RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 RBM27Q9P2N5 1060 aaKnown RBP20.24■□□□□ 0.83
MBD4-202ENST00000393278 CNTNAP1P78357 1384 aa20.24■□□□□ 0.83
MBD4-202ENST00000393278 WNT10BO00744 389 aa20.23■□□□□ 0.83
MBD4-202ENST00000393278 MYO1BO43795 1136 aa20.23■□□□□ 0.83
MBD4-202ENST00000393278 XBP1P17861 261 aa20.23■□□□□ 0.83
MBD4-202ENST00000393278 CERKLQ49MI3 558 aaPredicted RBP20.23■□□□□ 0.83
MBD4-202ENST00000393278 LZTS2Q9BRK4 669 aa20.23■□□□□ 0.83
MBD4-202ENST00000393278 KCNJ14Q9UNX9 436 aa20.23■□□□□ 0.83
MBD4-202ENST00000393278 hCG_1642624A0A1W2PR95 340 aa20.22■□□□□ 0.83
MBD4-202ENST00000393278 SHTN1A0MZ66 631 aa20.22■□□□□ 0.83
MBD4-202ENST00000393278 MPHOSPH10O00566 681 aaKnown RBP20.22■□□□□ 0.83
MBD4-202ENST00000393278 SAFBQ15424 915 aaKnown RBP eCLIP20.22■□□□□ 0.83
MBD4-202ENST00000393278 FAM83AQ86UY5 434 aa20.22■□□□□ 0.83
MBD4-202ENST00000393278 DPF2Q92785 391 aa20.22■□□□□ 0.83
MBD4-202ENST00000393278 SHISA4Q96DD7 197 aa20.22■□□□□ 0.83
MBD4-202ENST00000393278 FTOQ9C0B1 505 aaKnown RBP eCLIP20.22■□□□□ 0.83
MBD4-202ENST00000393278 VEZTQ9HBM0 779 aa20.22■□□□□ 0.83
MBD4-202ENST00000393278 HERC5Q9UII4 1024 aaKnown RBP20.22■□□□□ 0.83
MBD4-202ENST00000393278 RCOR1Q9UKL0 485 aa20.22■□□□□ 0.83
MBD4-202ENST00000393278 MTMR7Q9Y216 660 aa20.22■□□□□ 0.83
MBD4-202ENST00000393278 GMPSP49915 693 aaPredicted RBP20.22■□□□□ 0.83
MBD4-202ENST00000393278 GNL2Q13823 731 aaKnown RBP20.22■□□□□ 0.83
MBD4-202ENST00000393278 PFKFB3Q16875 520 aaPredicted RBP20.22■□□□□ 0.83
MBD4-202ENST00000393278 CLEC10AQ8IUN9 316 aa20.22■□□□□ 0.83
MBD4-202ENST00000393278 DIS3L2Q8IYB7 885 aaKnown RBP20.22■□□□□ 0.83
MBD4-202ENST00000393278 RTEL1Q9NZ71 1219 aa20.22■□□□□ 0.83
MBD4-202ENST00000393278 VPS54Q9P1Q0 977 aa20.22■□□□□ 0.83
MBD4-202ENST00000393278 TMEM63CQ9P1W3 806 aa20.22■□□□□ 0.83
MBD4-202ENST00000393278 CLIP2Q9UDT6 1046 aa20.22■□□□□ 0.83
MBD4-202ENST00000393278 PARP1P09874 1014 aaKnown RBP20.21■□□□□ 0.83
MBD4-202ENST00000393278 SCG2P13521 617 aa20.21■□□□□ 0.83
MBD4-202ENST00000393278 CEBPZQ03701 1054 aaKnown RBP20.21■□□□□ 0.83
MBD4-202ENST00000393278 NBPF9Q3BBW0 867 aa20.21■□□□□ 0.83
MBD4-202ENST00000393278 LRRC47Q8N1G4 583 aaKnown RBP20.21■□□□□ 0.83
MBD4-202ENST00000393278 PHF20Q9BVI0 1012 aa20.21■□□□□ 0.83
MBD4-202ENST00000393278 FOXP1Q9H334 677 aaPredicted RBP20.21■□□□□ 0.83
MBD4-202ENST00000393278 KLRF2D3W0D1 207 aa20.2■□□□□ 0.82
MBD4-202ENST00000393278 PDHBP11177 359 aa20.2■□□□□ 0.82
MBD4-202ENST00000393278 SLC35G1Q2M3R5 365 aa20.2■□□□□ 0.82
MBD4-202ENST00000393278 USP17L2Q6R6M4 530 aa20.2■□□□□ 0.82
MBD4-202ENST00000393278 ARHGAP27Q6ZUM4 889 aa20.2■□□□□ 0.82
MBD4-202ENST00000393278 RASGRP2Q7LDG7 609 aa20.2■□□□□ 0.82
MBD4-202ENST00000393278 SPZ1Q9BXG8 430 aa20.2■□□□□ 0.82
MBD4-202ENST00000393278 POLR3EQ9NVU0 708 aa20.2■□□□□ 0.82
MBD4-202ENST00000393278 GJA3Q9Y6H8 435 aa20.2■□□□□ 0.82
MBD4-202ENST00000393278 ZNF541Q9H0D2 1346 aa20.2■□□□□ 0.82
MBD4-202ENST00000393278 BTBD18B2RXH4 712 aa20.19■□□□□ 0.82
MBD4-202ENST00000393278 CYTH3O43739 400 aa20.19■□□□□ 0.82
MBD4-202ENST00000393278 GOLGA8HP0CJ92 632 aa20.19■□□□□ 0.82
MBD4-202ENST00000393278 SNHG28P0DPA3 235 aa20.19■□□□□ 0.82
MBD4-202ENST00000393278 SMARCA1P28370 1054 aa20.19■□□□□ 0.82
MBD4-202ENST00000393278 ZSCAN23Q3MJ62 389 aa20.19■□□□□ 0.82
MBD4-202ENST00000393278 TMEM179Q6ZVK1 233 aa20.19■□□□□ 0.82
MBD4-202ENST00000393278 NOSTRINQ8IVI9 506 aa20.19■□□□□ 0.82
MBD4-202ENST00000393278 MICALL2Q8IY33 904 aa20.19■□□□□ 0.82
MBD4-202ENST00000393278 SYAP1Q96A49 352 aaPredicted RBP20.19■□□□□ 0.82
MBD4-202ENST00000393278 USP17L5A8MUK1 530 aa20.19■□□□□ 0.82
MBD4-202ENST00000393278 YEATS4O95619 227 aa20.19■□□□□ 0.82
MBD4-202ENST00000393278 LMNB1P20700 586 aa20.19■□□□□ 0.82
MBD4-202ENST00000393278 NASPP49321 788 aaPredicted RBP20.19■□□□□ 0.82
MBD4-202ENST00000393278 ABCB5Q2M3G0 1257 aa20.19■□□□□ 0.82
MBD4-202ENST00000393278 PGBD1Q96JS3 809 aa20.19■□□□□ 0.82
MBD4-202ENST00000393278 KANSL2Q9H9L4 492 aa20.19■□□□□ 0.82
MBD4-202ENST00000393278 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.19■□□□□ 0.82
MBD4-202ENST00000393278 NYAP2Q9P242 653 aa20.19■□□□□ 0.82
MBD4-202ENST00000393278 EGFRP00533 1210 aa20.18■□□□□ 0.82
MBD4-202ENST00000393278 SHROOM1Q2M3G4 852 aaPredicted RBP20.18■□□□□ 0.82
MBD4-202ENST00000393278 ASPRV1Q53RT3 343 aa20.18■□□□□ 0.82
MBD4-202ENST00000393278 LINC00301Q8NCQ3 95 aa20.18■□□□□ 0.82
MBD4-202ENST00000393278 TMEM39BQ9GZU3 492 aa20.18■□□□□ 0.82
MBD4-202ENST00000393278 CNOT7Q9UIV1 285 aaKnown RBP20.18■□□□□ 0.82
MBD4-202ENST00000393278 CLIC4Q9Y696 253 aa20.18■□□□□ 0.82
MBD4-202ENST00000393278 GOLGA6L4A6NEF3 574 aa20.17■□□□□ 0.82
MBD4-202ENST00000393278 GDF11O95390 407 aa20.17■□□□□ 0.82
MBD4-202ENST00000393278 ZNF445P59923 1031 aa20.17■□□□□ 0.82
MBD4-202ENST00000393278 TPRNQ4KMQ1 711 aa20.17■□□□□ 0.82
MBD4-202ENST00000393278 ANO1Q5XXA6 986 aa20.17■□□□□ 0.82
MBD4-202ENST00000393278 PIBF1Q8WXW3 757 aa20.17■□□□□ 0.82
MBD4-202ENST00000393278 MKL1Q969V6 931 aa20.17■□□□□ 0.82
MBD4-202ENST00000393278 SYT17Q9BSW7 474 aa20.17■□□□□ 0.82
MBD4-202ENST00000393278 PGAP2Q9UHJ9 254 aa20.17■□□□□ 0.82
MBD4-202ENST00000393278 DICER1Q9UPY3 1922 aaKnown RBP20.17■□□□□ 0.82
MBD4-202ENST00000393278 MYH4Q9Y623 1939 aa20.17■□□□□ 0.82
MBD4-202ENST00000393278 BAZ2BQ9UIF8 2168 aaKnown RBP20.16■□□□□ 0.82
MBD4-202ENST00000393278 TBC1D12O60347 775 aa20.16■□□□□ 0.82
MBD4-202ENST00000393278 VEGFAP15692 232 aaPredicted RBP20.16■□□□□ 0.82
MBD4-202ENST00000393278 DEKP35659 375 aaKnown RBP20.16■□□□□ 0.82
MBD4-202ENST00000393278 KRT2P35908 639 aa20.16■□□□□ 0.82
MBD4-202ENST00000393278 TNNI2P48788 182 aa20.16■□□□□ 0.82
MBD4-202ENST00000393278 NR5A1Q13285 461 aa20.16■□□□□ 0.82
MBD4-202ENST00000393278 RRP1BQ14684 758 aaKnown RBP20.16■□□□□ 0.82
MBD4-202ENST00000393278 SEPT2Q15019 361 aa20.16■□□□□ 0.82
MBD4-202ENST00000393278 NPY5RQ15761 445 aa20.16■□□□□ 0.82
MBD4-202ENST00000393278 RBM26Q5T8P6 1007 aaKnown RBP20.16■□□□□ 0.82
MBD4-202ENST00000393278 OXER1Q8TDS5 423 aa20.16■□□□□ 0.82
MBD4-202ENST00000393278 SH3GLB2Q9NR46 395 aa20.16■□□□□ 0.82
MBD4-202ENST00000393278 EEF2P13639 858 aaKnown RBP20.16■□□□□ 0.82
MBD4-202ENST00000393278 ATP2B2Q01814 1243 aa20.16■□□□□ 0.82
MBD4-202ENST00000393278 ICA1Q05084 483 aa20.16■□□□□ 0.82
MBD4-202ENST00000393278 KCNG4Q8TDN1 519 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms