 0.29
VCPKMT-201ENST00000395859 FAM86C2PA6NEL3 165 aa16.88■□□□□ 0.29
VCPKMT-201ENST00000395859 PI4K2BG5E9Z4 385 aa16.88■□□□□ 0.29
VCPKMT-201ENST00000395859 ACRP10323 421 aa16.88■□□□□ 0.29
VCPKMT-201ENST00000395859 MRE11P49959 708 aa16.88■□□□□ 0.29
VCPKMT-201ENST00000395859 MVPQ14764 893 aaKnown RBP16.88■□□□□ 0.29
VCPKMT-201ENST00000395859 FEZ1Q99689 392 aa16.88■□□□□ 0.29
VCPKMT-201ENST00000395859 SLC28A3Q9HAS3 691 aa16.88■□□□□ 0.29
VCPKMT-201ENST00000395859 STARD7Q9NQZ5 370 aa16.88■□□□□ 0.29
VCPKMT-201ENST00000395859 RAI14Q9P0K7 980 aa16.88■□□□□ 0.29
VCPKMT-201ENST00000395859 TRIOO75962 3097 aa16.88■□□□□ 0.29
VCPKMT-201ENST00000395859 GUCY1A2P33402 732 aa16.87■□□□□ 0.29
VCPKMT-201ENST00000395859 LENG1Q96BZ8 264 aaPredicted RBP16.87■□□□□ 0.29
VCPKMT-201ENST00000395859 MROH8Q9H579 483 aa16.87■□□□□ 0.29
VCPKMT-201ENST00000395859 SLC5A4Q9NY91 659 aa16.87■□□□□ 0.29
VCPKMT-201ENST00000395859 MTCH2Q9Y6C9 303 aa16.87■□□□□ 0.29
VCPKMT-201ENST00000395859 MOXD2PA6NHM9 499 aa16.86■□□□□ 0.29
VCPKMT-201ENST00000395859 PLCG2P16885 1265 aa16.86■□□□□ 0.29
VCPKMT-201ENST00000395859 MCAMP43121 646 aa16.86■□□□□ 0.29
VCPKMT-201ENST00000395859 COG2Q14746 738 aa16.86■□□□□ 0.29
VCPKMT-201ENST00000395859 TINF2Q9BSI4 451 aa16.86■□□□□ 0.29
VCPKMT-201ENST00000395859 CD320Q9NPF0 282 aa16.86■□□□□ 0.29
VCPKMT-201ENST00000395859 IL23AQ9NPF7 189 aa16.86■□□□□ 0.29
VCPKMT-201ENST00000395859 CACNA1AO00555 2505 aa16.85■□□□□ 0.29
VCPKMT-201ENST00000395859 BAG3O95817 575 aa16.85■□□□□ 0.29
VCPKMT-201ENST00000395859 TMEM199Q8N511 208 aa16.85■□□□□ 0.29
VCPKMT-201ENST00000395859 NUP133Q8WUM0 1156 aa16.85■□□□□ 0.29
VCPKMT-201ENST00000395859 VWCEQ96DN2 955 aa16.85■□□□□ 0.29
VCPKMT-201ENST00000395859 EHD4Q9H223 541 aa16.85■□□□□ 0.29
VCPKMT-201ENST00000395859 HOXC10Q9NYD6 342 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms