RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 PFKFB3Q16875 520 aaPredicted RBP20.66■□□□□ 0.9
CLDND1-204ENST00000394185 SHROOM1Q2M3G4 852 aaPredicted RBP20.66■□□□□ 0.9
CLDND1-204ENST00000394185 USP17L2Q6R6M4 530 aa20.66■□□□□ 0.9
CLDND1-204ENST00000394185 SH3BP5LQ7L8J4 393 aa20.66■□□□□ 0.9
CLDND1-204ENST00000394185 RTKN2Q8IZC4 609 aa20.66■□□□□ 0.9
CLDND1-204ENST00000394185 FMR1NBQ8N0W7 255 aaPredicted RBP20.66■□□□□ 0.9
CLDND1-204ENST00000394185 ERCC4Q92889 916 aaPredicted RBP20.66■□□□□ 0.9
CLDND1-204ENST00000394185 CLIC6Q96NY7 704 aa20.66■□□□□ 0.9
CLDND1-204ENST00000394185 MRIQ9BWK5 157 aa20.66■□□□□ 0.9
CLDND1-204ENST00000394185 SERPINA10Q9UK55 444 aa20.66■□□□□ 0.9
CLDND1-204ENST00000394185 PCDHB6Q9Y5E3 794 aa20.66■□□□□ 0.9
CLDND1-204ENST00000394185 A0A1W2PQ27 194 aa20.65■□□□□ 0.9
CLDND1-204ENST00000394185 A0A1W2PQ64 194 aa20.65■□□□□ 0.9
CLDND1-204ENST00000394185 A0A1W2PQD8 194 aa20.65■□□□□ 0.9
CLDND1-204ENST00000394185 LARGE2Q8N3Y3 721 aa20.65■□□□□ 0.9
CLDND1-204ENST00000394185 PSMD1Q99460 953 aa20.65■□□□□ 0.9
CLDND1-204ENST00000394185 TDRD3Q9H7E2 651 aaKnown RBP20.65■□□□□ 0.9
CLDND1-204ENST00000394185 PALM3A6NDB9 673 aaPredicted RBP20.65■□□□□ 0.9
CLDND1-204ENST00000394185 WNT7AO00755 349 aa20.65■□□□□ 0.9
CLDND1-204ENST00000394185 XBP1P17861 261 aa20.65■□□□□ 0.9
CLDND1-204ENST00000394185 HDLBPQ00341 1268 aaKnown RBP20.65■□□□□ 0.9
CLDND1-204ENST00000394185 PRMT6Q96LA8 375 aaPredicted RBP20.65■□□□□ 0.9
CLDND1-204ENST00000394185 PPP1R1BQ9UD71 204 aaPredicted RBP20.65■□□□□ 0.9
CLDND1-204ENST00000394185 ZBTB12Q9Y330 459 aaPredicted RBP20.65■□□□□ 0.9
CLDND1-204ENST00000394185 PSMD14O00487 310 aa20.64■□□□□ 0.89
CLDND1-204ENST00000394185 KRT2P35908 639 aa20.64■□□□□ 0.89
CLDND1-204ENST00000394185 NOVP48745 357 aa20.64■□□□□ 0.89
CLDND1-204ENST00000394185 TYRO3Q06418 890 aa20.64■□□□□ 0.89
CLDND1-204ENST00000394185 CFAP100Q494V2 611 aa20.64■□□□□ 0.89
CLDND1-204ENST00000394185 TYW1BQ6NUM6 668 aa20.64■□□□□ 0.89
CLDND1-204ENST00000394185 LRRC47Q8N1G4 583 aaKnown RBP20.64■□□□□ 0.89
CLDND1-204ENST00000394185 MTMR4Q9NYA4 1195 aa20.64■□□□□ 0.89
CLDND1-204ENST00000394185 MRVI1Q9Y6F6 885 aa20.64■□□□□ 0.89
CLDND1-204ENST00000394185 CCDC192P0DO97 292 aa20.63■□□□□ 0.89
CLDND1-204ENST00000394185 PLIN4Q96Q06 1357 aa20.63■□□□□ 0.89
CLDND1-204ENST00000394185 KIF13BQ9NQT8 1826 aa20.63■□□□□ 0.89
CLDND1-204ENST00000394185 A0A087WWV3 80 aa20.63■□□□□ 0.89
CLDND1-204ENST00000394185 IGKV6D-41A0A0C4DH26 115 aa20.63■□□□□ 0.89
CLDND1-204ENST00000394185 USP17L5A8MUK1 530 aa20.63■□□□□ 0.89
CLDND1-204ENST00000394185 TOP1P11387 765 aaKnown RBP20.63■□□□□ 0.89
CLDND1-204ENST00000394185 GRIN1Q05586 938 aa20.63■□□□□ 0.89
CLDND1-204ENST00000394185 SHC4Q6S5L8 630 aa20.63■□□□□ 0.89
CLDND1-204ENST00000394185 TNFRSF25Q93038 417 aa20.63■□□□□ 0.89
CLDND1-204ENST00000394185 IDI2Q9BXS1 227 aa20.63■□□□□ 0.89
CLDND1-204ENST00000394185 SIPA1L1O43166 1804 aa20.62■□□□□ 0.89
CLDND1-204ENST00000394185 KLRF2D3W0D1 207 aa20.62■□□□□ 0.89
CLDND1-204ENST00000394185 KINO60870 393 aaKnown RBP20.62■□□□□ 0.89
CLDND1-204ENST00000394185 PPP6R2O75170 966 aa20.62■□□□□ 0.89
CLDND1-204ENST00000394185 HLA-DOAP06340 250 aa20.62■□□□□ 0.89
CLDND1-204ENST00000394185 PFKFB1P16118 471 aa20.62■□□□□ 0.89
CLDND1-204ENST00000394185 R3HDM1Q15032 1099 aaKnown RBP20.62■□□□□ 0.89
CLDND1-204ENST00000394185 RILPL1Q5EBL4 403 aa20.62■□□□□ 0.89
CLDND1-204ENST00000394185 SPECC1Q5M775 1068 aa20.62■□□□□ 0.89
CLDND1-204ENST00000394185 ZSCAN29Q8IWY8 852 aaPredicted RBP20.62■□□□□ 0.89
CLDND1-204ENST00000394185 SWAP70Q9UH65 585 aa20.62■□□□□ 0.89
CLDND1-204ENST00000394185 MPHOSPH10O00566 681 aaKnown RBP20.61■□□□□ 0.89
CLDND1-204ENST00000394185 RSBN1LQ6PCB5 846 aaPredicted RBP20.61■□□□□ 0.89
CLDND1-204ENST00000394185 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.61■□□□□ 0.89
CLDND1-204ENST00000394185 PIM2Q9P1W9 311 aa20.61■□□□□ 0.89
CLDND1-204ENST00000394185 FRMPD2Q68DX3 1309 aaPredicted RBP20.61■□□□□ 0.89
CLDND1-204ENST00000394185 MYH8P13535 1937 aa20.61■□□□□ 0.89
CLDND1-204ENST00000394185 PARP1P09874 1014 aaKnown RBP20.61■□□□□ 0.89
CLDND1-204ENST00000394185 CMA1P23946 247 aa20.61■□□□□ 0.89
CLDND1-204ENST00000394185 NLRP5P59047 1200 aa20.61■□□□□ 0.89
CLDND1-204ENST00000394185 WWC2Q6AWC2 1192 aa20.61■□□□□ 0.89
CLDND1-204ENST00000394185 CLIP2Q9UDT6 1046 aa20.61■□□□□ 0.89
CLDND1-204ENST00000394185 CCDC173Q0VFZ6 552 aa20.6■□□□□ 0.89
CLDND1-204ENST00000394185 PPP1R9BQ96SB3 815 aa20.6■□□□□ 0.89
CLDND1-204ENST00000394185 MTFR1LQ9H019 292 aa20.6■□□□□ 0.89
CLDND1-204ENST00000394185 PDHBP11177 359 aa20.59■□□□□ 0.89
CLDND1-204ENST00000394185 GNAQP50148 359 aa20.59■□□□□ 0.89
CLDND1-204ENST00000394185 ANO6Q4KMQ2 910 aa20.59■□□□□ 0.89
CLDND1-204ENST00000394185 GRIPAP1Q4V328 841 aa20.59■□□□□ 0.89
CLDND1-204ENST00000394185 CCDC125Q86Z20 511 aa20.59■□□□□ 0.89
CLDND1-204ENST00000394185 KLHL34Q8N239 644 aa20.59■□□□□ 0.89
CLDND1-204ENST00000394185 ANP32BQ92688 251 aaKnown RBP20.59■□□□□ 0.89
CLDND1-204ENST00000394185 UBA5Q9GZZ9 404 aa20.59■□□□□ 0.89
CLDND1-204ENST00000394185 EHD4Q9H223 541 aa20.59■□□□□ 0.89
CLDND1-204ENST00000394185 ZNF202O95125 648 aa20.59■□□□□ 0.89
CLDND1-204ENST00000394185 VIL1P09327 827 aaKnown RBP20.59■□□□□ 0.89
CLDND1-204ENST00000394185 TGFB2P61812 414 aa20.59■□□□□ 0.89
CLDND1-204ENST00000394185 HEATR3Q7Z4Q2 680 aa20.59■□□□□ 0.89
CLDND1-204ENST00000394185 HOMER1Q86YM7 354 aa20.59■□□□□ 0.89
CLDND1-204ENST00000394185 RASGRP4Q8TDF6 673 aa20.59■□□□□ 0.89
CLDND1-204ENST00000394185 GMLQ99445 158 aa20.59■□□□□ 0.89
CLDND1-204ENST00000394185 CLRN2A0PK11 232 aa20.58■□□□□ 0.89
CLDND1-204ENST00000394185 JMYQ8N9B5 988 aa20.58■□□□□ 0.89
CLDND1-204ENST00000394185 VAT1LQ9HCJ6 419 aa20.58■□□□□ 0.89
CLDND1-204ENST00000394185 PI4KBQ9UBF8 816 aa20.58■□□□□ 0.89
CLDND1-204ENST00000394185 FBXO2Q9UK22 296 aaPredicted RBP20.58■□□□□ 0.89
CLDND1-204ENST00000394185 PSME4Q14997 1843 aa20.58■□□□□ 0.88
CLDND1-204ENST00000394185 TTLL1O95922 423 aa20.58■□□□□ 0.88
CLDND1-204ENST00000394185 POLD1P28340 1107 aa20.58■□□□□ 0.88
CLDND1-204ENST00000394185 ATP2B2Q01814 1243 aa20.58■□□□□ 0.88
CLDND1-204ENST00000394185 PIK3AP1Q6ZUJ8 805 aa20.58■□□□□ 0.88
CLDND1-204ENST00000394185 KRI1Q8N9T8 703 aaKnown RBP20.58■□□□□ 0.88
CLDND1-204ENST00000394185 DHX36Q9H2U1 1008 aaKnown RBP20.58■□□□□ 0.88
CLDND1-204ENST00000394185 BRMS1Q9HCU9 246 aa20.58■□□□□ 0.88
CLDND1-204ENST00000394185 USP25Q9UHP3 1055 aa20.58■□□□□ 0.88
CLDND1-204ENST00000394185 HPSEQ9Y251 543 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms