RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 HSCBQ8IWL3 235 aa6.86□□□□□ -1.31
ERCC4-202ENST00000389138 NIM1KQ8IY84 436 aa6.86□□□□□ -1.31
ERCC4-202ENST00000389138 SHDQ96IW2 340 aa6.86□□□□□ -1.31
ERCC4-202ENST00000389138 CSRNP1Q96S65 589 aa6.86□□□□□ -1.31
ERCC4-202ENST00000389138 STRBPQ96SI9 672 aaKnown RBP6.86□□□□□ -1.31
ERCC4-202ENST00000389138 RHOBTB2Q9BYZ6 727 aa6.86□□□□□ -1.31
ERCC4-202ENST00000389138 RIC8AQ9NPQ8 531 aa6.86□□□□□ -1.31
ERCC4-202ENST00000389138 PFDN2Q9UHV9 154 aa6.86□□□□□ -1.31
ERCC4-202ENST00000389138 POLIQ9UNA4 740 aa6.86□□□□□ -1.31
ERCC4-202ENST00000389138 DOLKQ9UPQ8 538 aa6.86□□□□□ -1.31
ERCC4-202ENST00000389138 THSD7AQ9UPZ6 1657 aa6.86□□□□□ -1.31
ERCC4-202ENST00000389138 METP08581 1390 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 ANKRD30BQ9BXX2 1392 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 EIF1AYO14602 144 aaKnown RBP6.85□□□□□ -1.31
ERCC4-202ENST00000389138 APAF1O14727 1248 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 EYA4O95677 639 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 TIMP2P16035 220 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 C1QTNF8P60827 252 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 TCIRG1Q13488 830 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 CNGB1Q14028 1251 aaPredicted RBP6.85□□□□□ -1.31
ERCC4-202ENST00000389138 TAF11Q15544 211 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 GFOD2Q3B7J2 385 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 NBPF8Q3BBV2 869 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 GLIPR1L2Q4G1C9 344 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 SPECC1Q5M775 1068 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 LARP1BQ659C4 914 aaKnown RBP6.85□□□□□ -1.31
ERCC4-202ENST00000389138 ALKBH2Q6NS38 261 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 C16orf46Q6P387 395 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 PGBD4Q96DM1 585 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 MFSD3Q96ES6 412 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 ORAI2Q96SN7 254 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 HERPUD2Q9BSE4 406 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 TRIM8Q9BZR9 551 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 GTF2IRD1Q9UHL9 959 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 MAPK8IP1Q9UQF2 711 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 PCDHGB3Q9Y5G1 929 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 MORC2Q9Y6X9 1032 aaPredicted RBP6.85□□□□□ -1.31
ERCC4-202ENST00000389138 KIF1AQ12756 1690 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 ANKRD30AQ9BXX3 1397 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 CAPN5O15484 640 aaPredicted RBP6.85□□□□□ -1.31
ERCC4-202ENST00000389138 TRIM37O94972 964 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 MYCP01106 439 aaPredicted RBP6.85□□□□□ -1.31
ERCC4-202ENST00000389138 PICALMQ13492 652 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 PUM3Q15397 648 aaKnown RBP6.85□□□□□ -1.31
ERCC4-202ENST00000389138 COX20Q5RI15 118 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 RASSF3Q86WH2 238 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 NINJ1Q92982 152 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 CNNM2Q9H8M5 875 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 CD248Q9HCU0 757 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 STIM2Q9P246 746 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 ZNF180Q9UJW8 692 aa6.85□□□□□ -1.31
ERCC4-202ENST00000389138 R3HCC1Q9Y3T6 440 aaKnown RBP6.85□□□□□ -1.31
ERCC4-202ENST00000389138 CASZ1Q86V15 1759 aa6.84□□□□□ -1.31
ERCC4-202ENST00000389138 KDM2BQ8NHM5 1336 aa6.84□□□□□ -1.31
ERCC4-202ENST00000389138 MYOM1P52179 1685 aa6.84□□□□□ -1.31
ERCC4-202ENST00000389138 AXIN1O15169 862 aa6.84□□□□□ -1.31
ERCC4-202ENST00000389138 NBPF7P0C2Y1 421 aaPredicted RBP6.84□□□□□ -1.31
ERCC4-202ENST00000389138 USP4Q13107 963 aa6.84□□□□□ -1.31
ERCC4-202ENST00000389138 CCDC81Q6ZN84 652 aa6.84□□□□□ -1.31
ERCC4-202ENST00000389138 MMS22LQ6ZRQ5 1243 aa6.84□□□□□ -1.31
ERCC4-202ENST00000389138 AGBL1Q96MI9 1066 aa6.84□□□□□ -1.31
ERCC4-202ENST00000389138 YIPF4Q9BSR8 244 aa6.84□□□□□ -1.31
ERCC4-202ENST00000389138 PLCB1Q9NQ66 1216 aa6.84□□□□□ -1.31
ERCC4-202ENST00000389138 STRIP2Q9ULQ0 834 aa6.84□□□□□ -1.31
ERCC4-202ENST00000389138 HCN4Q9Y3Q4 1203 aa6.84□□□□□ -1.31
ERCC4-202ENST00000389138 ANKRD50Q9ULJ7 1429 aa6.84□□□□□ -1.31
ERCC4-202ENST00000389138 DGKGP49619 791 aa6.83□□□□□ -1.32
ERCC4-202ENST00000389138 ERVK-9P63128 1117 aa6.83□□□□□ -1.32
ERCC4-202ENST00000389138 NUCB1Q02818 461 aa6.83□□□□□ -1.32
ERCC4-202ENST00000389138 SEPT2Q15019 361 aa6.83□□□□□ -1.32
ERCC4-202ENST00000389138 MTERF2Q49AM1 385 aa6.83□□□□□ -1.32
ERCC4-202ENST00000389138 Q6ZNB5 142 aa6.83□□□□□ -1.32
ERCC4-202ENST00000389138 NRKQ7Z2Y5 1582 aa6.83□□□□□ -1.32
ERCC4-202ENST00000389138 MAATS1Q7Z4T9 603 aa6.83□□□□□ -1.32
ERCC4-202ENST00000389138 IFNL2Q8IZJ0 200 aa6.83□□□□□ -1.32
ERCC4-202ENST00000389138 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.83□□□□□ -1.32
ERCC4-202ENST00000389138 USP33Q8TEY7 942 aa6.83□□□□□ -1.32
ERCC4-202ENST00000389138 ITPKCQ96DU7 683 aa6.83□□□□□ -1.32
ERCC4-202ENST00000389138 SCLT1Q96NL6 688 aa6.83□□□□□ -1.32
ERCC4-202ENST00000389138 EIF2AK1Q9BQI3 630 aaKnown RBP6.83□□□□□ -1.32
ERCC4-202ENST00000389138 CXorf56Q9H5V9 222 aa6.83□□□□□ -1.32
ERCC4-202ENST00000389138 AASDHPPTQ9NRN7 309 aa6.83□□□□□ -1.32
ERCC4-202ENST00000389138 IP6K2Q9UHH9 426 aa6.83□□□□□ -1.32
ERCC4-202ENST00000389138 ACAD8Q9UKU7 415 aa6.83□□□□□ -1.32
ERCC4-202ENST00000389138 SYNPO2Q9UMS6 1093 aa6.83□□□□□ -1.32
ERCC4-202ENST00000389138 NUP155O75694 1391 aa6.83□□□□□ -1.32
ERCC4-202ENST00000389138 WASHC2AQ641Q2 1341 aa6.83□□□□□ -1.32
ERCC4-202ENST00000389138 NPHP3Q7Z494 1330 aa6.83□□□□□ -1.32
ERCC4-202ENST00000389138 PRAG1Q86YV5 1406 aa6.83□□□□□ -1.32
ERCC4-202ENST00000389138 FOXO3O43524 673 aa6.83□□□□□ -1.32
ERCC4-202ENST00000389138 IRS1P35568 1242 aa6.83□□□□□ -1.32
ERCC4-202ENST00000389138 PERM1Q5SV97 790 aa6.83□□□□□ -1.32
ERCC4-202ENST00000389138 LMBRD2Q68DH5 695 aaPredicted RBP6.83□□□□□ -1.32
ERCC4-202ENST00000389138 TPH2Q8IWU9 490 aa6.83□□□□□ -1.32
ERCC4-202ENST00000389138 TBC1D20Q96BZ9 403 aa6.83□□□□□ -1.32
ERCC4-202ENST00000389138 MTMR8Q96EF0 704 aa6.83□□□□□ -1.32
ERCC4-202ENST00000389138 TMPRSS4Q9NRS4 437 aa6.83□□□□□ -1.32
ERCC4-202ENST00000389138 LRFN2Q9ULH4 789 aa6.83□□□□□ -1.32
ERCC4-202ENST00000389138 NEXMIFQ5QGS0 1516 aa6.82□□□□□ -1.32
ERCC4-202ENST00000389138 C11orf95C9JLR9 678 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms