RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 NSD2O96028 1365 aa13.97□□□□□ -0.17
SLC28A1-203ENST00000394573 KDRP35968 1356 aa13.97□□□□□ -0.17
SLC28A1-203ENST00000394573 ABCA6Q8N139 1617 aa13.97□□□□□ -0.17
SLC28A1-203ENST00000394573 MYL6BP14649 208 aa13.97□□□□□ -0.17
SLC28A1-203ENST00000394573 GUCY2FP51841 1108 aa13.97□□□□□ -0.17
SLC28A1-203ENST00000394573 TAF11Q15544 211 aa13.97□□□□□ -0.17
SLC28A1-203ENST00000394573 KCTD19Q17RG1 926 aaPredicted RBP13.97□□□□□ -0.17
SLC28A1-203ENST00000394573 FAM133BQ5BKY9 247 aaKnown RBP13.97□□□□□ -0.17
SLC28A1-203ENST00000394573 RNF220Q5VTB9 566 aa13.97□□□□□ -0.17
SLC28A1-203ENST00000394573 CCDC102BQ68D86 513 aa13.97□□□□□ -0.17
SLC28A1-203ENST00000394573 NAA16Q6N069 864 aaPredicted RBP13.97□□□□□ -0.17
SLC28A1-203ENST00000394573 RINLQ6ZS11 566 aa13.97□□□□□ -0.17
SLC28A1-203ENST00000394573 CACNA2D3Q8IZS8 1091 aa13.97□□□□□ -0.17
SLC28A1-203ENST00000394573 JADE2Q9NQC1 790 aa13.97□□□□□ -0.17
SLC28A1-203ENST00000394573 EHD2Q9NZN4 543 aa13.97□□□□□ -0.17
SLC28A1-203ENST00000394573 ESYT3A0FGR9 886 aa13.97□□□□□ -0.17
SLC28A1-203ENST00000394573 RNF225M0QZC1 329 aaPredicted RBP13.97□□□□□ -0.17
SLC28A1-203ENST00000394573 EPB41P11171 864 aaKnown RBP13.97□□□□□ -0.17
SLC28A1-203ENST00000394573 CEBPAP49715 358 aaPredicted RBP13.97□□□□□ -0.17
SLC28A1-203ENST00000394573 STX17P56962 302 aa13.97□□□□□ -0.17
SLC28A1-203ENST00000394573 ANKRD20A2Q5SQ80 823 aa13.97□□□□□ -0.17
SLC28A1-203ENST00000394573 ANKRD20A1Q5TYW2 823 aa13.97□□□□□ -0.17
SLC28A1-203ENST00000394573 ANKRD20A3Q5VUR7 823 aa13.97□□□□□ -0.17
SLC28A1-203ENST00000394573 ZNF589Q86UQ0 364 aaPredicted RBP13.97□□□□□ -0.17
SLC28A1-203ENST00000394573 PREBQ9HCU5 417 aa13.97□□□□□ -0.17
SLC28A1-203ENST00000394573 ANKIB1Q9P2G1 1089 aa13.97□□□□□ -0.17
SLC28A1-203ENST00000394573 EMILIN1Q9Y6C2 1016 aa13.97□□□□□ -0.17
SLC28A1-203ENST00000394573 LMTK2Q8IWU2 1503 aa13.97□□□□□ -0.17
SLC28A1-203ENST00000394573 hCG_2014768A0A024R1R8 64 aa13.96□□□□□ -0.17
SLC28A1-203ENST00000394573 LRRD1A4D1F6 860 aa13.96□□□□□ -0.17
SLC28A1-203ENST00000394573 GMNCA6NCL1 334 aa13.96□□□□□ -0.17
SLC28A1-203ENST00000394573 FUT4P22083 530 aa13.96□□□□□ -0.17
SLC28A1-203ENST00000394573 KLHL10Q6JEL2 608 aa13.96□□□□□ -0.17
SLC28A1-203ENST00000394573 CNBD1Q8NA66 436 aa13.96□□□□□ -0.17
SLC28A1-203ENST00000394573 RHBDL2Q9NX52 303 aa13.96□□□□□ -0.17
SLC28A1-203ENST00000394573 GGT7Q9UJ14 662 aa13.96□□□□□ -0.17
SLC28A1-203ENST00000394573 TUBE1Q9UJT0 475 aa13.96□□□□□ -0.17
SLC28A1-203ENST00000394573 UNC13BO14795 1591 aa13.96□□□□□ -0.17
SLC28A1-203ENST00000394573 MFAP3LO75121 409 aa13.96□□□□□ -0.17
SLC28A1-203ENST00000394573 FAM153BP0C7A2 387 aa13.96□□□□□ -0.17
SLC28A1-203ENST00000394573 FAM153CQ494X1 144 aa13.96□□□□□ -0.17
SLC28A1-203ENST00000394573 CFAP58Q5T655 872 aa13.96□□□□□ -0.17
SLC28A1-203ENST00000394573 METTL16Q86W50 562 aaKnown RBP13.96□□□□□ -0.17
SLC28A1-203ENST00000394573 ARHGEF1Q92888 912 aaKnown RBP13.96□□□□□ -0.17
SLC28A1-203ENST00000394573 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.96□□□□□ -0.17
SLC28A1-203ENST00000394573 FAM153AQ9UHL3 310 aa13.96□□□□□ -0.17
SLC28A1-203ENST00000394573 SBNO1A3KN83 1393 aa13.96□□□□□ -0.18
SLC28A1-203ENST00000394573 RASSF10A6NK89 507 aa13.95□□□□□ -0.18
SLC28A1-203ENST00000394573 A6NNZ2 444 aa13.95□□□□□ -0.18
SLC28A1-203ENST00000394573 NR1I3Q14994 352 aa13.95□□□□□ -0.18
SLC28A1-203ENST00000394573 TUBB8Q3ZCM7 444 aa13.95□□□□□ -0.18
SLC28A1-203ENST00000394573 CHST3Q7LGC8 479 aa13.95□□□□□ -0.18
SLC28A1-203ENST00000394573 CHP1Q99653 195 aa13.95□□□□□ -0.18
SLC28A1-203ENST00000394573 SLX1AQ9BQ83 275 aa13.95□□□□□ -0.18
SLC28A1-203ENST00000394573 SYT15Q9BQS2 421 aa13.95□□□□□ -0.18
SLC28A1-203ENST00000394573 IQGAP3Q86VI3 1631 aa13.95□□□□□ -0.18
SLC28A1-203ENST00000394573 LRRC10BA6NIK2 292 aa13.95□□□□□ -0.18
SLC28A1-203ENST00000394573 GLRX3O76003 335 aaKnown RBP13.95□□□□□ -0.18
SLC28A1-203ENST00000394573 UBTFL1P0CB47 393 aaPredicted RBP13.95□□□□□ -0.18
SLC28A1-203ENST00000394573 KCNJ2P63252 427 aa13.95□□□□□ -0.18
SLC28A1-203ENST00000394573 MAATS1Q7Z4T9 603 aa13.95□□□□□ -0.18
SLC28A1-203ENST00000394573 RAB11FIP4Q86YS3 637 aa13.95□□□□□ -0.18
SLC28A1-203ENST00000394573 CCT6BQ92526 530 aa13.95□□□□□ -0.18
SLC28A1-203ENST00000394573 PREX1Q8TCU6 1659 aa13.95□□□□□ -0.18
SLC28A1-203ENST00000394573 ZSCAN5CA6NGD5 496 aaPredicted RBP13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 DNAJC8O75937 253 aaPredicted RBP13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 GYPCP04921 128 aa13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 CHGBP05060 677 aa13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 ALDH1B1P30837 517 aa13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 ADAM9Q13443 819 aa13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 SLC9C2Q5TAH2 1124 aa13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 GRAMD1CQ8IYS0 662 aa13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 IFT81Q8WYA0 676 aa13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 RBM33Q96EV2 1170 aaKnown RBP13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 NEK1Q96PY6 1258 aa13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 MED15Q96RN5 788 aa13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 GALNT8Q9NY28 637 aa13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 WDR35Q9P2L0 1181 aa13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 STK38LQ9Y2H1 464 aa13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 STXBP3O00186 592 aa13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 CD151P48509 253 aa13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 CPLX4Q7Z7G2 160 aa13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 CCDC170Q8IYT3 715 aa13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 KCNG4Q8TDN1 519 aa13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 NDST4Q9H3R1 872 aa13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 U3KPZ7 1027 aaPredicted RBP13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 PPIP5K2O43314 1243 aa13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 CREB3O43889 395 aa13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 ZNF18P17022 549 aa13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 KIF5BP33176 963 aa13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 CCT6AP40227 531 aaKnown RBP13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 ALS2CLQ60I27 953 aa13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 CRELD2Q6UXH1 353 aaPredicted RBP13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 ABCF2Q9UG63 623 aa13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 PHF8Q9UPP1 1060 aa13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 REXO2Q9Y3B8 237 aaKnown RBP13.94□□□□□ -0.18
SLC28A1-203ENST00000394573 CXCR5P32302 372 aa13.93□□□□□ -0.18
SLC28A1-203ENST00000394573 GNAQP50148 359 aa13.93□□□□□ -0.18
SLC28A1-203ENST00000394573 HSP90AB4PQ58FF6 505 aa13.93□□□□□ -0.18
SLC28A1-203ENST00000394573 ZMYM1Q5SVZ6 1142 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms