RNA–Protein interactions for RNA: ENST00000380221.7

TRAPPC10-202, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC10, Length 1,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-202ENST00000380221 MKL1Q969V6 931 aa32.32■■■□□ 2.77
TRAPPC10-202ENST00000380221 SMC3Q9UQE7 1217 aa32.32■■■□□ 2.77
TRAPPC10-202ENST00000380221 DHX16O60231 1041 aaKnown RBP32.32■■■□□ 2.76
TRAPPC10-202ENST00000380221 JAK2O60674 1132 aa32.32■■■□□ 2.76
TRAPPC10-202ENST00000380221 PPFIA3O75145 1194 aa32.32■■■□□ 2.76
TRAPPC10-202ENST00000380221 NSUN7Q8NE18 718 aaKnown RBP32.32■■■□□ 2.76
TRAPPC10-202ENST00000380221 CPLX1O14810 134 aa32.31■■■□□ 2.76
TRAPPC10-202ENST00000380221 TRAF5O00463 557 aa32.3■■■□□ 2.76
TRAPPC10-202ENST00000380221 PPP1R12BO60237 982 aaPredicted RBP32.3■■■□□ 2.76
TRAPPC10-202ENST00000380221 NF2P35240 595 aa32.3■■■□□ 2.76
TRAPPC10-202ENST00000380221 CTCFLQ8NI51 663 aaPredicted RBP32.3■■■□□ 2.76
TRAPPC10-202ENST00000380221 LLPHQ9BRT6 129 aaKnown RBP32.3■■■□□ 2.76
TRAPPC10-202ENST00000380221 DOCK1Q14185 1865 aa32.3■■■□□ 2.76
TRAPPC10-202ENST00000380221 A0A1W2PRG0 241 aa32.3■■■□□ 2.76
TRAPPC10-202ENST00000380221 FMR1Q06787 632 aaKnown RBP eCLIP32.3■■■□□ 2.761e-8■■■■■ 30.9
TRAPPC10-202ENST00000380221 SCYL3Q8IZE3 742 aa32.3■■■□□ 2.76
TRAPPC10-202ENST00000380221 DDX55Q8NHQ9 600 aaKnown RBP eCLIP32.3■■■□□ 2.76
TRAPPC10-202ENST00000380221 GJB2P29033 226 aa32.29■■■□□ 2.76
TRAPPC10-202ENST00000380221 NTRK3Q16288 839 aa32.29■■■□□ 2.76
TRAPPC10-202ENST00000380221 CMTR1Q8N1G2 835 aaKnown RBP32.29■■■□□ 2.76
TRAPPC10-202ENST00000380221 ACER1Q8TDN7 264 aa32.29■■■□□ 2.76
TRAPPC10-202ENST00000380221 TNPO1Q92973 898 aaKnown RBP32.29■■■□□ 2.76
TRAPPC10-202ENST00000380221 CCDC196A0A1B0GTZ2 297 aa32.28■■■□□ 2.76
TRAPPC10-202ENST00000380221 PTPDC1A2A3K4 754 aa32.28■■■□□ 2.76
TRAPPC10-202ENST00000380221 ECE1P42892 770 aa32.28■■■□□ 2.76
TRAPPC10-202ENST00000380221 PKP1Q13835 747 aa32.28■■■□□ 2.76
TRAPPC10-202ENST00000380221 PPP2R5BQ15173 497 aa32.28■■■□□ 2.76
TRAPPC10-202ENST00000380221 SMARCC2Q8TAQ2 1214 aa32.28■■■□□ 2.76
TRAPPC10-202ENST00000380221 DDX11Q96FC9 970 aa32.28■■■□□ 2.76
TRAPPC10-202ENST00000380221 MAP3K14Q99558 947 aa32.28■■■□□ 2.76
TRAPPC10-202ENST00000380221 ARHGEF10LQ9HCE6 1279 aa32.28■■■□□ 2.76
TRAPPC10-202ENST00000380221 GINM1Q9NU53 330 aa32.28■■■□□ 2.76
TRAPPC10-202ENST00000380221 USP17L5A8MUK1 530 aa32.27■■■□□ 2.76
TRAPPC10-202ENST00000380221 GRM4Q14833 912 aa32.27■■■□□ 2.76
TRAPPC10-202ENST00000380221 RBM28Q9NW13 759 aaKnown RBP32.27■■■□□ 2.76
TRAPPC10-202ENST00000380221 PDHBP11177 359 aa32.27■■■□□ 2.76
TRAPPC10-202ENST00000380221 STAG2Q8N3U4 1231 aa32.27■■■□□ 2.76
TRAPPC10-202ENST00000380221 CCDC82Q8N4S0 544 aa32.27■■■□□ 2.76
TRAPPC10-202ENST00000380221 MAD2L2Q9UI95 211 aa32.27■■■□□ 2.76
TRAPPC10-202ENST00000380221 RAD21O60216 631 aa32.26■■■□□ 2.75
TRAPPC10-202ENST00000380221 PLEKHA8P1O95397 391 aa32.26■■■□□ 2.75
TRAPPC10-202ENST00000380221 USP17L2Q6R6M4 530 aa32.26■■■□□ 2.75
TRAPPC10-202ENST00000380221 MOB2Q70IA6 237 aa32.26■■■□□ 2.75
TRAPPC10-202ENST00000380221 GOLGA8HP0CJ92 632 aa32.25■■■□□ 2.75
TRAPPC10-202ENST00000380221 KIF5BP33176 963 aa32.25■■■□□ 2.75
TRAPPC10-202ENST00000380221 CPLX2Q6PUV4 134 aaKnown RBP32.25■■■□□ 2.75
TRAPPC10-202ENST00000380221 PHKBQ93100 1093 aa32.25■■■□□ 2.75
TRAPPC10-202ENST00000380221 PICK1Q9NRD5 415 aa32.25■■■□□ 2.75
TRAPPC10-202ENST00000380221 MAP3K9P80192 1104 aa32.24■■■□□ 2.75
TRAPPC10-202ENST00000380221 TTLL12Q14166 644 aaPredicted RBP32.24■■■□□ 2.75
TRAPPC10-202ENST00000380221 PPP1R3FQ6ZSY5 799 aaPredicted RBP32.24■■■□□ 2.75
TRAPPC10-202ENST00000380221 TMX2Q9Y320 296 aa32.24■■■□□ 2.75
TRAPPC10-202ENST00000380221 OTOFQ9HC10 1997 aa32.24■■■□□ 2.75
TRAPPC10-202ENST00000380221 PARP1P09874 1014 aaKnown RBP32.24■■■□□ 2.75
TRAPPC10-202ENST00000380221 IREB2P48200 963 aaKnown RBP32.24■■■□□ 2.75
TRAPPC10-202ENST00000380221 NOL9Q5SY16 702 aaKnown RBP32.24■■■□□ 2.75
TRAPPC10-202ENST00000380221 PAPPA2Q9BXP8 1791 aa32.24■■■□□ 2.75
TRAPPC10-202ENST00000380221 ZNF408Q9H9D4 720 aa32.24■■■□□ 2.75
TRAPPC10-202ENST00000380221 GPBP1L1Q9HC44 474 aaPredicted RBP32.24■■■□□ 2.75
TRAPPC10-202ENST00000380221 PALM3A6NDB9 673 aaPredicted RBP32.23■■■□□ 2.75
TRAPPC10-202ENST00000380221 F5H6K3 240 aa32.23■■■□□ 2.75
TRAPPC10-202ENST00000380221 CDKL5O76039 1030 aa32.23■■■□□ 2.75
TRAPPC10-202ENST00000380221 SNHG28P0DPA3 235 aa32.23■■■□□ 2.75
TRAPPC10-202ENST00000380221 IFNAR1P17181 557 aa32.23■■■□□ 2.75
TRAPPC10-202ENST00000380221 PTPRAP18433 802 aa32.23■■■□□ 2.75
TRAPPC10-202ENST00000380221 KLRC3Q07444 240 aa32.23■■■□□ 2.75
TRAPPC10-202ENST00000380221 TMTC3Q6ZXV5 915 aa32.23■■■□□ 2.75
TRAPPC10-202ENST00000380221 FRMPD2Q68DX3 1309 aaPredicted RBP32.22■■■□□ 2.75
TRAPPC10-202ENST00000380221 FDPSP14324 419 aaKnown RBP32.22■■■□□ 2.75
TRAPPC10-202ENST00000380221 VGLL4Q14135 290 aa32.22■■■□□ 2.75
TRAPPC10-202ENST00000380221 SLFN13Q68D06 897 aa32.22■■■□□ 2.75
TRAPPC10-202ENST00000380221 SRBD1Q8N5C6 995 aaKnown RBP32.22■■■□□ 2.75
TRAPPC10-202ENST00000380221 GMCL1P1Q8NEA9 526 aa32.22■■■□□ 2.75
TRAPPC10-202ENST00000380221 ZBTB4Q9P1Z0 1013 aaPredicted RBP32.22■■■□□ 2.75
TRAPPC10-202ENST00000380221 ZDHHC9Q9Y397 364 aa32.22■■■□□ 2.75
TRAPPC10-202ENST00000380221 HMGN5P82970 282 aaKnown RBP32.22■■■□□ 2.75
TRAPPC10-202ENST00000380221 NBPF11Q86T75 865 aa32.22■■■□□ 2.75
TRAPPC10-202ENST00000380221 SYNPO2Q9UMS6 1093 aa32.22■■■□□ 2.75
TRAPPC10-202ENST00000380221 FUT2Q10981 343 aa32.21■■■□□ 2.75
TRAPPC10-202ENST00000380221 ZYXQ15942 572 aaKnown RBP32.21■■■□□ 2.75
TRAPPC10-202ENST00000380221 SLC26A6Q9BXS9 759 aa32.21■■■□□ 2.75
TRAPPC10-202ENST00000380221 SNCAIPQ9Y6H5 919 aa32.21■■■□□ 2.75
TRAPPC10-202ENST00000380221 NDUFB10O96000 172 aa32.2■■■□□ 2.75
TRAPPC10-202ENST00000380221 MAP3K11Q16584 847 aa32.2■■■□□ 2.75
TRAPPC10-202ENST00000380221 CHADLQ6NUI6 762 aa32.2■■■□□ 2.75
TRAPPC10-202ENST00000380221 KLRF2D3W0D1 207 aa32.19■■■□□ 2.74
TRAPPC10-202ENST00000380221 KIAA1755Q5JYT7 1200 aa32.19■■■□□ 2.74
TRAPPC10-202ENST00000380221 FAM184AQ8NB25 1140 aa32.19■■■□□ 2.74
TRAPPC10-202ENST00000380221 SH2D4AQ9H788 454 aa32.19■■■□□ 2.74
TRAPPC10-202ENST00000380221 ORC3Q9UBD5 711 aaPredicted RBP32.19■■■□□ 2.74
TRAPPC10-202ENST00000380221 CSADQ9Y600 493 aa32.19■■■□□ 2.74
TRAPPC10-202ENST00000380221 ZHX2Q9Y6X8 837 aa32.19■■■□□ 2.74
TRAPPC10-202ENST00000380221 UBE2Q2LH0YL09 131 aa32.19■■■□□ 2.74
TRAPPC10-202ENST00000380221 FMNL1O95466 1100 aaPredicted RBP32.19■■■□□ 2.74
TRAPPC10-202ENST00000380221 SSRP1Q08945 709 aaKnown RBP32.19■■■□□ 2.74
TRAPPC10-202ENST00000380221 KCTD1Q719H9 257 aa32.19■■■□□ 2.74
TRAPPC10-202ENST00000380221 ARMC9Q7Z3E5 817 aa32.19■■■□□ 2.74
TRAPPC10-202ENST00000380221 SPICE1Q8N0Z3 855 aa32.19■■■□□ 2.74
TRAPPC10-202ENST00000380221 CPVLQ9H3G5 476 aa32.19■■■□□ 2.74
TRAPPC10-202ENST00000380221 GOPCQ9HD26 462 aa32.19■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms