RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 MCOLN1Q9GZU1 580 aa14.06□□□□□ -0.16
PCNA-201ENST00000379143 SAGE1Q9NXZ1 904 aa14.06□□□□□ -0.16
PCNA-201ENST00000379143 AGTPBP1Q9UPW5 1226 aa14.06□□□□□ -0.16
PCNA-201ENST00000379143 SLC45A1Q9Y2W3 748 aa14.06□□□□□ -0.16
PCNA-201ENST00000379143 A0A1W2PRG0 241 aa14.05□□□□□ -0.16
PCNA-201ENST00000379143 B4E1Z4 1266 aa14.05□□□□□ -0.16
PCNA-201ENST00000379143 KDM4AO75164 1064 aa14.05□□□□□ -0.16
PCNA-201ENST00000379143 MCCP23508 829 aa14.05□□□□□ -0.16
PCNA-201ENST00000379143 MOGSQ13724 837 aa14.05□□□□□ -0.16
PCNA-201ENST00000379143 KRT32Q14532 448 aa14.05□□□□□ -0.16
PCNA-201ENST00000379143 TSGA10IPQ3SY00 556 aa14.05□□□□□ -0.16
PCNA-201ENST00000379143 SIAH1Q8IUQ4 282 aa14.05□□□□□ -0.16
PCNA-201ENST00000379143 ACER1Q8TDN7 264 aa14.05□□□□□ -0.16
PCNA-201ENST00000379143 LPAR1Q92633 364 aa14.05□□□□□ -0.16
PCNA-201ENST00000379143 MKL1Q969V6 931 aa14.05□□□□□ -0.16
PCNA-201ENST00000379143 PTPN18Q99952 460 aa14.05□□□□□ -0.16
PCNA-201ENST00000379143 GOPCQ9HD26 462 aa14.05□□□□□ -0.16
PCNA-201ENST00000379143 ZSWIM5Q9P217 1185 aa14.05□□□□□ -0.16
PCNA-201ENST00000379143 CLIP2Q9UDT6 1046 aa14.05□□□□□ -0.16
PCNA-201ENST00000379143 STX8Q9UNK0 236 aa14.05□□□□□ -0.16
PCNA-201ENST00000379143 PDE4DIPQ5VU43 2346 aa14.05□□□□□ -0.16
PCNA-201ENST00000379143 BTBD19C9JJ37 291 aa14.04□□□□□ -0.16
PCNA-201ENST00000379143 IGF2BP3O00425 579 aaKnown RBP eCLIP14.04□□□□□ -0.16
PCNA-201ENST00000379143 HSPA4P34932 840 aa14.04□□□□□ -0.16
PCNA-201ENST00000379143 NOVP48745 357 aa14.04□□□□□ -0.16
PCNA-201ENST00000379143 DGKHQ86XP1 1220 aa14.04□□□□□ -0.16
PCNA-201ENST00000379143 CLEC10AQ8IUN9 316 aa14.04□□□□□ -0.16
PCNA-201ENST00000379143 UBAC1Q9BSL1 405 aa14.04□□□□□ -0.16
PCNA-201ENST00000379143 CFHR5Q9BXR6 569 aa14.04□□□□□ -0.16
PCNA-201ENST00000379143 VCPKMTQ9H867 229 aa14.04□□□□□ -0.16
PCNA-201ENST00000379143 IL17RBQ9NRM6 502 aa14.04□□□□□ -0.16
PCNA-201ENST00000379143 EMILIN3Q9NT22 766 aa14.04□□□□□ -0.16
PCNA-201ENST00000379143 PNMA3Q9UL41 463 aa14.04□□□□□ -0.16
PCNA-201ENST00000379143 PDHXO00330 501 aa14.03□□□□□ -0.16
PCNA-201ENST00000379143 SART3Q15020 963 aaKnown RBP14.03□□□□□ -0.16
PCNA-201ENST00000379143 ZYXQ15942 572 aaKnown RBP14.03□□□□□ -0.16
PCNA-201ENST00000379143 GPAT2Q6NUI2 795 aa14.03□□□□□ -0.16
PCNA-201ENST00000379143 FAM43AQ8N2R8 423 aa14.03□□□□□ -0.16
PCNA-201ENST00000379143 KCNB2Q92953 911 aa14.03□□□□□ -0.16
PCNA-201ENST00000379143 ZSCAN10Q96SZ4 725 aaPredicted RBP14.03□□□□□ -0.16
PCNA-201ENST00000379143 MTA3Q9BTC8 594 aa14.03□□□□□ -0.16
PCNA-201ENST00000379143 USP26Q9BXU7 913 aa14.03□□□□□ -0.16
PCNA-201ENST00000379143 RNF186Q9NXI6 227 aa14.03□□□□□ -0.16
PCNA-201ENST00000379143 MYH4Q9Y623 1939 aa14.03□□□□□ -0.16
PCNA-201ENST00000379143 ERICH2A1L162 156 aa14.02□□□□□ -0.17
PCNA-201ENST00000379143 NMT2O60551 498 aa14.02□□□□□ -0.17
PCNA-201ENST00000379143 TRPA1O75762 1119 aa14.02□□□□□ -0.17
PCNA-201ENST00000379143 HMGB1P09429 215 aaKnown RBP14.02□□□□□ -0.17
PCNA-201ENST00000379143 VCAM1P19320 739 aa14.02□□□□□ -0.17
PCNA-201ENST00000379143 OSBPP22059 807 aa14.02□□□□□ -0.17
PCNA-201ENST00000379143 HOXA7P31268 230 aaPredicted RBP14.02□□□□□ -0.17
PCNA-201ENST00000379143 TAF1CQ15572 869 aaPredicted RBP14.02□□□□□ -0.17
PCNA-201ENST00000379143 C8orf34Q49A92 452 aa14.02□□□□□ -0.17
PCNA-201ENST00000379143 STOX1Q6ZVD7 989 aa14.02□□□□□ -0.17
PCNA-201ENST00000379143 GMCL1P1Q8NEA9 526 aa14.02□□□□□ -0.17
PCNA-201ENST00000379143 PARK7Q99497 189 aaKnown RBP14.02□□□□□ -0.17
PCNA-201ENST00000379143 ZFYVE28Q9HCC9 887 aa14.02□□□□□ -0.17
PCNA-201ENST00000379143 TAF6LQ9Y6J9 622 aa14.02□□□□□ -0.17
PCNA-201ENST00000379143 USP17L15C9J2P7 530 aa14.01□□□□□ -0.17
PCNA-201ENST00000379143 USP17L13C9JLJ4 530 aa14.01□□□□□ -0.17
PCNA-201ENST00000379143 USP17L11C9JVI0 530 aa14.01□□□□□ -0.17
PCNA-201ENST00000379143 USP17L18D6R9N7 530 aa14.01□□□□□ -0.17
PCNA-201ENST00000379143 USP17L22D6RA61 530 aa14.01□□□□□ -0.17
PCNA-201ENST00000379143 USP17L17D6RBQ6 530 aa14.01□□□□□ -0.17
PCNA-201ENST00000379143 USP17L19D6RCP7 530 aa14.01□□□□□ -0.17
PCNA-201ENST00000379143 USP17L20D6RJB6 530 aa14.01□□□□□ -0.17
PCNA-201ENST00000379143 F5H6K3 240 aa14.01□□□□□ -0.17
PCNA-201ENST00000379143 WDR46O15213 610 aaKnown RBP14.01□□□□□ -0.17
PCNA-201ENST00000379143 ABCB7O75027 752 aa14.01□□□□□ -0.17
PCNA-201ENST00000379143 TOP1P11387 765 aaKnown RBP14.01□□□□□ -0.17
PCNA-201ENST00000379143 MCM5P33992 734 aa14.01□□□□□ -0.17
PCNA-201ENST00000379143 KLRC3Q07444 240 aa14.01□□□□□ -0.17
PCNA-201ENST00000379143 USP17L24Q0WX57 530 aa14.01□□□□□ -0.17
PCNA-201ENST00000379143 TREML2Q5T2D2 321 aa14.01□□□□□ -0.17
PCNA-201ENST00000379143 MB21D2Q8IYB1 491 aaPredicted RBP14.01□□□□□ -0.17
PCNA-201ENST00000379143 NEK1Q96PY6 1258 aa14.01□□□□□ -0.17
PCNA-201ENST00000379143 TNKSO95271 1327 aa14.01□□□□□ -0.17
PCNA-201ENST00000379143 RAD21O60216 631 aa14□□□□□ -0.17
PCNA-201ENST00000379143 DSG3P32926 999 aa14□□□□□ -0.17
PCNA-201ENST00000379143 IRX3P78415 501 aaPredicted RBP14□□□□□ -0.17
PCNA-201ENST00000379143 DGKZQ13574 1117 aa14□□□□□ -0.17
PCNA-201ENST00000379143 NOM1Q5C9Z4 860 aaKnown RBP14□□□□□ -0.17
PCNA-201ENST00000379143 CYB5R4Q7L1T6 521 aa14□□□□□ -0.17
PCNA-201ENST00000379143 RASEFQ8IZ41 740 aa14□□□□□ -0.17
PCNA-201ENST00000379143 LRRC47Q8N1G4 583 aaKnown RBP14□□□□□ -0.17
PCNA-201ENST00000379143 GTF3C2Q8WUA4 911 aaPredicted RBP14□□□□□ -0.17
PCNA-201ENST00000379143 ANKS1AQ92625 1134 aa14□□□□□ -0.17
PCNA-201ENST00000379143 TMEM47Q9BQJ4 181 aa14□□□□□ -0.17
PCNA-201ENST00000379143 ZKSCAN3Q9BRR0 538 aa14□□□□□ -0.17
PCNA-201ENST00000379143 KAT14Q9H8E8 782 aa14□□□□□ -0.17
PCNA-201ENST00000379143 SNX14Q9Y5W7 946 aa14□□□□□ -0.17
PCNA-201ENST00000379143 IFIT3O14879 490 aaKnown RBP13.99□□□□□ -0.17
PCNA-201ENST00000379143 TLR2O60603 784 aa13.99□□□□□ -0.17
PCNA-201ENST00000379143 NDUFB10O96000 172 aa13.99□□□□□ -0.17
PCNA-201ENST00000379143 PSMA5P28066 241 aa13.99□□□□□ -0.17
PCNA-201ENST00000379143 CRHR2Q13324 411 aa13.99□□□□□ -0.17
PCNA-201ENST00000379143 IFIT1BQ5T764 474 aaKnown RBP13.99□□□□□ -0.17
PCNA-201ENST00000379143 RCSD1Q6JBY9 416 aa13.99□□□□□ -0.17
PCNA-201ENST00000379143 CATSPERGQ6ZRH7 1159 aa13.99□□□□□ -0.17
PCNA-201ENST00000379143 SPICE1Q8N0Z3 855 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms