RNA–Protein interactions for RNA: ENST00000382490.9

MSRA-202, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 1 (best) BASIC

Gene MSRA, Length 1,460 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-202ENST00000382490 USP28Q96RU2 1077 aa15.2■□□□□ 0.02
MSRA-202ENST00000382490 LZTS2Q9BRK4 669 aa15.2■□□□□ 0.02
MSRA-202ENST00000382490 SYT17Q9BSW7 474 aa15.2■□□□□ 0.02
MSRA-202ENST00000382490 KCNJ14Q9UNX9 436 aa15.2■□□□□ 0.02
MSRA-202ENST00000382490 MMP1P03956 469 aa15.19■□□□□ 0.02
MSRA-202ENST00000382490 SMARCA1P28370 1054 aa15.19■□□□□ 0.02
MSRA-202ENST00000382490 RRP1BQ14684 758 aaKnown RBP15.19■□□□□ 0.02
MSRA-202ENST00000382490 PPP4R3BQ5MIZ7 849 aa15.19■□□□□ 0.02
MSRA-202ENST00000382490 MYSM1Q5VVJ2 828 aa15.19■□□□□ 0.02
MSRA-202ENST00000382490 CLEC10AQ8IUN9 316 aa15.19■□□□□ 0.02
MSRA-202ENST00000382490 SIAH1Q8IUQ4 282 aa15.19■□□□□ 0.02
MSRA-202ENST00000382490 MKL1Q969V6 931 aa15.19■□□□□ 0.02
MSRA-202ENST00000382490 SPATA32Q96LK8 384 aa15.19■□□□□ 0.02
MSRA-202ENST00000382490 CSRNP1Q96S65 589 aa15.19■□□□□ 0.02
MSRA-202ENST00000382490 RTEL1Q9NZ71 1219 aa15.19■□□□□ 0.02
MSRA-202ENST00000382490 NYAP2Q9P242 653 aa15.19■□□□□ 0.02
MSRA-202ENST00000382490 HERC5Q9UII4 1024 aaKnown RBP15.19■□□□□ 0.02
MSRA-202ENST00000382490 CNOT7Q9UIV1 285 aaKnown RBP15.19■□□□□ 0.02
MSRA-202ENST00000382490 GJA3Q9Y6H8 435 aa15.19■□□□□ 0.02
MSRA-202ENST00000382490 ZNF541Q9H0D2 1346 aa15.18■□□□□ 0.02
MSRA-202ENST00000382490 USP17L5A8MUK1 530 aa15.18■□□□□ 0.02
MSRA-202ENST00000382490 KLRF2D3W0D1 207 aa15.18■□□□□ 0.02
MSRA-202ENST00000382490 MPHOSPH10O00566 681 aaKnown RBP15.18■□□□□ 0.02
MSRA-202ENST00000382490 CYTH3O43739 400 aa15.18■□□□□ 0.02
MSRA-202ENST00000382490 MYO1BO43795 1136 aa15.18■□□□□ 0.02
MSRA-202ENST00000382490 EGFRP00533 1210 aa15.18■□□□□ 0.02
MSRA-202ENST00000382490 PARP1P09874 1014 aaKnown RBP15.18■□□□□ 0.02
MSRA-202ENST00000382490 SNHG28P0DPA3 235 aa15.18■□□□□ 0.02
MSRA-202ENST00000382490 VEGFAP15692 232 aaPredicted RBP15.18■□□□□ 0.02
MSRA-202ENST00000382490 LMNB1P20700 586 aa15.18■□□□□ 0.02
MSRA-202ENST00000382490 JAG1P78504 1218 aa15.18■□□□□ 0.02
MSRA-202ENST00000382490 PFKFB3Q16875 520 aaPredicted RBP15.18■□□□□ 0.02
MSRA-202ENST00000382490 SHROOM1Q2M3G4 852 aaPredicted RBP15.18■□□□□ 0.02
MSRA-202ENST00000382490 USP17L2Q6R6M4 530 aa15.18■□□□□ 0.02
MSRA-202ENST00000382490 MICALL2Q8IY33 904 aa15.18■□□□□ 0.02
MSRA-202ENST00000382490 TRIM34Q9BYJ4 488 aa15.18■□□□□ 0.02
MSRA-202ENST00000382490 KANSL2Q9H9L4 492 aa15.18■□□□□ 0.02
MSRA-202ENST00000382490 VEZTQ9HBM0 779 aa15.18■□□□□ 0.02
MSRA-202ENST00000382490 RBM27Q9P2N5 1060 aaKnown RBP15.18■□□□□ 0.02
MSRA-202ENST00000382490 BTBD18B2RXH4 712 aa15.17■□□□□ 0.02
MSRA-202ENST00000382490 TBC1D12O60347 775 aa15.17■□□□□ 0.02
MSRA-202ENST00000382490 GOLGA8HP0CJ92 632 aa15.17■□□□□ 0.02
MSRA-202ENST00000382490 PDHBP11177 359 aa15.17■□□□□ 0.02
MSRA-202ENST00000382490 SCG2P13521 617 aa15.17■□□□□ 0.02
MSRA-202ENST00000382490 MAP3K10Q02779 954 aa15.17■□□□□ 0.02
MSRA-202ENST00000382490 RBM26Q5T8P6 1007 aaKnown RBP15.17■□□□□ 0.02
MSRA-202ENST00000382490 CAVIN1Q6NZI2 390 aaKnown RBP15.17■□□□□ 0.02
MSRA-202ENST00000382490 RASGRP2Q7LDG7 609 aa15.17■□□□□ 0.02
MSRA-202ENST00000382490 LRRC47Q8N1G4 583 aaKnown RBP15.17■□□□□ 0.02
MSRA-202ENST00000382490 PGBD1Q96JS3 809 aa15.17■□□□□ 0.02
MSRA-202ENST00000382490 PHF20Q9BVI0 1012 aa15.17■□□□□ 0.02
MSRA-202ENST00000382490 SPZ1Q9BXG8 430 aa15.17■□□□□ 0.02
MSRA-202ENST00000382490 FTOQ9C0B1 505 aaKnown RBP eCLIP15.17■□□□□ 0.02
MSRA-202ENST00000382490 FOXP1Q9H334 677 aaPredicted RBP15.17■□□□□ 0.02
MSRA-202ENST00000382490 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.17■□□□□ 0.023e-7■■■■■ 36.9
MSRA-202ENST00000382490 VPS54Q9P1Q0 977 aa15.17■□□□□ 0.02
MSRA-202ENST00000382490 MTMR7Q9Y216 660 aa15.17■□□□□ 0.02
MSRA-202ENST00000382490 XBP1P17861 261 aa15.16■□□□□ 0.02
MSRA-202ENST00000382490 SEPT2Q15019 361 aa15.16■□□□□ 0.02
MSRA-202ENST00000382490 SAFBQ15424 915 aaKnown RBP eCLIP15.16■□□□□ 0.02
MSRA-202ENST00000382490 ABCB5Q2M3G0 1257 aa15.16■□□□□ 0.02
MSRA-202ENST00000382490 TMEM179Q6ZVK1 233 aa15.16■□□□□ 0.02
MSRA-202ENST00000382490 SAMD7Q7Z3H4 446 aa15.16■□□□□ 0.02
MSRA-202ENST00000382490 DIS3L2Q8IYB7 885 aaKnown RBP15.16■□□□□ 0.02
MSRA-202ENST00000382490 TMEM39BQ9GZU3 492 aa15.16■□□□□ 0.02
MSRA-202ENST00000382490 TMEM63CQ9P1W3 806 aa15.16■□□□□ 0.02
MSRA-202ENST00000382490 CLIC4Q9Y696 253 aa15.16■□□□□ 0.02
MSRA-202ENST00000382490 GREB1LQ9C091 1923 aaPredicted RBP15.16■□□□□ 0.02
MSRA-202ENST00000382490 EEF2P13639 858 aaKnown RBP15.15■□□□□ 0.02
MSRA-202ENST00000382490 NASPP49321 788 aaPredicted RBP15.15■□□□□ 0.02
MSRA-202ENST00000382490 CEBPZQ03701 1054 aaKnown RBP15.15■□□□□ 0.02
MSRA-202ENST00000382490 NPY5RQ15761 445 aa15.15■□□□□ 0.02
MSRA-202ENST00000382490 CDAN1Q8IWY9 1227 aa15.15■□□□□ 0.02
MSRA-202ENST00000382490 OXER1Q8TDS5 423 aa15.15■□□□□ 0.02
MSRA-202ENST00000382490 RIOX1Q9H6W3 641 aa15.15■□□□□ 0.02
MSRA-202ENST00000382490 POLR3EQ9NVU0 708 aa15.15■□□□□ 0.02
MSRA-202ENST00000382490 GDF11O95390 407 aa15.14■□□□□ 0.01
MSRA-202ENST00000382490 TNNI2P48788 182 aa15.14■□□□□ 0.01
MSRA-202ENST00000382490 RASA3Q14644 834 aa15.14■□□□□ 0.01
MSRA-202ENST00000382490 TBC1D10BQ4KMP7 808 aaPredicted RBP15.14■□□□□ 0.01
MSRA-202ENST00000382490 ASPRV1Q53RT3 343 aa15.14■□□□□ 0.01
MSRA-202ENST00000382490 NOSTRINQ8IVI9 506 aa15.14■□□□□ 0.01
MSRA-202ENST00000382490 LINC00301Q8NCQ3 95 aa15.14■□□□□ 0.01
MSRA-202ENST00000382490 PIBF1Q8WXW3 757 aa15.14■□□□□ 0.01
MSRA-202ENST00000382490 CPVLQ9H3G5 476 aa15.14■□□□□ 0.01
MSRA-202ENST00000382490 SH3GLB2Q9NR46 395 aa15.14■□□□□ 0.01
MSRA-202ENST00000382490 H7C1D1 291 aa15.14■□□□□ 0.01
MSRA-202ENST00000382490 YEATS4O95619 227 aa15.14■□□□□ 0.01
MSRA-202ENST00000382490 GH2P01242 217 aa15.14■□□□□ 0.01
MSRA-202ENST00000382490 YBX3P16989 372 aaKnown RBP eCLIP15.14■□□□□ 0.01
MSRA-202ENST00000382490 ATP2B2Q01814 1243 aa15.14■□□□□ 0.01
MSRA-202ENST00000382490 ZNF543Q08ER8 600 aa15.14■□□□□ 0.01
MSRA-202ENST00000382490 NR5A1Q13285 461 aa15.14■□□□□ 0.01
MSRA-202ENST00000382490 GNL2Q13823 731 aaKnown RBP15.14■□□□□ 0.01
MSRA-202ENST00000382490 ANO1Q5XXA6 986 aa15.14■□□□□ 0.01
MSRA-202ENST00000382490 TEPSINQ96N21 525 aa15.14■□□□□ 0.01
MSRA-202ENST00000382490 UBA5Q9GZZ9 404 aa15.14■□□□□ 0.01
MSRA-202ENST00000382490 CABP5Q9NP86 173 aa15.14■□□□□ 0.01
MSRA-202ENST00000382490 ASTN2O75129 1339 aaPredicted RBP15.13■□□□□ 0.01
MSRA-202ENST00000382490 KRT2P35908 639 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms