RNA–Protein interactions for RNA: ENST00000390399.3

TRBV27-201, Transcript of T cell receptor beta variable 27, humanhuman

APPRIS P1 BASIC

Gene TRBV27, Length 387 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27-201ENST00000390399 SPDYE16A6NNV3 312 aaPredicted RBP10.66□□□□□ -0.7
TRBV27-201ENST00000390399 EEF2P13639 858 aaKnown RBP10.66□□□□□ -0.7
TRBV27-201ENST00000390399 PDE4BQ07343 736 aa10.66□□□□□ -0.7
TRBV27-201ENST00000390399 NMIQ13287 307 aaPredicted RBP10.66□□□□□ -0.7
TRBV27-201ENST00000390399 KIAA1755Q5JYT7 1200 aa10.66□□□□□ -0.7
TRBV27-201ENST00000390399 VPS53Q5VIR6 699 aa10.66□□□□□ -0.7
TRBV27-201ENST00000390399 ZNF444Q8N0Y2 327 aaPredicted RBP10.66□□□□□ -0.7
TRBV27-201ENST00000390399 SPICE1Q8N0Z3 855 aa10.66□□□□□ -0.7
TRBV27-201ENST00000390399 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.66□□□□□ -0.7
TRBV27-201ENST00000390399 TMEM106CQ9BVX2 250 aa10.66□□□□□ -0.7
TRBV27-201ENST00000390399 VCPKMTQ9H867 229 aa10.66□□□□□ -0.7
TRBV27-201ENST00000390399 BIN2Q9UBW5 565 aaPredicted RBP10.66□□□□□ -0.7
TRBV27-201ENST00000390399 RABGAP1Q9Y3P9 1069 aa10.66□□□□□ -0.7
TRBV27-201ENST00000390399 CENPFP49454 3210 aa10.66□□□□□ -0.7
TRBV27-201ENST00000390399 A0A0G2JMZ2 1700 aa10.66□□□□□ -0.7
TRBV27-201ENST00000390399 CCDC171Q6TFL3 1326 aa10.65□□□□□ -0.7
TRBV27-201ENST00000390399 WDR46O15213 610 aaKnown RBP10.65□□□□□ -0.7
TRBV27-201ENST00000390399 RAD21O60216 631 aa10.65□□□□□ -0.7
TRBV27-201ENST00000390399 ADCY3O60266 1144 aa10.65□□□□□ -0.7
TRBV27-201ENST00000390399 CNMDO75829 334 aa10.65□□□□□ -0.7
TRBV27-201ENST00000390399 SDSP20132 328 aa10.65□□□□□ -0.7
TRBV27-201ENST00000390399 PDE4AP27815 886 aa10.65□□□□□ -0.7
TRBV27-201ENST00000390399 MAPK4P31152 587 aa10.65□□□□□ -0.7
TRBV27-201ENST00000390399 UBXN2AP68543 259 aa10.65□□□□□ -0.7
TRBV27-201ENST00000390399 CCNA1P78396 465 aa10.65□□□□□ -0.7
TRBV27-201ENST00000390399 IRF5Q13568 498 aa10.65□□□□□ -0.7
TRBV27-201ENST00000390399 Q3C1V9 767 aa10.65□□□□□ -0.7
TRBV27-201ENST00000390399 POTEEQ6S8J3 1075 aa10.65□□□□□ -0.7
TRBV27-201ENST00000390399 LBX2Q6XYB7 198 aa10.65□□□□□ -0.7
TRBV27-201ENST00000390399 ZNF589Q86UQ0 364 aaPredicted RBP10.65□□□□□ -0.7
TRBV27-201ENST00000390399 CCAR1Q8IX12 1150 aaKnown RBP10.65□□□□□ -0.7
TRBV27-201ENST00000390399 CWC22Q9HCG8 908 aaKnown RBP10.65□□□□□ -0.7
TRBV27-201ENST00000390399 GOPCQ9HD26 462 aa10.65□□□□□ -0.7
TRBV27-201ENST00000390399 DIAPH3Q9NSV4 1193 aa10.65□□□□□ -0.7
TRBV27-201ENST00000390399 PLIN4Q96Q06 1357 aa10.65□□□□□ -0.71
TRBV27-201ENST00000390399 HIP1O00291 1037 aa10.64□□□□□ -0.71
TRBV27-201ENST00000390399 FLOT1O75955 427 aa10.64□□□□□ -0.71
TRBV27-201ENST00000390399 TSPY3P0CV98 308 aa10.64□□□□□ -0.71
TRBV27-201ENST00000390399 TSPY8P0CW00 308 aa10.64□□□□□ -0.71
TRBV27-201ENST00000390399 ELNP15502 786 aa10.64□□□□□ -0.71
TRBV27-201ENST00000390399 MFAP1P55081 439 aaKnown RBP10.64□□□□□ -0.71
TRBV27-201ENST00000390399 CTDSPL2Q05D32 466 aa10.64□□□□□ -0.71
TRBV27-201ENST00000390399 COG2Q14746 738 aa10.64□□□□□ -0.71
TRBV27-201ENST00000390399 PXYLP1Q8TE99 480 aa10.64□□□□□ -0.71
TRBV27-201ENST00000390399 SOCS4Q8WXH5 440 aa10.64□□□□□ -0.71
TRBV27-201ENST00000390399 PORCNQ9H237 461 aa10.64□□□□□ -0.71
TRBV27-201ENST00000390399 HOXC10Q9NYD6 342 aa10.64□□□□□ -0.71
TRBV27-201ENST00000390399 BTBD7Q9P203 1132 aa10.64□□□□□ -0.71
TRBV27-201ENST00000390399 NYAP2Q9P242 653 aa10.64□□□□□ -0.71
TRBV27-201ENST00000390399 PLXNB2O15031 1838 aa10.63□□□□□ -0.71
TRBV27-201ENST00000390399 ZMYM6O95789 1325 aa10.63□□□□□ -0.71
TRBV27-201ENST00000390399 RLFQ13129 1914 aa10.63□□□□□ -0.71
TRBV27-201ENST00000390399 IGKV6D-41A0A0C4DH26 115 aa10.63□□□□□ -0.71
TRBV27-201ENST00000390399 INHAP05111 366 aa10.63□□□□□ -0.71
TRBV27-201ENST00000390399 HSPD1P10809 573 aaKnown RBP10.63□□□□□ -0.71
TRBV27-201ENST00000390399 CCL5P13501 91 aa10.63□□□□□ -0.71
TRBV27-201ENST00000390399 EN2P19622 333 aaPredicted RBP10.63□□□□□ -0.71
TRBV27-201ENST00000390399 TFAP4Q01664 338 aa10.63□□□□□ -0.71
TRBV27-201ENST00000390399 MTFR1Q15390 333 aa10.63□□□□□ -0.71
TRBV27-201ENST00000390399 ALX1Q15699 326 aa10.63□□□□□ -0.71
TRBV27-201ENST00000390399 FAM47AQ5JRC9 791 aa10.63□□□□□ -0.71
TRBV27-201ENST00000390399 TTC22Q5TAA0 569 aa10.63□□□□□ -0.71
TRBV27-201ENST00000390399 WDR78Q5VTH9 848 aa10.63□□□□□ -0.71
TRBV27-201ENST00000390399 SAMD1Q6SPF0 538 aaPredicted RBP10.63□□□□□ -0.71
TRBV27-201ENST00000390399 CWC27Q6UX04 472 aaKnown RBP10.63□□□□□ -0.71
TRBV27-201ENST00000390399 GPR142Q7Z601 462 aa10.63□□□□□ -0.71
TRBV27-201ENST00000390399 PLEKHH3Q7Z736 793 aa10.63□□□□□ -0.71
TRBV27-201ENST00000390399 NEDD1Q8NHV4 660 aa10.63□□□□□ -0.71
TRBV27-201ENST00000390399 CEP95Q96GE4 821 aa10.63□□□□□ -0.71
TRBV27-201ENST00000390399 NUDT12Q9BQG2 462 aa10.63□□□□□ -0.71
TRBV27-201ENST00000390399 CLIP2Q9UDT6 1046 aa10.63□□□□□ -0.71
TRBV27-201ENST00000390399 ANAPC4Q9UJX5 808 aa10.63□□□□□ -0.71
TRBV27-201ENST00000390399 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.63□□□□□ -0.71
TRBV27-201ENST00000390399 PARP14Q460N5 1801 aa10.63□□□□□ -0.71
TRBV27-201ENST00000390399 MYH4Q9Y623 1939 aa10.62□□□□□ -0.71
TRBV27-201ENST00000390399 TSPY2A6NKD2 308 aa10.62□□□□□ -0.71
TRBV27-201ENST00000390399 TTLL1O95922 423 aa10.62□□□□□ -0.71
TRBV27-201ENST00000390399 FGAP02671 866 aa10.62□□□□□ -0.71
TRBV27-201ENST00000390399 GSPT1P15170 499 aaKnown RBP10.62□□□□□ -0.71
TRBV27-201ENST00000390399 CYP2B6P20813 491 aa10.62□□□□□ -0.71
TRBV27-201ENST00000390399 DSG3P32926 999 aa10.62□□□□□ -0.71
TRBV27-201ENST00000390399 FAM83BQ5T0W9 1011 aa10.62□□□□□ -0.71
TRBV27-201ENST00000390399 LRRC47Q8N1G4 583 aaKnown RBP10.62□□□□□ -0.71
TRBV27-201ENST00000390399 MB21D1Q8N884 522 aa10.62□□□□□ -0.71
TRBV27-201ENST00000390399 ATG4CQ96DT6 458 aa10.62□□□□□ -0.71
TRBV27-201ENST00000390399 RNF208Q9H0X6 261 aa10.62□□□□□ -0.71
TRBV27-201ENST00000390399 MTMR4Q9NYA4 1195 aa10.62□□□□□ -0.71
TRBV27-201ENST00000390399 GJD2Q9UKL4 321 aa10.62□□□□□ -0.71
TRBV27-201ENST00000390399 F5H6K3 240 aa10.61□□□□□ -0.71
TRBV27-201ENST00000390399 NDUFB10O96000 172 aa10.61□□□□□ -0.71
TRBV27-201ENST00000390399 HMGCRP04035 888 aa10.61□□□□□ -0.71
TRBV27-201ENST00000390399 RGS2P41220 211 aa10.61□□□□□ -0.71
TRBV27-201ENST00000390399 HAND2P61296 217 aa10.61□□□□□ -0.71
TRBV27-201ENST00000390399 KLRC3Q07444 240 aa10.61□□□□□ -0.71
TRBV27-201ENST00000390399 PPP4R3BQ5MIZ7 849 aa10.61□□□□□ -0.71
TRBV27-201ENST00000390399 MORN1Q5T089 497 aa10.61□□□□□ -0.71
TRBV27-201ENST00000390399 NUP88Q99567 741 aaPredicted RBP10.61□□□□□ -0.71
TRBV27-201ENST00000390399 APBA2Q99767 749 aa10.61□□□□□ -0.71
TRBV27-201ENST00000390399 MOV10L1Q9BXT6 1211 aaKnown RBP10.61□□□□□ -0.71
TRBV27-201ENST00000390399 SPATC1LQ9H0A9 340 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms