RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 DDX60LQ5H9U9 1706 aaKnown RBP22.35■■□□□ 1.17
SSU72-204ENST00000378726 POLD1P28340 1107 aa22.34■■□□□ 1.17
SSU72-204ENST00000378726 CACNB3P54284 484 aa22.34■■□□□ 1.17
SSU72-204ENST00000378726 GRM4Q14833 912 aa22.34■■□□□ 1.17
SSU72-204ENST00000378726 SHISA4Q96DD7 197 aa22.34■■□□□ 1.17
SSU72-204ENST00000378726 CEP95Q96GE4 821 aa22.34■■□□□ 1.17
SSU72-204ENST00000378726 HLA-DOAP06340 250 aa22.34■■□□□ 1.17
SSU72-204ENST00000378726 SLC39A14Q15043 492 aa22.34■■□□□ 1.17
SSU72-204ENST00000378726 SWAP70Q9UH65 585 aa22.34■■□□□ 1.17
SSU72-204ENST00000378726 MAD2L2Q9UI95 211 aa22.34■■□□□ 1.17
SSU72-204ENST00000378726 ECM29Q5VYK3 1845 aa22.33■■□□□ 1.17
SSU72-204ENST00000378726 GNAQP50148 359 aa22.33■■□□□ 1.17
SSU72-204ENST00000378726 TCP10Q12799 353 aa22.33■■□□□ 1.17
SSU72-204ENST00000378726 NR5A1Q13285 461 aa22.33■■□□□ 1.17
SSU72-204ENST00000378726 KLHL34Q8N239 644 aa22.33■■□□□ 1.17
SSU72-204ENST00000378726 OXER1Q8TDS5 423 aa22.33■■□□□ 1.17
SSU72-204ENST00000378726 MTFR1LQ9H019 292 aa22.33■■□□□ 1.17
SSU72-204ENST00000378726 TNMDQ9H2S6 317 aa22.33■■□□□ 1.17
SSU72-204ENST00000378726 SPTLC3Q9NUV7 552 aa22.33■■□□□ 1.17
SSU72-204ENST00000378726 FOCADQ5VW36 1801 aa22.33■■□□□ 1.16
SSU72-204ENST00000378726 PHF20Q9BVI0 1012 aa22.33■■□□□ 1.16
SSU72-204ENST00000378726 IDI2Q9BXS1 227 aa22.33■■□□□ 1.16
SSU72-204ENST00000378726 GOLPH3LQ9H4A5 285 aa22.33■■□□□ 1.16
SSU72-204ENST00000378726 MAP3K11Q16584 847 aa22.32■■□□□ 1.16
SSU72-204ENST00000378726 CCDC73Q6ZRK6 1079 aa22.32■■□□□ 1.16
SSU72-204ENST00000378726 FSIP1Q8NA03 581 aa22.32■■□□□ 1.16
SSU72-204ENST00000378726 CLSTN2Q9H4D0 955 aa22.32■■□□□ 1.16
SSU72-204ENST00000378726 ADAMTSL1Q8N6G6 1762 aa22.32■■□□□ 1.16
SSU72-204ENST00000378726 RAD17O75943 681 aa22.31■■□□□ 1.16
SSU72-204ENST00000378726 CCDC192P0DO97 292 aa22.31■■□□□ 1.16
SSU72-204ENST00000378726 TOP1P11387 765 aaKnown RBP22.31■■□□□ 1.16
SSU72-204ENST00000378726 AKR1B1P15121 316 aa22.31■■□□□ 1.16
SSU72-204ENST00000378726 NOVP48745 357 aa22.31■■□□□ 1.16
SSU72-204ENST00000378726 CFAP100Q494V2 611 aa22.31■■□□□ 1.16
SSU72-204ENST00000378726 ARID3AQ99856 593 aa22.31■■□□□ 1.16
SSU72-204ENST00000378726 KCNF1Q9H3M0 494 aa22.31■■□□□ 1.16
SSU72-204ENST00000378726 FAM198AQ9UFP1 575 aa22.31■■□□□ 1.16
SSU72-204ENST00000378726 A0A1W2PQ27 194 aa22.31■■□□□ 1.16
SSU72-204ENST00000378726 A0A1W2PQ64 194 aa22.31■■□□□ 1.16
SSU72-204ENST00000378726 A0A1W2PQD8 194 aa22.31■■□□□ 1.16
SSU72-204ENST00000378726 SCG2P13521 617 aa22.31■■□□□ 1.16
SSU72-204ENST00000378726 MARCKSP29966 332 aaPredicted RBP22.31■■□□□ 1.16
SSU72-204ENST00000378726 SNW1Q13573 536 aaKnown RBP22.31■■□□□ 1.16
SSU72-204ENST00000378726 PFKFB3Q16875 520 aaPredicted RBP22.31■■□□□ 1.16
SSU72-204ENST00000378726 SOGA3Q5TF21 947 aa22.31■■□□□ 1.16
SSU72-204ENST00000378726 TSC1Q92574 1164 aa22.31■■□□□ 1.16
SSU72-204ENST00000378726 PRIMPOLQ96LW4 560 aa22.31■■□□□ 1.16
SSU72-204ENST00000378726 VPS33BQ9H267 617 aa22.31■■□□□ 1.16
SSU72-204ENST00000378726 DHX36Q9H2U1 1008 aaKnown RBP22.31■■□□□ 1.16
SSU72-204ENST00000378726 PALM3A6NDB9 673 aaPredicted RBP22.3■■□□□ 1.16
SSU72-204ENST00000378726 VEGFAP15692 232 aaPredicted RBP22.3■■□□□ 1.16
SSU72-204ENST00000378726 TOB1P50616 345 aaPredicted RBP22.3■■□□□ 1.16
SSU72-204ENST00000378726 PTPAQ15257 358 aa22.3■■□□□ 1.16
SSU72-204ENST00000378726 RSBN1LQ6PCB5 846 aaPredicted RBP22.3■■□□□ 1.16
SSU72-204ENST00000378726 PRMT6Q96LA8 375 aaPredicted RBP22.3■■□□□ 1.16
SSU72-204ENST00000378726 TDRD3Q9H7E2 651 aaKnown RBP22.3■■□□□ 1.16
SSU72-204ENST00000378726 MTMR4Q9NYA4 1195 aa22.3■■□□□ 1.16
SSU72-204ENST00000378726 SHMT1P34896 483 aa22.3■■□□□ 1.16
SSU72-204ENST00000378726 KRT2P35908 639 aa22.3■■□□□ 1.16
SSU72-204ENST00000378726 RILPL1Q5EBL4 403 aa22.3■■□□□ 1.16
SSU72-204ENST00000378726 MTERF4Q7Z6M4 381 aaKnown RBP22.3■■□□□ 1.16
SSU72-204ENST00000378726 CKAP2LQ8IYA6 745 aa22.3■■□□□ 1.16
SSU72-204ENST00000378726 SPC24Q8NBT2 197 aa22.3■■□□□ 1.16
SSU72-204ENST00000378726 ENGASEQ8NFI3 743 aa22.3■■□□□ 1.16
SSU72-204ENST00000378726 MRPS27Q92552 414 aaKnown RBP22.3■■□□□ 1.16
SSU72-204ENST00000378726 CABP5Q9NP86 173 aa22.3■■□□□ 1.16
SSU72-204ENST00000378726 PPP1R1BQ9UD71 204 aaPredicted RBP22.3■■□□□ 1.16
SSU72-204ENST00000378726 BAZ2BQ9UIF8 2168 aaKnown RBP22.29■■□□□ 1.16
SSU72-204ENST00000378726 PSMD14O00487 310 aa22.29■■□□□ 1.16
SSU72-204ENST00000378726 PPP6R2O75170 966 aa22.29■■□□□ 1.16
SSU72-204ENST00000378726 VIL1P09327 827 aaKnown RBP22.29■■□□□ 1.16
SSU72-204ENST00000378726 FAM160A1Q05DH4 1040 aa22.29■■□□□ 1.16
SSU72-204ENST00000378726 R3HDM1Q15032 1099 aaKnown RBP22.29■■□□□ 1.16
SSU72-204ENST00000378726 ZSCAN29Q8IWY8 852 aaPredicted RBP22.29■■□□□ 1.16
SSU72-204ENST00000378726 EHD4Q9H223 541 aa22.29■■□□□ 1.16
SSU72-204ENST00000378726 PYCARDQ9ULZ3 195 aa22.29■■□□□ 1.16
SSU72-204ENST00000378726 A0A1B0GVL5 298 aa22.29■■□□□ 1.16
SSU72-204ENST00000378726 DDTLA6NHG4 134 aaPredicted RBP22.29■■□□□ 1.16
SSU72-204ENST00000378726 NPM3O75607 178 aaKnown RBP22.29■■□□□ 1.16
SSU72-204ENST00000378726 GOLGA8HP0CJ92 632 aa22.29■■□□□ 1.16
SSU72-204ENST00000378726 SLURP2P0DP57 97 aa22.29■■□□□ 1.16
SSU72-204ENST00000378726 DALRD3Q5D0E6 543 aaKnown RBP22.29■■□□□ 1.16
SSU72-204ENST00000378726 AXDND1Q5T1B0 1012 aaPredicted RBP22.29■■□□□ 1.16
SSU72-204ENST00000378726 LZTS2Q9BRK4 669 aa22.29■■□□□ 1.16
SSU72-204ENST00000378726 PI4KBQ9UBF8 816 aa22.29■■□□□ 1.16
SSU72-204ENST00000378726 MYH6P13533 1939 aa22.28■■□□□ 1.16
SSU72-204ENST00000378726 MYO3BQ8WXR4 1341 aa22.28■■□□□ 1.16
SSU72-204ENST00000378726 KLRF2D3W0D1 207 aa22.28■■□□□ 1.16
SSU72-204ENST00000378726 JMYQ8N9B5 988 aa22.28■■□□□ 1.16
SSU72-204ENST00000378726 BRMS1Q9HCU9 246 aa22.28■■□□□ 1.16
SSU72-204ENST00000378726 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.28■■□□□ 1.16
SSU72-204ENST00000378726 PARP1P09874 1014 aaKnown RBP22.27■■□□□ 1.16
SSU72-204ENST00000378726 USP17L2Q6R6M4 530 aa22.27■■□□□ 1.16
SSU72-204ENST00000378726 KIAA1524Q8TCG1 905 aa22.27■■□□□ 1.16
SSU72-204ENST00000378726 MRVI1Q9Y6F6 885 aa22.27■■□□□ 1.16
SSU72-204ENST00000378726 PLIN4Q96Q06 1357 aa22.27■■□□□ 1.16
SSU72-204ENST00000378726 IGKV6D-41A0A0C4DH26 115 aa22.27■■□□□ 1.16
SSU72-204ENST00000378726 CYTH3O43739 400 aa22.27■■□□□ 1.16
SSU72-204ENST00000378726 NLRP5P59047 1200 aa22.27■■□□□ 1.16
SSU72-204ENST00000378726 SLC35G1Q2M3R5 365 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms