RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 NBPF3Q9H094 633 aa12.9□□□□□ -0.34
TRAV4-201ENST00000390426 OGDHLQ9ULD0 1010 aa12.9□□□□□ -0.34
TRAV4-201ENST00000390426 SLC4A4Q9Y6R1 1079 aa12.9□□□□□ -0.34
TRAV4-201ENST00000390426 NAV1Q8NEY1 1877 aa12.9□□□□□ -0.34
TRAV4-201ENST00000390426 DDX60LQ5H9U9 1706 aaKnown RBP12.9□□□□□ -0.34
TRAV4-201ENST00000390426 SLC15A5A6NIM6 579 aa12.89□□□□□ -0.35
TRAV4-201ENST00000390426 HOXD11P31277 338 aaPredicted RBP12.89□□□□□ -0.35
TRAV4-201ENST00000390426 CDK8P49336 464 aa12.89□□□□□ -0.35
TRAV4-201ENST00000390426 COG2Q14746 738 aa12.89□□□□□ -0.35
TRAV4-201ENST00000390426 C12orf60Q5U649 245 aa12.89□□□□□ -0.35
TRAV4-201ENST00000390426 SIAH1Q8IUQ4 282 aa12.89□□□□□ -0.35
TRAV4-201ENST00000390426 C7orf61Q8IZ16 206 aa12.89□□□□□ -0.35
TRAV4-201ENST00000390426 PUS7LQ9H0K6 701 aaKnown RBP12.89□□□□□ -0.35
TRAV4-201ENST00000390426 PRO3102Q9H379 93 aa12.89□□□□□ -0.35
TRAV4-201ENST00000390426 C11orf49Q9H6J7 331 aa12.89□□□□□ -0.35
TRAV4-201ENST00000390426 HOXC10Q9NYD6 342 aa12.89□□□□□ -0.35
TRAV4-201ENST00000390426 FLRT1Q9NZU1 646 aa12.89□□□□□ -0.35
TRAV4-201ENST00000390426 STAP2Q9UGK3 403 aa12.89□□□□□ -0.35
TRAV4-201ENST00000390426 ZMYND8Q9ULU4 1186 aaPredicted RBP12.89□□□□□ -0.35
TRAV4-201ENST00000390426 IVNS1ABPQ9Y6Y0 642 aa12.89□□□□□ -0.35
TRAV4-201ENST00000390426 ICA1Q05084 483 aa12.88□□□□□ -0.35
TRAV4-201ENST00000390426 MFSD14CQ5VZR4 134 aa12.88□□□□□ -0.35
TRAV4-201ENST00000390426 LHX8Q68G74 356 aa12.88□□□□□ -0.35
TRAV4-201ENST00000390426 ZSCAN25Q6NSZ9 544 aa12.88□□□□□ -0.35
TRAV4-201ENST00000390426 CTR9Q6PD62 1173 aa12.88□□□□□ -0.35
TRAV4-201ENST00000390426 SAMD1Q6SPF0 538 aaPredicted RBP12.88□□□□□ -0.35
TRAV4-201ENST00000390426 AMOTL1Q8IY63 956 aa12.88□□□□□ -0.35
TRAV4-201ENST00000390426 SPICE1Q8N0Z3 855 aa12.88□□□□□ -0.35
TRAV4-201ENST00000390426 NPLOC4Q8TAT6 608 aa12.88□□□□□ -0.35
TRAV4-201ENST00000390426 DDRGK1Q96HY6 314 aa12.88□□□□□ -0.35
TRAV4-201ENST00000390426 CCDC17Q96LX7 622 aa12.88□□□□□ -0.35
TRAV4-201ENST00000390426 MOV10L1Q9BXT6 1211 aaKnown RBP12.88□□□□□ -0.35
TRAV4-201ENST00000390426 ARHGEF10LQ9HCE6 1279 aa12.88□□□□□ -0.35
TRAV4-201ENST00000390426 ECHDC1Q9NTX5 307 aa12.88□□□□□ -0.35
TRAV4-201ENST00000390426 RNF216Q9NWF9 866 aaPredicted RBP12.88□□□□□ -0.35
TRAV4-201ENST00000390426 TMX2Q9Y320 296 aa12.88□□□□□ -0.35
TRAV4-201ENST00000390426 DSG3P32926 999 aa12.87□□□□□ -0.35
TRAV4-201ENST00000390426 ATP2B2Q01814 1243 aa12.87□□□□□ -0.35
TRAV4-201ENST00000390426 GRB14Q14449 540 aa12.87□□□□□ -0.35
TRAV4-201ENST00000390426 TSHZ3Q63HK5 1081 aa12.87□□□□□ -0.35
TRAV4-201ENST00000390426 C16orf86Q6ZW13 317 aa12.87□□□□□ -0.35
TRAV4-201ENST00000390426 DCTPP1Q9H773 170 aa12.87□□□□□ -0.35
TRAV4-201ENST00000390426 VCPKMTQ9H867 229 aa12.87□□□□□ -0.35
TRAV4-201ENST00000390426 FLOT1O75955 427 aa12.86□□□□□ -0.35
TRAV4-201ENST00000390426 SYN1P17600 705 aa12.86□□□□□ -0.35
TRAV4-201ENST00000390426 CNGA1P29973 690 aa12.86□□□□□ -0.35
TRAV4-201ENST00000390426 CYP2C19P33261 490 aa12.86□□□□□ -0.35
TRAV4-201ENST00000390426 PLS1Q14651 629 aa12.86□□□□□ -0.35
TRAV4-201ENST00000390426 STK11IPQ8N1F8 1099 aa12.86□□□□□ -0.35
TRAV4-201ENST00000390426 LPAR1Q92633 364 aa12.86□□□□□ -0.35
TRAV4-201ENST00000390426 ATG4CQ96DT6 458 aa12.86□□□□□ -0.35
TRAV4-201ENST00000390426 STRBPQ96SI9 672 aaKnown RBP12.86□□□□□ -0.35
TRAV4-201ENST00000390426 SPATC1LQ9H0A9 340 aa12.86□□□□□ -0.35
TRAV4-201ENST00000390426 SH2D4AQ9H788 454 aa12.86□□□□□ -0.35
TRAV4-201ENST00000390426 PFASO15067 1338 aa12.86□□□□□ -0.35
TRAV4-201ENST00000390426 RAD21O60216 631 aa12.85□□□□□ -0.35
TRAV4-201ENST00000390426 HOXC6P09630 235 aa12.85□□□□□ -0.35
TRAV4-201ENST00000390426 EEF2P13639 858 aaKnown RBP12.85□□□□□ -0.35
TRAV4-201ENST00000390426 ERCC3P19447 782 aa12.85□□□□□ -0.35
TRAV4-201ENST00000390426 ADORA2AP29274 412 aa12.85□□□□□ -0.35
TRAV4-201ENST00000390426 DPP9Q86TI2 863 aa12.85□□□□□ -0.35
TRAV4-201ENST00000390426 NCAPG2Q86XI2 1143 aa12.85□□□□□ -0.35
TRAV4-201ENST00000390426 KBTBD3Q8NAB2 608 aa12.85□□□□□ -0.35
TRAV4-201ENST00000390426 OSBP2Q969R2 916 aa12.85□□□□□ -0.35
TRAV4-201ENST00000390426 GPATCH3Q96I76 525 aa12.85□□□□□ -0.35
TRAV4-201ENST00000390426 ALPK3Q96L96 1907 aa12.84□□□□□ -0.35
TRAV4-201ENST00000390426 BAZ2AQ9UIF9 1905 aaKnown RBP12.84□□□□□ -0.35
TRAV4-201ENST00000390426 GSG1L2A8MUP6 293 aa12.84□□□□□ -0.35
TRAV4-201ENST00000390426 WDR46O15213 610 aaKnown RBP12.84□□□□□ -0.35
TRAV4-201ENST00000390426 STRNO43815 780 aa12.84□□□□□ -0.35
TRAV4-201ENST00000390426 COBLO75128 1261 aa12.84□□□□□ -0.35
TRAV4-201ENST00000390426 COL6A1P12109 1028 aa12.84□□□□□ -0.35
TRAV4-201ENST00000390426 MB21D1Q8N884 522 aa12.84□□□□□ -0.35
TRAV4-201ENST00000390426 SHCBP1Q8NEM2 672 aa12.84□□□□□ -0.35
TRAV4-201ENST00000390426 TRPV1Q8NER1 839 aa12.84□□□□□ -0.35
TRAV4-201ENST00000390426 KANSL2Q9H9L4 492 aa12.84□□□□□ -0.35
TRAV4-201ENST00000390426 FBXO28Q9NVF7 368 aa12.84□□□□□ -0.35
TRAV4-201ENST00000390426 ARPP21Q9UBL0 812 aaPredicted RBP12.84□□□□□ -0.35
TRAV4-201ENST00000390426 DDX20Q9UHI6 824 aaKnown RBP12.84□□□□□ -0.35
TRAV4-201ENST00000390426 MINDY4BA8MYZ0 360 aa12.83□□□□□ -0.36
TRAV4-201ENST00000390426 RNF113AO15541 343 aaKnown RBP12.83□□□□□ -0.36
TRAV4-201ENST00000390426 TMEM132BQ14DG7 1078 aa12.83□□□□□ -0.36
TRAV4-201ENST00000390426 LRRC26Q2I0M4 334 aa12.83□□□□□ -0.36
TRAV4-201ENST00000390426 SBK1Q52WX2 424 aa12.83□□□□□ -0.36
TRAV4-201ENST00000390426 APPBP2Q92624 585 aa12.83□□□□□ -0.36
TRAV4-201ENST00000390426 GDF15Q99988 308 aa12.83□□□□□ -0.36
TRAV4-201ENST00000390426 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.83□□□□□ -0.36
TRAV4-201ENST00000390426 MROH8Q9H579 483 aa12.83□□□□□ -0.36
TRAV4-201ENST00000390426 PCDHB15Q9Y5E8 787 aa12.83□□□□□ -0.36
TRAV4-201ENST00000390426 A0A1W2PPC1 479 aa12.82□□□□□ -0.36
TRAV4-201ENST00000390426 SOX1O00570 391 aaPredicted RBP12.82□□□□□ -0.36
TRAV4-201ENST00000390426 IGHA2P01877 340 aa12.82□□□□□ -0.36
TRAV4-201ENST00000390426 RASA1P20936 1047 aa12.82□□□□□ -0.36
TRAV4-201ENST00000390426 PRAMEF19Q5SWL8 479 aa12.82□□□□□ -0.36
TRAV4-201ENST00000390426 FAM83BQ5T0W9 1011 aa12.82□□□□□ -0.36
TRAV4-201ENST00000390426 ANO1Q5XXA6 986 aa12.82□□□□□ -0.36
TRAV4-201ENST00000390426 OLFML2BQ68BL8 750 aa12.82□□□□□ -0.36
TRAV4-201ENST00000390426 SENP6Q9GZR1 1112 aaPredicted RBP12.82□□□□□ -0.36
TRAV4-201ENST00000390426 MKNK2Q9HBH9 465 aa12.82□□□□□ -0.36
TRAV4-201ENST00000390426 GOPCQ9HD26 462 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms