RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 CETN1Q12798 172 aa15.98■□□□□ 0.15
SHROOM1-203ENST00000378679 PTGDRQ13258 359 aa15.98■□□□□ 0.15
SHROOM1-203ENST00000378679 PNOCQ13519 176 aa15.98■□□□□ 0.15
SHROOM1-203ENST00000378679 TNFAIP1Q13829 316 aa15.98■□□□□ 0.15
SHROOM1-203ENST00000378679 VPS36Q86VN1 386 aa15.98■□□□□ 0.15
SHROOM1-203ENST00000378679 MLKLQ8NB16 471 aa15.98■□□□□ 0.15
SHROOM1-203ENST00000378679 CCDC94Q9BW85 323 aaPredicted RBP15.98■□□□□ 0.15
SHROOM1-203ENST00000378679 RPAP1Q9BWH6 1393 aaPredicted RBP15.98■□□□□ 0.15
SHROOM1-203ENST00000378679 CNTNAP4Q9C0A0 1308 aa15.98■□□□□ 0.15
SHROOM1-203ENST00000378679 CHMP2AO43633 222 aa15.98■□□□□ 0.15
SHROOM1-203ENST00000378679 CACNB3P54284 484 aa15.98■□□□□ 0.15
SHROOM1-203ENST00000378679 RESTQ13127 1097 aa15.98■□□□□ 0.15
SHROOM1-203ENST00000378679 CALCRLQ16602 461 aa15.98■□□□□ 0.15
SHROOM1-203ENST00000378679 ABCB5Q2M3G0 1257 aa15.98■□□□□ 0.15
SHROOM1-203ENST00000378679 HS1BP3Q53T59 392 aa15.98■□□□□ 0.15
SHROOM1-203ENST00000378679 MMRN2Q9H8L6 949 aa15.98■□□□□ 0.15
SHROOM1-203ENST00000378679 NFE2L3Q9Y4A8 694 aa15.98■□□□□ 0.15
SHROOM1-203ENST00000378679 AKR1B10O60218 316 aa15.97■□□□□ 0.15
SHROOM1-203ENST00000378679 CCDC93Q567U6 631 aa15.97■□□□□ 0.15
SHROOM1-203ENST00000378679 CCDC174Q6PII3 467 aa15.97■□□□□ 0.15
SHROOM1-203ENST00000378679 USP17L2Q6R6M4 530 aa15.97■□□□□ 0.15
SHROOM1-203ENST00000378679 NSMFQ6X4W1 530 aa15.97■□□□□ 0.15
SHROOM1-203ENST00000378679 SLC44A5Q8NCS7 719 aa15.97■□□□□ 0.15
SHROOM1-203ENST00000378679 RASGRP4Q8TDF6 673 aa15.97■□□□□ 0.15
SHROOM1-203ENST00000378679 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.97■□□□□ 0.15
SHROOM1-203ENST00000378679 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.97■□□□□ 0.15
SHROOM1-203ENST00000378679 CDK8P49336 464 aa15.97■□□□□ 0.15
SHROOM1-203ENST00000378679 NLRP12P59046 1061 aa15.97■□□□□ 0.15
SHROOM1-203ENST00000378679 GNG11P61952 73 aa15.97■□□□□ 0.15
SHROOM1-203ENST00000378679 PSTPIP2Q9H939 334 aa15.97■□□□□ 0.15
SHROOM1-203ENST00000378679 HOMER2Q9NSB8 354 aa15.97■□□□□ 0.15
SHROOM1-203ENST00000378679 DHX37Q8IY37 1157 aaKnown RBP15.97■□□□□ 0.15
SHROOM1-203ENST00000378679 SPICE1Q8N0Z3 855 aa15.97■□□□□ 0.15
SHROOM1-203ENST00000378679 FOXP1Q9H334 677 aaPredicted RBP15.97■□□□□ 0.15
SHROOM1-203ENST00000378679 ZDHHC9Q9Y397 364 aa15.97■□□□□ 0.15
SHROOM1-203ENST00000378679 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.97■□□□□ 0.15
SHROOM1-203ENST00000378679 USP8P40818 1118 aa15.97■□□□□ 0.15
SHROOM1-203ENST00000378679 DNA2P51530 1060 aa15.97■□□□□ 0.15
SHROOM1-203ENST00000378679 LINC00301Q8NCQ3 95 aa15.97■□□□□ 0.15
SHROOM1-203ENST00000378679 CHURC1Q8WUH1 139 aa15.97■□□□□ 0.15
SHROOM1-203ENST00000378679 SPAG5Q96R06 1193 aa15.97■□□□□ 0.15
SHROOM1-203ENST00000378679 ACBD3Q9H3P7 528 aa15.97■□□□□ 0.15
SHROOM1-203ENST00000378679 BICDL2A1A5D9 508 aa15.96■□□□□ 0.15
SHROOM1-203ENST00000378679 IBSPP21815 317 aaPredicted RBP15.96■□□□□ 0.15
SHROOM1-203ENST00000378679 BLZF1Q9H2G9 400 aa15.96■□□□□ 0.15
SHROOM1-203ENST00000378679 POLR3EQ9NVU0 708 aa15.96■□□□□ 0.15
SHROOM1-203ENST00000378679 USO1O60763 962 aaKnown RBP15.96■□□□□ 0.15
SHROOM1-203ENST00000378679 FAM13AO94988 1023 aa15.96■□□□□ 0.15
SHROOM1-203ENST00000378679 CASP7P55210 303 aa15.96■□□□□ 0.14
SHROOM1-203ENST00000378679 ARHGAP27Q6ZUM4 889 aa15.96■□□□□ 0.14
SHROOM1-203ENST00000378679 PODNQ7Z5L7 613 aa15.96■□□□□ 0.14
SHROOM1-203ENST00000378679 CABP7Q86V35 215 aa15.96■□□□□ 0.14
SHROOM1-203ENST00000378679 PCDHA1Q9Y5I3 950 aa15.96■□□□□ 0.14
SHROOM1-203ENST00000378679 SALL3Q9BXA9 1300 aa15.95■□□□□ 0.14
SHROOM1-203ENST00000378679 TMEM232C9JQI7 657 aa15.95■□□□□ 0.14
SHROOM1-203ENST00000378679 GDF11O95390 407 aa15.95■□□□□ 0.14
SHROOM1-203ENST00000378679 TTLL1O95922 423 aa15.95■□□□□ 0.14
SHROOM1-203ENST00000378679 UBXN1Q04323 297 aa15.95■□□□□ 0.14
SHROOM1-203ENST00000378679 DGKHQ86XP1 1220 aa15.95■□□□□ 0.14
SHROOM1-203ENST00000378679 SWAP70Q9UH65 585 aa15.95■□□□□ 0.14
SHROOM1-203ENST00000378679 A0A1W2PQ27 194 aa15.95■□□□□ 0.14
SHROOM1-203ENST00000378679 A0A1W2PQ64 194 aa15.95■□□□□ 0.14
SHROOM1-203ENST00000378679 A0A1W2PQD8 194 aa15.95■□□□□ 0.14
SHROOM1-203ENST00000378679 ECM2O94769 699 aaPredicted RBP15.95■□□□□ 0.14
SHROOM1-203ENST00000378679 CASQ1P31415 396 aa15.95■□□□□ 0.14
SHROOM1-203ENST00000378679 FANCCQ00597 558 aa15.95■□□□□ 0.14
SHROOM1-203ENST00000378679 DYMQ7RTS9 669 aa15.95■□□□□ 0.14
SHROOM1-203ENST00000378679 TRMT44Q8IYL2 757 aaKnown RBP15.95■□□□□ 0.14
SHROOM1-203ENST00000378679 GOPCQ9HD26 462 aa15.95■□□□□ 0.14
SHROOM1-203ENST00000378679 PLEKHA8P1O95397 391 aa15.95■□□□□ 0.14
SHROOM1-203ENST00000378679 MMP1P03956 469 aa15.95■□□□□ 0.14
SHROOM1-203ENST00000378679 HS2ST1Q7LGA3 356 aa15.95■□□□□ 0.14
SHROOM1-203ENST00000378679 CCDC65Q8IXS2 484 aa15.95■□□□□ 0.14
SHROOM1-203ENST00000378679 TAF4BQ92750 862 aa15.95■□□□□ 0.14
SHROOM1-203ENST00000378679 NSUN4Q96CB9 384 aaKnown RBP15.95■□□□□ 0.14
SHROOM1-203ENST00000378679 PRIMPOLQ96LW4 560 aa15.95■□□□□ 0.14
SHROOM1-203ENST00000378679 VPS16Q9H269 839 aa15.95■□□□□ 0.14
SHROOM1-203ENST00000378679 TMOD4Q9NZQ9 345 aa15.95■□□□□ 0.14
SHROOM1-203ENST00000378679 CTNND2Q9UQB3 1225 aa15.95■□□□□ 0.14
SHROOM1-203ENST00000378679 PLEKHG2Q9H7P9 1386 aa15.94■□□□□ 0.14
SHROOM1-203ENST00000378679 MYCNP04198 464 aaPredicted RBP15.94■□□□□ 0.14
SHROOM1-203ENST00000378679 SLC16A2P36021 539 aa15.94■□□□□ 0.14
SHROOM1-203ENST00000378679 ZNF827Q17R98 1081 aa15.94■□□□□ 0.14
SHROOM1-203ENST00000378679 GPATCH4Q5T3I0 446 aaKnown RBP15.94■□□□□ 0.14
SHROOM1-203ENST00000378679 NCAPH2Q6IBW4 605 aa15.94■□□□□ 0.14
SHROOM1-203ENST00000378679 NEK8Q86SG6 692 aa15.94■□□□□ 0.14
SHROOM1-203ENST00000378679 ENAHQ8N8S7 591 aaPredicted RBP15.94■□□□□ 0.14
SHROOM1-203ENST00000378679 SLC4A9Q96Q91 983 aa15.94■□□□□ 0.14
SHROOM1-203ENST00000378679 KANSL2Q9H9L4 492 aa15.94■□□□□ 0.14
SHROOM1-203ENST00000378679 PI4KBQ9UBF8 816 aa15.94■□□□□ 0.14
SHROOM1-203ENST00000378679 BCL9O00512 1426 aa15.94■□□□□ 0.14
SHROOM1-203ENST00000378679 BACH1O14867 736 aa15.94■□□□□ 0.14
SHROOM1-203ENST00000378679 NMT2O60551 498 aa15.94■□□□□ 0.14
SHROOM1-203ENST00000378679 RAD51AP2Q09MP3 1159 aa15.94■□□□□ 0.14
SHROOM1-203ENST00000378679 HAUS3Q68CZ6 603 aa15.94■□□□□ 0.14
SHROOM1-203ENST00000378679 TRAF5O00463 557 aa15.94■□□□□ 0.14
SHROOM1-203ENST00000378679 ZBTB7AO95365 584 aa15.94■□□□□ 0.14
SHROOM1-203ENST00000378679 ZNF75DP51815 510 aa15.94■□□□□ 0.14
SHROOM1-203ENST00000378679 CTR9Q6PD62 1173 aa15.94■□□□□ 0.14
SHROOM1-203ENST00000378679 KCTD1Q719H9 257 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms