RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 TRPM2O94759 1503 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 EFCAB14O75071 495 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 NT5C2P49902 561 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 RASSF2P50749 326 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 IRX5P78411 483 aaPredicted RBP4.39□□□□□ -1.71
UBR3-202ENST00000392632 TSTA3Q13630 321 aaPredicted RBP4.39□□□□□ -1.71
UBR3-202ENST00000392632 PSMD6Q15008 389 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 GKAP1Q5VSY0 366 aaPredicted RBP4.39□□□□□ -1.71
UBR3-202ENST00000392632 KHDRBS2Q5VWX1 349 aaKnown RBP4.39□□□□□ -1.71
UBR3-202ENST00000392632 RINT1Q6NUQ1 792 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 PNMA8AQ86V59 439 aaPredicted RBP4.39□□□□□ -1.71
UBR3-202ENST00000392632 SLFN12Q8IYM2 578 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 BBOF1Q8ND07 529 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 RSAD2Q8WXG1 361 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 APPBP2Q92624 585 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 MCUR1Q96AQ8 359 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 MMS19Q96T76 1030 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 KIF9Q9HAQ2 790 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 KCNH4Q9UQ05 1017 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 TESPA1A2RU30 521 aaPredicted RBP4.39□□□□□ -1.71
UBR3-202ENST00000392632 GPC4O75487 556 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 ADRA2BP18089 450 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 TERF1P54274 439 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 RAD51Q06609 339 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 SFSWAPQ12872 951 aaKnown RBP4.39□□□□□ -1.71
UBR3-202ENST00000392632 SLC39A6Q13433 755 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 E2F5Q15329 346 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 FAM98CQ17RN3 349 aaKnown RBP4.39□□□□□ -1.71
UBR3-202ENST00000392632 GALNT17Q6IS24 598 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 Q6ZUG5 572 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 HELBQ8NG08 1087 aaPredicted RBP4.39□□□□□ -1.71
UBR3-202ENST00000392632 GRK7Q8WTQ7 553 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 RNF139Q8WU17 664 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 SLC7A3Q8WY07 619 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 IP6K1Q92551 441 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 PIDD1Q9HB75 910 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 METTL14Q9HCE5 456 aaKnown RBP4.39□□□□□ -1.71
UBR3-202ENST00000392632 MAP3K15Q6ZN16 1313 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 A6NJR5 290 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 THAP12O43422 761 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 PCP11498 1178 aaKnown RBP4.38□□□□□ -1.71
UBR3-202ENST00000392632 PSMA3P25788 255 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 EPHB1P54762 984 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 PPFIA1Q13136 1202 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 MTMR3Q13615 1198 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 DBN1Q16643 649 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 NOP9Q86U38 636 aaKnown RBP4.38□□□□□ -1.71
UBR3-202ENST00000392632 TRIM42Q8IWZ5 723 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 DACT3Q96B18 629 aaPredicted RBP4.38□□□□□ -1.71
UBR3-202ENST00000392632 PGBD1Q96JS3 809 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 TEX12Q9BXU0 123 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 SLC7A5P2Q9GIP4 190 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 CLSTN2Q9H4D0 955 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 RAB20Q9NX57 234 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 SAP30BPQ9UHR5 308 aaKnown RBP4.38□□□□□ -1.71
UBR3-202ENST00000392632 MID2Q9UJV3 735 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 RTL1A6NKG5 1358 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 FAM95CA0A1B0GW59 222 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 IQCA1LA6NCM1 817 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 ARHGAP6O43182 974 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 STAM2O75886 525 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 ZNF853P0CG23 659 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 POLGP54098 1239 aaPredicted RBP4.38□□□□□ -1.71
UBR3-202ENST00000392632 HSPA2P54652 639 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 PRKCQQ04759 706 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 PPP2R3AQ06190 1150 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 CCDC15Q0P6D6 951 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 CCDC93Q567U6 631 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 XKR9Q5GH70 373 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 MFSD14BQ5SR56 506 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 ACBD5Q5T8D3 534 aaPredicted RBP4.38□□□□□ -1.71
UBR3-202ENST00000392632 JADE1Q6IE81 842 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 YAF2Q8IY57 180 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 CCDC170Q8IYT3 715 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 ATP6V1E2Q96A05 226 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 PRIMPOLQ96LW4 560 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 TEKT3Q9BXF9 490 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 BACH2Q9BYV9 841 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 SNX25Q9H3E2 840 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 MRPL44Q9H9J2 332 aaKnown RBP4.38□□□□□ -1.71
UBR3-202ENST00000392632 SRPRBQ9Y5M8 271 aaKnown RBP4.38□□□□□ -1.71
UBR3-202ENST00000392632 ELP1O95163 1332 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 SBNO2Q9Y2G9 1366 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 YEATS2Q9ULM3 1422 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 COPB2P35606 906 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 STAT1P42224 750 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 TXKP42681 527 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 LMNB2Q03252 620 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 DRP2Q13474 957 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 CALCRLQ16602 461 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 RC3H1Q5TC82 1133 aaKnown RBP4.38□□□□□ -1.71
UBR3-202ENST00000392632 LMNTD2Q8IXW0 634 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 CSGALNACT2Q8N6G5 542 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 ENOX1Q8TC92 643 aaKnown RBP4.38□□□□□ -1.71
UBR3-202ENST00000392632 MMTAG2Q9BU76 263 aaKnown RBP4.38□□□□□ -1.71
UBR3-202ENST00000392632 TSPYL2Q9H2G4 693 aaPredicted RBP4.38□□□□□ -1.71
UBR3-202ENST00000392632 SUGCTQ9HAC7 445 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 FBXO40Q9UH90 709 aa4.38□□□□□ -1.71
UBR3-202ENST00000392632 RPRD2Q5VT52 1461 aaKnown RBP4.38□□□□□ -1.71
UBR3-202ENST00000392632 ERICH4A6NGS2 130 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms