RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 LBX2Q6XYB7 198 aa14.08□□□□□ -0.15
RFC4-202ENST00000392481 ZNF589Q86UQ0 364 aaPredicted RBP14.08□□□□□ -0.15
RFC4-202ENST00000392481 RAET1EQ8TD07 263 aa14.08□□□□□ -0.15
RFC4-202ENST00000392481 COA7Q96BR5 231 aa14.08□□□□□ -0.15
RFC4-202ENST00000392481 TXNRD2Q9NNW7 524 aa14.08□□□□□ -0.15
RFC4-202ENST00000392481 DIAPH3Q9NSV4 1193 aa14.08□□□□□ -0.15
RFC4-202ENST00000392481 NYAP2Q9P242 653 aa14.08□□□□□ -0.15
RFC4-202ENST00000392481 ANAPC4Q9UJX5 808 aa14.08□□□□□ -0.15
RFC4-202ENST00000392481 RABGAP1Q9Y3P9 1069 aa14.08□□□□□ -0.15
RFC4-202ENST00000392481 FGAP02671 866 aa14.07□□□□□ -0.16
RFC4-202ENST00000392481 HSPD1P10809 573 aaKnown RBP14.07□□□□□ -0.16
RFC4-202ENST00000392481 ERVK-9P63128 1117 aa14.07□□□□□ -0.16
RFC4-202ENST00000392481 ERVK-24P63145 666 aa14.07□□□□□ -0.16
RFC4-202ENST00000392481 COG2Q14746 738 aa14.07□□□□□ -0.16
RFC4-202ENST00000392481 KIAA1755Q5JYT7 1200 aa14.07□□□□□ -0.16
RFC4-202ENST00000392481 POTEEQ6S8J3 1075 aa14.07□□□□□ -0.16
RFC4-202ENST00000392481 ZNF333Q96JL9 665 aa14.07□□□□□ -0.16
RFC4-202ENST00000392481 GOPCQ9HD26 462 aa14.07□□□□□ -0.16
RFC4-202ENST00000392481 HOXC10Q9NYD6 342 aa14.07□□□□□ -0.16
RFC4-202ENST00000392481 ZMYM6O95789 1325 aa14.07□□□□□ -0.16
RFC4-202ENST00000392481 IGKV6D-41A0A0C4DH26 115 aa14.07□□□□□ -0.16
RFC4-202ENST00000392481 WDR46O15213 610 aaKnown RBP14.07□□□□□ -0.16
RFC4-202ENST00000392481 FLT3LGP49771 235 aa14.07□□□□□ -0.16
RFC4-202ENST00000392481 IRF5Q13568 498 aa14.07□□□□□ -0.16
RFC4-202ENST00000392481 CWC27Q6UX04 472 aaKnown RBP14.07□□□□□ -0.16
RFC4-202ENST00000392481 SPICE1Q8N0Z3 855 aa14.07□□□□□ -0.16
RFC4-202ENST00000392481 NEDD1Q8NHV4 660 aa14.07□□□□□ -0.16
RFC4-202ENST00000392481 PAGR1Q9BTK6 254 aa14.07□□□□□ -0.16
RFC4-202ENST00000392481 TANGO6Q9C0B7 1094 aa14.07□□□□□ -0.16
RFC4-202ENST00000392481 GABRQQ9UN88 632 aa14.07□□□□□ -0.16
RFC4-202ENST00000392481 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.07□□□□□ -0.16
RFC4-202ENST00000392481 PLIN4Q96Q06 1357 aa14.06□□□□□ -0.16
RFC4-202ENST00000392481 SPDYE16A6NNV3 312 aaPredicted RBP14.06□□□□□ -0.16
RFC4-202ENST00000392481 PEX10O60683 326 aa14.06□□□□□ -0.16
RFC4-202ENST00000392481 TSPY3P0CV98 308 aa14.06□□□□□ -0.16
RFC4-202ENST00000392481 TSPY8P0CW00 308 aa14.06□□□□□ -0.16
RFC4-202ENST00000392481 GSPT1P15170 499 aaKnown RBP14.06□□□□□ -0.16
RFC4-202ENST00000392481 MAPK4P31152 587 aa14.06□□□□□ -0.16
RFC4-202ENST00000392481 GRK4P32298 578 aa14.06□□□□□ -0.16
RFC4-202ENST00000392481 CCNA1P78396 465 aa14.06□□□□□ -0.16
RFC4-202ENST00000392481 CTDSPL2Q05D32 466 aa14.06□□□□□ -0.16
RFC4-202ENST00000392481 Q3C1V9 767 aa14.06□□□□□ -0.16
RFC4-202ENST00000392481 SH3TC2Q8TF17 1288 aa14.06□□□□□ -0.16
RFC4-202ENST00000392481 MTMR4Q9NYA4 1195 aa14.06□□□□□ -0.16
RFC4-202ENST00000392481 PDE4DIPQ5VU43 2346 aa14.05□□□□□ -0.16
RFC4-202ENST00000392481 CNMDO75829 334 aa14.05□□□□□ -0.16
RFC4-202ENST00000392481 FGRP09769 529 aa14.05□□□□□ -0.16
RFC4-202ENST00000392481 TFAP4Q01664 338 aa14.05□□□□□ -0.16
RFC4-202ENST00000392481 CCAR1Q8IX12 1150 aaKnown RBP14.05□□□□□ -0.16
RFC4-202ENST00000392481 SLAIN1Q8ND83 568 aa14.05□□□□□ -0.16
RFC4-202ENST00000392481 PXYLP1Q8TE99 480 aa14.05□□□□□ -0.16
RFC4-202ENST00000392481 MKL1Q969V6 931 aa14.05□□□□□ -0.16
RFC4-202ENST00000392481 CEP95Q96GE4 821 aa14.05□□□□□ -0.16
RFC4-202ENST00000392481 CLIP2Q9UDT6 1046 aa14.05□□□□□ -0.16
RFC4-202ENST00000392481 GJD2Q9UKL4 321 aa14.05□□□□□ -0.16
RFC4-202ENST00000392481 SYNPO2Q9UMS6 1093 aa14.05□□□□□ -0.16
RFC4-202ENST00000392481 RLFQ13129 1914 aa14.05□□□□□ -0.16
RFC4-202ENST00000392481 ORC4O43929 436 aa14.04□□□□□ -0.16
RFC4-202ENST00000392481 ADCY3O60266 1144 aa14.04□□□□□ -0.16
RFC4-202ENST00000392481 FLOT1O75955 427 aa14.04□□□□□ -0.16
RFC4-202ENST00000392481 TTLL1O95922 423 aa14.04□□□□□ -0.16
RFC4-202ENST00000392481 DSG3P32926 999 aa14.04□□□□□ -0.16
RFC4-202ENST00000392481 FAM47AQ5JRC9 791 aa14.04□□□□□ -0.16
RFC4-202ENST00000392481 PPP4R3BQ5MIZ7 849 aa14.04□□□□□ -0.16
RFC4-202ENST00000392481 CENPQQ7L2Z9 268 aaPredicted RBP14.04□□□□□ -0.16
RFC4-202ENST00000392481 MB21D1Q8N884 522 aa14.04□□□□□ -0.16
RFC4-202ENST00000392481 TMEM106CQ9BVX2 250 aa14.04□□□□□ -0.16
RFC4-202ENST00000392481 PORCNQ9H237 461 aa14.04□□□□□ -0.16
RFC4-202ENST00000392481 BTBD7Q9P203 1132 aa14.04□□□□□ -0.16
RFC4-202ENST00000392481 MYH4Q9Y623 1939 aa14.03□□□□□ -0.16
RFC4-202ENST00000392481 TNRC18O15417 2968 aaPredicted RBP14.03□□□□□ -0.16
RFC4-202ENST00000392481 F5H6K3 240 aa14.03□□□□□ -0.16
RFC4-202ENST00000392481 RAD21O60216 631 aa14.03□□□□□ -0.16
RFC4-202ENST00000392481 MLLT1Q03111 559 aaPredicted RBP14.03□□□□□ -0.16
RFC4-202ENST00000392481 KLRC3Q07444 240 aa14.03□□□□□ -0.16
RFC4-202ENST00000392481 INCENPQ9NQS7 918 aa14.03□□□□□ -0.16
RFC4-202ENST00000392481 BIN2Q9UBW5 565 aaPredicted RBP14.03□□□□□ -0.16
RFC4-202ENST00000392481 TACC3Q9Y6A5 838 aa14.03□□□□□ -0.16
RFC4-202ENST00000392481 BRCA2P51587 3418 aa14.03□□□□□ -0.16
RFC4-202ENST00000392481 RBBP6Q7Z6E9 1792 aaKnown RBP14.02□□□□□ -0.16
RFC4-202ENST00000392481 TSPY2A6NKD2 308 aa14.02□□□□□ -0.16
RFC4-202ENST00000392481 RANBP6O60518 1105 aaKnown RBP14.02□□□□□ -0.16
RFC4-202ENST00000392481 NDUFB10O96000 172 aa14.02□□□□□ -0.16
RFC4-202ENST00000392481 PCP11498 1178 aaKnown RBP14.02□□□□□ -0.16
RFC4-202ENST00000392481 ELNP15502 786 aa14.02□□□□□ -0.16
RFC4-202ENST00000392481 UBXN2AP68543 259 aa14.02□□□□□ -0.16
RFC4-202ENST00000392481 FAM83BQ5T0W9 1011 aa14.02□□□□□ -0.16
RFC4-202ENST00000392481 GPR142Q7Z601 462 aa14.02□□□□□ -0.16
RFC4-202ENST00000392481 PLEKHH3Q7Z736 793 aa14.02□□□□□ -0.16
RFC4-202ENST00000392481 SOCS4Q8WXH5 440 aa14.02□□□□□ -0.16
RFC4-202ENST00000392481 NUDT12Q9BQG2 462 aa14.02□□□□□ -0.16
RFC4-202ENST00000392481 DSCC1Q9BVC3 393 aa14.02□□□□□ -0.16
RFC4-202ENST00000392481 ADAMTS5Q9UNA0 930 aa14.02□□□□□ -0.16
RFC4-202ENST00000392481 PARP14Q460N5 1801 aa14.01□□□□□ -0.17
RFC4-202ENST00000392481 POTEFA5A3E0 1075 aa14.01□□□□□ -0.17
RFC4-202ENST00000392481 XRCC5P13010 732 aaKnown RBP14.01□□□□□ -0.17
RFC4-202ENST00000392481 HAND2P61296 217 aa14.01□□□□□ -0.17
RFC4-202ENST00000392481 AKNAD1Q5T1N1 836 aa14.01□□□□□ -0.17
RFC4-202ENST00000392481 GMCL1P1Q8NEA9 526 aa14.01□□□□□ -0.17
RFC4-202ENST00000392481 RUFY2Q8WXA3 655 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms