RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 ST5P78524 1137 aa1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 RHDQ02161 417 aa1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 LPAL2Q16609 132 aa1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 DOK7Q18PE1 504 aa1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 SKOR2Q2VWA4 1001 aaPredicted RBP1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 SPECC1Q5M775 1068 aa1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 C1QL3Q5VWW1 255 aa1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 RNF180Q86T96 592 aa1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 C12orf40Q86WS4 652 aa1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 SLC44A3Q8N4M1 653 aa1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 CELF5Q8N6W0 485 aaKnown RBP1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 BANK1Q8NDB2 785 aa1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 SUPT20HQ8NEM7 779 aa1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 PIGBQ92521 554 aa1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 NECTIN2Q92692 538 aa1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 OPTNQ96CV9 577 aa1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 MS4A4AQ96JQ5 239 aa1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 LZTS2Q9BRK4 669 aa1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 RBM42Q9BTD8 480 aaKnown RBP1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 PHF7Q9BWX1 381 aaPredicted RBP1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 KRTAP9-2Q9BYQ4 174 aa1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 PLA2G2FQ9BZM2 168 aa1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 SPRTNQ9H040 489 aaPredicted RBP1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 RUBCNLQ9H714 662 aa1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 WDR70Q9NW82 654 aa1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 RNF216Q9NWF9 866 aaPredicted RBP1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 ZSCAN32Q9NX65 697 aa1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 FBXL21Q9UKT6 434 aa1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 TIMELESSQ9UNS1 1208 aa1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 SCAF8Q9UPN6 1271 aaKnown RBP1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 SORCS3Q9UPU3 1222 aa1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 POLR2AP24928 1970 aaKnown RBP1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 CSMD2Q7Z408 3487 aa1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 POLR3AO14802 1390 aaPredicted RBP1.72□□□□□ -2.13
RNU6-42P-201ENST00000384165 UBR3Q6ZT12 1888 aa1.71□□□□□ -2.14
RNU6-42P-201ENST00000384165 GRIN2DO15399 1336 aa1.71□□□□□ -2.14
RNU6-42P-201ENST00000384165 CLEC18AA5D8T8 446 aa1.71□□□□□ -2.14
RNU6-42P-201ENST00000384165 LAMTOR5O43504 91 aa1.71□□□□□ -2.14
RNU6-42P-201ENST00000384165 AGFG2O95081 481 aa1.71□□□□□ -2.14
RNU6-42P-201ENST00000384165 PRKAR2AP13861 404 aaKnown RBP1.71□□□□□ -2.14
RNU6-42P-201ENST00000384165 COL8A1P27658 744 aa1.71□□□□□ -2.14
RNU6-42P-201ENST00000384165 IREB2P48200 963 aaKnown RBP1.71□□□□□ -2.14
RNU6-42P-201ENST00000384165 KRT83P78385 493 aa1.71□□□□□ -2.14
RNU6-42P-201ENST00000384165 FGD1P98174 961 aa1.71□□□□□ -2.14
RNU6-42P-201ENST00000384165 CSTF1Q05048 431 aaKnown RBP1.71□□□□□ -2.14
RNU6-42P-201ENST00000384165 RNF43Q68DV7 783 aa1.71□□□□□ -2.14
RNU6-42P-201ENST00000384165 PCSK4Q6UW60 755 aa1.71□□□□□ -2.14
RNU6-42P-201ENST00000384165 CLEC18BQ6UXF7 455 aa1.71□□□□□ -2.14
RNU6-42P-201ENST00000384165 PRIMA1Q86XR5 153 aa1.71□□□□□ -2.14
RNU6-42P-201ENST00000384165 ANKRD13AQ8IZ07 590 aa1.71□□□□□ -2.14
RNU6-42P-201ENST00000384165 CHCHD4Q8N4Q1 142 aa1.71□□□□□ -2.14
RNU6-42P-201ENST00000384165 CLEC18CQ8NCF0 446 aa1.71□□□□□ -2.14
RNU6-42P-201ENST00000384165 GDPD5Q8WTR4 605 aa1.71□□□□□ -2.14
RNU6-42P-201ENST00000384165 IP6K1Q92551 441 aa1.71□□□□□ -2.14
RNU6-42P-201ENST00000384165 KIF2CQ99661 725 aa1.71□□□□□ -2.14
RNU6-42P-201ENST00000384165 DDX50Q9BQ39 737 aaKnown RBP1.71□□□□□ -2.14
RNU6-42P-201ENST00000384165 SEMA4CQ9C0C4 833 aa1.71□□□□□ -2.14
RNU6-42P-201ENST00000384165 SUGCTQ9HAC7 445 aa1.71□□□□□ -2.14
RNU6-42P-201ENST00000384165 KCNK12Q9HB15 430 aa1.71□□□□□ -2.14
RNU6-42P-201ENST00000384165 BSDC1Q9NW68 430 aaPredicted RBP1.71□□□□□ -2.14
RNU6-42P-201ENST00000384165 PHTF1Q9UMS5 762 aa1.71□□□□□ -2.14
RNU6-42P-201ENST00000384165 PIK3C2GO75747 1445 aa1.71□□□□□ -2.14
RNU6-42P-201ENST00000384165 ZANQ9Y493 2812 aa1.71□□□□□ -2.14
RNU6-42P-201ENST00000384165 MN1Q10571 1320 aaPredicted RBP1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 PHLPP2Q6ZVD8 1323 aa1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 A1L4Q6 167 aa1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 WIPF3A6NGB9 483 aa1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 BTBD19C9JJ37 291 aa1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 SOX12O15370 315 aa1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 PQBP1O60828 265 aaKnown RBP1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 BRD1O95696 1058 aa1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 KRT10P13645 584 aa1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 NPR3P17342 541 aa1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 CSRP1P21291 193 aaKnown RBP1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 CNGA1P29973 690 aa1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 GJA5P36382 358 aa1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 LTBQ06643 244 aa1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 CYP4F3Q08477 520 aa1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 SAFB2Q14151 953 aaKnown RBP eCLIP1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 SUPT20HL1Q3ZLR7 823 aa1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 TIGD5Q53EQ6 642 aa1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 TCEAL5Q5H9L2 206 aa1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 DDX60LQ5H9U9 1706 aaKnown RBP1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 ZNF484Q5JVG2 852 aa1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 PHF19Q5T6S3 580 aa1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 C1orf53Q5VUE5 145 aa1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 CWF19L1Q69YN2 538 aaKnown RBP1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 CAPN12Q6ZSI9 719 aa1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 RPAINQ86UA6 219 aa1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 ARHGEF25Q86VW2 580 aa1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 RPUSD2Q8IZ73 545 aaKnown RBP1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 SLC34A3Q8N130 599 aa1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 NAGSQ8N159 534 aa1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 PPM1NQ8N819 430 aa1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 KCNH5Q8NCM2 988 aa1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 PRR7Q8TB68 274 aa1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 MRPL38Q96DV4 380 aaKnown RBP1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 ZNF668Q96K58 619 aaPredicted RBP1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 CRBNQ96SW2 442 aa1.7□□□□□ -2.14
RNU6-42P-201ENST00000384165 CSRNP2Q9H175 543 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms