RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 SRPRBQ9Y5M8 271 aaKnown RBP9.13□□□□□ -0.95
PDLIM5-204ENST00000380176 TRIM66O15016 1216 aa9.13□□□□□ -0.95
PDLIM5-204ENST00000380176 SERPINB2P05120 415 aa9.13□□□□□ -0.95
PDLIM5-204ENST00000380176 CALM1P0DP23 149 aa9.13□□□□□ -0.95
PDLIM5-204ENST00000380176 CALM2P0DP24 149 aa9.13□□□□□ -0.95
PDLIM5-204ENST00000380176 CALM3P0DP25 149 aa9.13□□□□□ -0.95
PDLIM5-204ENST00000380176 HSPA1LP34931 641 aa9.13□□□□□ -0.95
PDLIM5-204ENST00000380176 USP5P45974 858 aa9.13□□□□□ -0.95
PDLIM5-204ENST00000380176 PLCD1P51178 756 aa9.13□□□□□ -0.95
PDLIM5-204ENST00000380176 TFAP4Q01664 338 aa9.13□□□□□ -0.95
PDLIM5-204ENST00000380176 PDE4BQ07343 736 aa9.13□□□□□ -0.95
PDLIM5-204ENST00000380176 SLC44A5Q8NCS7 719 aa9.13□□□□□ -0.95
PDLIM5-204ENST00000380176 TGFBRAP1Q8WUH2 860 aa9.13□□□□□ -0.95
PDLIM5-204ENST00000380176 TSC1Q92574 1164 aa9.13□□□□□ -0.95
PDLIM5-204ENST00000380176 RPGRQ92834 1020 aaKnown RBP9.13□□□□□ -0.95
PDLIM5-204ENST00000380176 TNFRSF25Q93038 417 aa9.13□□□□□ -0.95
PDLIM5-204ENST00000380176 POM121Q96HA1 1249 aa9.13□□□□□ -0.95
PDLIM5-204ENST00000380176 NAV1Q8NEY1 1877 aa9.13□□□□□ -0.95
PDLIM5-204ENST00000380176 CRY2Q49AN0 593 aa9.13□□□□□ -0.95
PDLIM5-204ENST00000380176 CTCFLQ8NI51 663 aaPredicted RBP9.13□□□□□ -0.95
PDLIM5-204ENST00000380176 A0A087X0B3 334 aa9.12□□□□□ -0.95
PDLIM5-204ENST00000380176 USP17L3A6NCW0 530 aa9.12□□□□□ -0.95
PDLIM5-204ENST00000380176 USP17L4A6NCW7 530 aa9.12□□□□□ -0.95
PDLIM5-204ENST00000380176 UFL1O94874 794 aa9.12□□□□□ -0.95
PDLIM5-204ENST00000380176 SMC2O95347 1197 aa9.12□□□□□ -0.95
PDLIM5-204ENST00000380176 XBP1P17861 261 aa9.12□□□□□ -0.95
PDLIM5-204ENST00000380176 USP17L1Q7RTZ2 530 aa9.12□□□□□ -0.95
PDLIM5-204ENST00000380176 ZNF804AQ7Z570 1209 aa9.12□□□□□ -0.95
PDLIM5-204ENST00000380176 TEX2Q8IWB9 1127 aa9.12□□□□□ -0.95
PDLIM5-204ENST00000380176 STAG2Q8N3U4 1231 aa9.12□□□□□ -0.95
PDLIM5-204ENST00000380176 CERKQ8TCT0 537 aa9.12□□□□□ -0.95
PDLIM5-204ENST00000380176 EPSTI1Q96J88 318 aa9.12□□□□□ -0.95
PDLIM5-204ENST00000380176 CD209Q9NNX6 404 aa9.12□□□□□ -0.95
PDLIM5-204ENST00000380176 SAP30BPQ9UHR5 308 aaKnown RBP9.12□□□□□ -0.95
PDLIM5-204ENST00000380176 BRWD3Q6RI45 1802 aa9.12□□□□□ -0.95
PDLIM5-204ENST00000380176 TRIM75PA6NK02 468 aa9.12□□□□□ -0.95
PDLIM5-204ENST00000380176 USP27XA6NNY8 438 aa9.12□□□□□ -0.95
PDLIM5-204ENST00000380176 DDR1Q08345 913 aa9.12□□□□□ -0.95
PDLIM5-204ENST00000380176 ZNF174Q15697 407 aa9.12□□□□□ -0.95
PDLIM5-204ENST00000380176 MAPKAPK5Q8IW41 473 aa9.12□□□□□ -0.95
PDLIM5-204ENST00000380176 MYRIPQ8NFW9 859 aa9.12□□□□□ -0.95
PDLIM5-204ENST00000380176 RTFDC1Q9BY42 306 aaPredicted RBP9.12□□□□□ -0.95
PDLIM5-204ENST00000380176 FAM13BQ9NYF5 915 aa9.12□□□□□ -0.95
PDLIM5-204ENST00000380176 CLEC11AQ9Y240 323 aa9.12□□□□□ -0.95
PDLIM5-204ENST00000380176 ACTN4O43707 911 aaKnown RBP9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 CCZ1BP86790 482 aa9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 CCZ1P86791 482 aaPredicted RBP9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 POSTNQ15063 836 aa9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 PTPN21Q16825 1174 aa9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 ZNF827Q17R98 1081 aa9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 ZNF579Q8NAF0 562 aaKnown RBP9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 DPF2Q92785 391 aa9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 C16orf45Q96MC5 204 aaPredicted RBP9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 POLLQ9UGP5 575 aa9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 MAN1B1Q9UKM7 699 aa9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 SMTNL1A8MU46 457 aa9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 IKBKBO14920 756 aa9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 TRIM37O94972 964 aa9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 SCG2P13521 617 aa9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 FANCCQ00597 558 aa9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 RASGRP2Q7LDG7 609 aa9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 TRPC5Q9UL62 973 aaPredicted RBP9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 CEP131Q9UPN4 1083 aa9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 SKILP12757 684 aa9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 CASP1P29466 404 aa9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 PPP4CP60510 307 aa9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 ST5P78524 1137 aa9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 SLC35G1Q2M3R5 365 aa9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 HSP90AA4PQ58FG1 418 aa9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 C15orf52Q6ZUT6 534 aaKnown RBP9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 TMC6Q7Z403 805 aa9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 PNMA1Q8ND90 353 aa9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 GPKOWQ92917 476 aaPredicted RBP eCLIP9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 PRIMPOLQ96LW4 560 aa9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 KAT14Q9H8E8 782 aa9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 MKNK2Q9HBH9 465 aa9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 FANCLQ9NW38 375 aa9.11□□□□□ -0.95
PDLIM5-204ENST00000380176 BTDP43251 543 aa9.1□□□□□ -0.95
PDLIM5-204ENST00000380176 SARSP49591 514 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-204ENST00000380176 MYL5Q02045 173 aa9.1□□□□□ -0.95
PDLIM5-204ENST00000380176 PFKFB3Q16875 520 aaPredicted RBP9.1□□□□□ -0.95
PDLIM5-204ENST00000380176 ARMCX5Q6P1M9 558 aa9.1□□□□□ -0.95
PDLIM5-204ENST00000380176 PIK3AP1Q6ZUJ8 805 aa9.1□□□□□ -0.95
PDLIM5-204ENST00000380176 OSBPL5Q9H0X9 879 aaPredicted RBP9.1□□□□□ -0.95
PDLIM5-204ENST00000380176 QTRT2Q9H974 415 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-204ENST00000380176 GGA1Q9UJY5 639 aa9.1□□□□□ -0.95
PDLIM5-204ENST00000380176 MYH1P12882 1939 aa9.1□□□□□ -0.95
PDLIM5-204ENST00000380176 DDX60LQ5H9U9 1706 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-204ENST00000380176 BAG3O95817 575 aa9.1□□□□□ -0.95
PDLIM5-204ENST00000380176 IL1R1P14778 569 aa9.1□□□□□ -0.95
PDLIM5-204ENST00000380176 NLRP5P59047 1200 aa9.1□□□□□ -0.95
PDLIM5-204ENST00000380176 FMR1Q06787 632 aaKnown RBP eCLIP9.1□□□□□ -0.95
PDLIM5-204ENST00000380176 TTC38Q5R3I4 469 aa9.1□□□□□ -0.95
PDLIM5-204ENST00000380176 TYW1BQ6NUM6 668 aa9.1□□□□□ -0.95
PDLIM5-204ENST00000380176 ELOA2Q8IYF1 753 aaPredicted RBP9.1□□□□□ -0.95
PDLIM5-204ENST00000380176 SYMPKQ92797 1274 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-204ENST00000380176 DHX58Q96C10 678 aa9.1□□□□□ -0.95
PDLIM5-204ENST00000380176 RBM17Q96I25 401 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-204ENST00000380176 MED15Q96RN5 788 aa9.1□□□□□ -0.95
PDLIM5-204ENST00000380176 MAD2L2Q9UI95 211 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms