RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 NCOR1O75376 2440 aa26.05■■□□□ 1.76
CNEP1R1-201ENST00000389134 MIGA1Q8NAN2 632 aa26.04■■□□□ 1.76
CNEP1R1-201ENST00000389134 SHCBP1Q8NEM2 672 aa26.04■■□□□ 1.76
CNEP1R1-201ENST00000389134 MYH8P13535 1937 aa26.04■■□□□ 1.76
CNEP1R1-201ENST00000389134 TMEM265A0A087WTH1 108 aa26.03■■□□□ 1.76
CNEP1R1-201ENST00000389134 IDH1O75874 414 aaKnown RBP26.03■■□□□ 1.76
CNEP1R1-201ENST00000389134 FOSL2P15408 326 aa26.03■■□□□ 1.76
CNEP1R1-201ENST00000389134 POLA2Q14181 598 aa26.03■■□□□ 1.76
CNEP1R1-201ENST00000389134 ANO1Q5XXA6 986 aa26.03■■□□□ 1.76
CNEP1R1-201ENST00000389134 TMED8Q6PL24 325 aaPredicted RBP26.03■■□□□ 1.76
CNEP1R1-201ENST00000389134 SPATC1LQ9H0A9 340 aa26.03■■□□□ 1.76
CNEP1R1-201ENST00000389134 MYCNP04198 464 aaPredicted RBP26.02■■□□□ 1.76
CNEP1R1-201ENST00000389134 TRIM27P14373 513 aa26.02■■□□□ 1.76
CNEP1R1-201ENST00000389134 SHMT1P34896 483 aa26.02■■□□□ 1.76
CNEP1R1-201ENST00000389134 ADCYAP1R1P41586 468 aa26.02■■□□□ 1.76
CNEP1R1-201ENST00000389134 A0A0G2JMZ2 1700 aa26.01■■□□□ 1.75
CNEP1R1-201ENST00000389134 TRIM43BA6NCK2 446 aa26.01■■□□□ 1.75
CNEP1R1-201ENST00000389134 ERCC3P19447 782 aa26.01■■□□□ 1.75
CNEP1R1-201ENST00000389134 GUCY1A2P33402 732 aa26.01■■□□□ 1.75
CNEP1R1-201ENST00000389134 LRRC41Q15345 812 aa26.01■■□□□ 1.75
CNEP1R1-201ENST00000389134 SH3RF1Q7Z6J0 888 aa26.01■■□□□ 1.75
CNEP1R1-201ENST00000389134 MAGEB6Q8N7X4 407 aa26.01■■□□□ 1.75
CNEP1R1-201ENST00000389134 TRIM43Q96BQ3 446 aaPredicted RBP26.01■■□□□ 1.75
CNEP1R1-201ENST00000389134 NAV1Q8NEY1 1877 aa26■■□□□ 1.75
CNEP1R1-201ENST00000389134 PLXNA1Q9UIW2 1896 aa26■■□□□ 1.75
CNEP1R1-201ENST00000389134 COBLO75128 1261 aa26■■□□□ 1.75
CNEP1R1-201ENST00000389134 PLCD1P51178 756 aa26■■□□□ 1.75
CNEP1R1-201ENST00000389134 ABRAQ8N0Z2 381 aa26■■□□□ 1.75
CNEP1R1-201ENST00000389134 MB21D1Q8N884 522 aa26■■□□□ 1.75
CNEP1R1-201ENST00000389134 SSH3Q8TE77 659 aa26■■□□□ 1.75
CNEP1R1-201ENST00000389134 FERMT2Q96AC1 680 aa26■■□□□ 1.75
CNEP1R1-201ENST00000389134 MROH8Q9H579 483 aa26■■□□□ 1.75
CNEP1R1-201ENST00000389134 DBNLQ9UJU6 430 aaKnown RBP26■■□□□ 1.75
CNEP1R1-201ENST00000389134 TACC3Q9Y6A5 838 aa26■■□□□ 1.75
CNEP1R1-201ENST00000389134 MUC3AQ02505 3323 aa25.99■■□□□ 1.75
CNEP1R1-201ENST00000389134 SURF6O75683 361 aaKnown RBP25.99■■□□□ 1.75
CNEP1R1-201ENST00000389134 SEPT2Q15019 361 aa25.99■■□□□ 1.75
CNEP1R1-201ENST00000389134 TANGO6Q9C0B7 1094 aa25.99■■□□□ 1.75
CNEP1R1-201ENST00000389134 PARP14Q460N5 1801 aa25.98■■□□□ 1.75
CNEP1R1-201ENST00000389134 ATP8B2P98198 1209 aa25.98■■□□□ 1.75
CNEP1R1-201ENST00000389134 TLE2Q04725 743 aa25.98■■□□□ 1.75
CNEP1R1-201ENST00000389134 MAP3K12Q12852 859 aa25.98■■□□□ 1.75
CNEP1R1-201ENST00000389134 PRAMEF19Q5SWL8 479 aa25.98■■□□□ 1.75
CNEP1R1-201ENST00000389134 POLR3DP05423 398 aaPredicted RBP25.97■■□□□ 1.75
CNEP1R1-201ENST00000389134 RNPC3Q96LT9 517 aaKnown RBP25.97■■□□□ 1.75
CNEP1R1-201ENST00000389134 PHF24Q9UPV7 400 aa25.97■■□□□ 1.75
CNEP1R1-201ENST00000389134 COL11A1P12107 1806 aaPredicted RBP25.97■■□□□ 1.75
CNEP1R1-201ENST00000389134 A0A1W2PRG0 241 aa25.96■■□□□ 1.75
CNEP1R1-201ENST00000389134 GABPAQ06546 454 aa25.96■■□□□ 1.75
CNEP1R1-201ENST00000389134 FAM47AQ5JRC9 791 aa25.96■■□□□ 1.75
CNEP1R1-201ENST00000389134 MAML3Q96JK9 1138 aa25.96■■□□□ 1.75
CNEP1R1-201ENST00000389134 CCDC8Q9H0W5 538 aaPredicted RBP25.96■■□□□ 1.75
CNEP1R1-201ENST00000389134 NRBP1Q9UHY1 535 aa25.96■■□□□ 1.75
CNEP1R1-201ENST00000389134 MPHOSPH10O00566 681 aaKnown RBP25.95■■□□□ 1.74
CNEP1R1-201ENST00000389134 CLTBP09497 229 aa25.95■■□□□ 1.74
CNEP1R1-201ENST00000389134 DSG3P32926 999 aa25.95■■□□□ 1.74
CNEP1R1-201ENST00000389134 PLS1Q14651 629 aa25.95■■□□□ 1.74
CNEP1R1-201ENST00000389134 NCAPG2Q86XI2 1143 aa25.95■■□□□ 1.74
CNEP1R1-201ENST00000389134 FRAT1Q92837 279 aaPredicted RBP25.95■■□□□ 1.74
CNEP1R1-201ENST00000389134 CLUAP1Q96AJ1 413 aa25.95■■□□□ 1.74
CNEP1R1-201ENST00000389134 TLR7Q9NYK1 1049 aaKnown RBP25.95■■□□□ 1.74
CNEP1R1-201ENST00000389134 TNNQ9UQP3 1299 aa25.95■■□□□ 1.74
CNEP1R1-201ENST00000389134 NOP58Q9Y2X3 529 aaKnown RBP25.95■■□□□ 1.74
CNEP1R1-201ENST00000389134 RARBP10826 455 aa25.94■■□□□ 1.74
CNEP1R1-201ENST00000389134 FCER1AP12319 257 aa25.94■■□□□ 1.74
CNEP1R1-201ENST00000389134 XPNPEP3Q9NQH7 507 aa25.94■■□□□ 1.74
CNEP1R1-201ENST00000389134 KIAA0355O15063 1070 aa25.93■■□□□ 1.74
CNEP1R1-201ENST00000389134 BCAR3O75815 825 aa25.93■■□□□ 1.74
CNEP1R1-201ENST00000389134 ITGB8P26012 769 aa25.93■■□□□ 1.74
CNEP1R1-201ENST00000389134 RNF180Q86T96 592 aa25.93■■□□□ 1.74
CNEP1R1-201ENST00000389134 EAF2Q96CJ1 260 aaPredicted RBP25.93■■□□□ 1.74
CNEP1R1-201ENST00000389134 RIOK1Q9BRS2 568 aaKnown RBP25.93■■□□□ 1.74
CNEP1R1-201ENST00000389134 RAG1P15918 1043 aa25.92■■□□□ 1.74
CNEP1R1-201ENST00000389134 TMEM179Q6ZVK1 233 aa25.92■■□□□ 1.74
CNEP1R1-201ENST00000389134 ANTXR1Q9H6X2 564 aa25.92■■□□□ 1.74
CNEP1R1-201ENST00000389134 MAGEB6P1A0A0J9YX57 407 aa25.91■■□□□ 1.74
CNEP1R1-201ENST00000389134 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.91■■□□□ 1.74
CNEP1R1-201ENST00000389134 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.91■■□□□ 1.74
CNEP1R1-201ENST00000389134 FLOT1O75955 427 aa25.91■■□□□ 1.74
CNEP1R1-201ENST00000389134 SLC25A27O95847 323 aa25.91■■□□□ 1.74
CNEP1R1-201ENST00000389134 EPHB4P54760 987 aa25.91■■□□□ 1.74
CNEP1R1-201ENST00000389134 FPGSQ05932 587 aa25.91■■□□□ 1.74
CNEP1R1-201ENST00000389134 TJAP1Q5JTD0 557 aa25.91■■□□□ 1.74
CNEP1R1-201ENST00000389134 TMEM57Q8N5G2 664 aa25.91■■□□□ 1.74
CNEP1R1-201ENST00000389134 MCM9Q9NXL9 1143 aa25.91■■□□□ 1.74
CNEP1R1-201ENST00000389134 KIAA1755Q5JYT7 1200 aa25.9■■□□□ 1.74
CNEP1R1-201ENST00000389134 ATG4CQ96DT6 458 aa25.9■■□□□ 1.74
CNEP1R1-201ENST00000389134 CRNKL1Q9BZJ0 848 aaKnown RBP25.9■■□□□ 1.74
CNEP1R1-201ENST00000389134 PQBP1O60828 265 aaKnown RBP25.89■■□□□ 1.74
CNEP1R1-201ENST00000389134 DNAJB2P25686 324 aa25.89■■□□□ 1.74
CNEP1R1-201ENST00000389134 GRIN2CQ14957 1233 aa25.89■■□□□ 1.74
CNEP1R1-201ENST00000389134 SH2D4AQ9H788 454 aa25.89■■□□□ 1.74
CNEP1R1-201ENST00000389134 ARHGEF10LQ9HCE6 1279 aa25.89■■□□□ 1.74
CNEP1R1-201ENST00000389134 TMEM39AQ9NV64 488 aa25.89■■□□□ 1.74
CNEP1R1-201ENST00000389134 DIS3Q9Y2L1 958 aaKnown RBP25.89■■□□□ 1.74
CNEP1R1-201ENST00000389134 BAZ2AQ9UIF9 1905 aaKnown RBP25.88■■□□□ 1.73
CNEP1R1-201ENST00000389134 ROBO3Q96MS0 1386 aa25.88■■□□□ 1.73
CNEP1R1-201ENST00000389134 A0A1W2PQ45 241 aaPredicted RBP25.88■■□□□ 1.73
CNEP1R1-201ENST00000389134 A0A1W2PQY0 241 aa25.88■■□□□ 1.73
CNEP1R1-201ENST00000389134 PGK1P00558 417 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms