RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 DIXDC1Q155Q3 683 aa22.29■■□□□ 1.16
RCCD1-201ENST00000394258 NT5DC1Q5TFE4 455 aa22.29■■□□□ 1.16
RCCD1-201ENST00000394258 DNAI1Q9UI46 699 aa22.29■■□□□ 1.16
RCCD1-201ENST00000394258 FAM177A1Q8N128 213 aaPredicted RBP22.29■■□□□ 1.16
RCCD1-201ENST00000394258 ERO1AQ96HE7 468 aa22.29■■□□□ 1.16
RCCD1-201ENST00000394258 CASZ1Q86V15 1759 aa22.29■■□□□ 1.16
RCCD1-201ENST00000394258 PCP11498 1178 aaKnown RBP22.28■■□□□ 1.16
RCCD1-201ENST00000394258 MCM7P33993 719 aa22.28■■□□□ 1.16
RCCD1-201ENST00000394258 USP5P45974 858 aa22.28■■□□□ 1.16
RCCD1-201ENST00000394258 TFAP4Q01664 338 aa22.28■■□□□ 1.16
RCCD1-201ENST00000394258 NFIXQ14938 502 aa22.28■■□□□ 1.16
RCCD1-201ENST00000394258 GRIK5Q16478 980 aa22.28■■□□□ 1.16
RCCD1-201ENST00000394258 TMX1Q9H3N1 280 aa22.28■■□□□ 1.16
RCCD1-201ENST00000394258 COBLO75128 1261 aa22.28■■□□□ 1.16
RCCD1-201ENST00000394258 ADKP55263 362 aaKnown RBP22.28■■□□□ 1.16
RCCD1-201ENST00000394258 ERCC6LQ2NKX8 1250 aa22.28■■□□□ 1.16
RCCD1-201ENST00000394258 KANK3Q6NY19 840 aa22.28■■□□□ 1.16
RCCD1-201ENST00000394258 FBXO38Q6PIJ6 1188 aa22.28■■□□□ 1.16
RCCD1-201ENST00000394258 ELOA2Q8IYF1 753 aaPredicted RBP22.28■■□□□ 1.16
RCCD1-201ENST00000394258 SCG2P13521 617 aa22.27■■□□□ 1.16
RCCD1-201ENST00000394258 RCSD1Q6JBY9 416 aa22.27■■□□□ 1.16
RCCD1-201ENST00000394258 TMEM139Q8IV31 216 aa22.27■■□□□ 1.16
RCCD1-201ENST00000394258 GPKOWQ92917 476 aaPredicted RBP eCLIP22.27■■□□□ 1.168e-10■□□□□ 8.7
RCCD1-201ENST00000394258 TNFRSF25Q93038 417 aa22.27■■□□□ 1.16
RCCD1-201ENST00000394258 PAGE5Q96GU1 130 aa22.27■■□□□ 1.16
RCCD1-201ENST00000394258 ARPP21Q9UBL0 812 aaPredicted RBP22.27■■□□□ 1.16
RCCD1-201ENST00000394258 SCN7AQ01118 1682 aa22.27■■□□□ 1.16
RCCD1-201ENST00000394258 SH3RF3Q8TEJ3 882 aaPredicted RBP22.27■■□□□ 1.16
RCCD1-201ENST00000394258 OGFRQ9NZT2 677 aa22.27■■□□□ 1.16
RCCD1-201ENST00000394258 KIF2AO00139 706 aaPredicted RBP22.26■■□□□ 1.15
RCCD1-201ENST00000394258 ENOX1Q8TC92 643 aaKnown RBP22.26■■□□□ 1.15
RCCD1-201ENST00000394258 DACH1Q9UI36 760 aa22.26■■□□□ 1.15
RCCD1-201ENST00000394258 SLFN14P0C7P3 912 aa22.26■■□□□ 1.15
RCCD1-201ENST00000394258 CD44P16070 742 aaKnown RBP22.26■■□□□ 1.15
RCCD1-201ENST00000394258 RFC4P35249 363 aa22.26■■□□□ 1.15
RCCD1-201ENST00000394258 RC3H1Q5TC82 1133 aaKnown RBP22.26■■□□□ 1.15
RCCD1-201ENST00000394258 TRIM65Q6PJ69 517 aa22.26■■□□□ 1.15
RCCD1-201ENST00000394258 REXO1L1PQ8IX06 675 aa22.26■■□□□ 1.15
RCCD1-201ENST00000394258 STAG2Q8N3U4 1231 aa22.26■■□□□ 1.15
RCCD1-201ENST00000394258 USP17L3A6NCW0 530 aa22.25■■□□□ 1.15
RCCD1-201ENST00000394258 USP17L4A6NCW7 530 aa22.25■■□□□ 1.15
RCCD1-201ENST00000394258 LDHBP07195 334 aaKnown RBP22.25■■□□□ 1.15
RCCD1-201ENST00000394258 ZNF18P17022 549 aa22.25■■□□□ 1.15
RCCD1-201ENST00000394258 CDC25AP30304 524 aa22.25■■□□□ 1.15
RCCD1-201ENST00000394258 VPS72Q15906 364 aa22.25■■□□□ 1.15
RCCD1-201ENST00000394258 USP17L1Q7RTZ2 530 aa22.25■■□□□ 1.15
RCCD1-201ENST00000394258 SLC44A5Q8NCS7 719 aa22.25■■□□□ 1.15
RCCD1-201ENST00000394258 RASGRP4Q8TDF6 673 aa22.25■■□□□ 1.15
RCCD1-201ENST00000394258 BLZF1Q9H2G9 400 aa22.25■■□□□ 1.15
RCCD1-201ENST00000394258 KAT14Q9H8E8 782 aa22.25■■□□□ 1.15
RCCD1-201ENST00000394258 L2HGDHQ9H9P8 463 aa22.25■■□□□ 1.15
RCCD1-201ENST00000394258 KCNJ6P48051 423 aa22.25■■□□□ 1.15
RCCD1-201ENST00000394258 CCDC93Q567U6 631 aa22.25■■□□□ 1.15
RCCD1-201ENST00000394258 IL17RBQ9NRM6 502 aa22.25■■□□□ 1.15
RCCD1-201ENST00000394258 ETF1P62495 437 aaKnown RBP22.24■■□□□ 1.15
RCCD1-201ENST00000394258 SPATA20Q8TB22 786 aa22.24■■□□□ 1.15
RCCD1-201ENST00000394258 FERMT2Q96AC1 680 aa22.24■■□□□ 1.15
RCCD1-201ENST00000394258 FEZ1Q99689 392 aa22.24■■□□□ 1.15
RCCD1-201ENST00000394258 MKNK2Q9HBH9 465 aa22.24■■□□□ 1.15
RCCD1-201ENST00000394258 SAP30BPQ9UHR5 308 aaKnown RBP22.24■■□□□ 1.15
RCCD1-201ENST00000394258 DDX41Q9UJV9 622 aaKnown RBP22.24■■□□□ 1.15
RCCD1-201ENST00000394258 PLCD1P51178 756 aa22.24■■□□□ 1.15
RCCD1-201ENST00000394258 TRIML1Q8N9V2 468 aa22.24■■□□□ 1.15
RCCD1-201ENST00000394258 ZNF397Q8NF99 534 aaPredicted RBP22.24■■□□□ 1.15
RCCD1-201ENST00000394258 TGFBRAP1Q8WUH2 860 aa22.24■■□□□ 1.15
RCCD1-201ENST00000394258 PFKFB3Q16875 520 aaPredicted RBP22.24■■□□□ 1.15
RCCD1-201ENST00000394258 TOM1O60784 492 aa22.23■■□□□ 1.15
RCCD1-201ENST00000394258 TBX2Q13207 712 aaPredicted RBP22.23■■□□□ 1.15
RCCD1-201ENST00000394258 SBK1Q52WX2 424 aa22.23■■□□□ 1.15
RCCD1-201ENST00000394258 PNMA1Q8ND90 353 aa22.23■■□□□ 1.15
RCCD1-201ENST00000394258 IL17AQ16552 155 aa22.23■■□□□ 1.15
RCCD1-201ENST00000394258 C12orf60Q5U649 245 aa22.23■■□□□ 1.15
RCCD1-201ENST00000394258 SPTY2D1Q68D10 685 aaPredicted RBP22.23■■□□□ 1.15
RCCD1-201ENST00000394258 TOGARAM2Q6ZUX3 1019 aa22.23■■□□□ 1.15
RCCD1-201ENST00000394258 TC2NQ8N9U0 490 aa22.23■■□□□ 1.15
RCCD1-201ENST00000394258 CCDC34Q96HJ3 373 aa22.23■■□□□ 1.15
RCCD1-201ENST00000394258 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.23■■□□□ 1.154e-7■■□□□ 13.7
RCCD1-201ENST00000394258 TEX33O43247 280 aa22.22■■□□□ 1.15
RCCD1-201ENST00000394258 ATP2C1P98194 919 aaPredicted RBP22.22■■□□□ 1.15
RCCD1-201ENST00000394258 MAPK8IP2Q13387 824 aaPredicted RBP22.22■■□□□ 1.15
RCCD1-201ENST00000394258 SPECC1LQ69YQ0 1117 aa22.22■■□□□ 1.15
RCCD1-201ENST00000394258 MYO1BO43795 1136 aa22.22■■□□□ 1.15
RCCD1-201ENST00000394258 DHX8Q14562 1220 aaKnown RBP22.22■■□□□ 1.15
RCCD1-201ENST00000394258 MAPKAPK5Q8IW41 473 aa22.22■■□□□ 1.15
RCCD1-201ENST00000394258 BAG1Q99933 345 aaPredicted RBP22.22■■□□□ 1.15
RCCD1-201ENST00000394258 PPP2R2CQ9Y2T4 447 aa22.22■■□□□ 1.15
RCCD1-201ENST00000394258 PDS5AQ29RF7 1337 aaKnown RBP22.21■■□□□ 1.15
RCCD1-201ENST00000394258 VGLL3A8MV65 326 aa22.21■■□□□ 1.15
RCCD1-201ENST00000394258 KIF5BP33176 963 aa22.21■■□□□ 1.15
RCCD1-201ENST00000394258 DPYDQ12882 1025 aa22.21■■□□□ 1.15
RCCD1-201ENST00000394258 TRAPPC3LQ5T215 181 aa22.21■■□□□ 1.15
RCCD1-201ENST00000394258 FAM196AQ6ZSG2 479 aa22.21■■□□□ 1.15
RCCD1-201ENST00000394258 CPLX3Q8WVH0 158 aa22.21■■□□□ 1.15
RCCD1-201ENST00000394258 STX8Q9UNK0 236 aa22.21■■□□□ 1.15
RCCD1-201ENST00000394258 EP400Q96L91 3159 aa22.21■■□□□ 1.15
RCCD1-201ENST00000394258 FAM205AQ6ZU69 1335 aa22.21■■□□□ 1.15
RCCD1-201ENST00000394258 LTBP4Q8N2S1 1624 aa22.21■■□□□ 1.15
RCCD1-201ENST00000394258 BMP15O95972 392 aa22.21■■□□□ 1.15
RCCD1-201ENST00000394258 RASGRP2Q7LDG7 609 aa22.21■■□□□ 1.15
RCCD1-201ENST00000394258 SH3RF1Q7Z6J0 888 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms