RNA–Protein interactions for RNA: ENST00000378383.5

FNDC3A-201, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 2 BASIC

Gene FNDC3A, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-201ENST00000378383 SLIT2O94813 1529 aa11.14□□□□□ -0.63
FNDC3A-201ENST00000378383 BMP15O95972 392 aa11.14□□□□□ -0.63
FNDC3A-201ENST00000378383 TPM1P09493 284 aa11.14□□□□□ -0.63
FNDC3A-201ENST00000378383 FGRP09769 529 aa11.14□□□□□ -0.63
FNDC3A-201ENST00000378383 ELF2Q15723 593 aa11.14□□□□□ -0.63
FNDC3A-201ENST00000378383 TMEM164Q5U3C3 297 aa11.14□□□□□ -0.63
FNDC3A-201ENST00000378383 NPAS4Q8IUM7 802 aa11.14□□□□□ -0.63
FNDC3A-201ENST00000378383 NUTM2AQ8IVF1 878 aaPredicted RBP11.14□□□□□ -0.63
FNDC3A-201ENST00000378383 CCDC34Q96HJ3 373 aa11.14□□□□□ -0.63
FNDC3A-201ENST00000378383 ARMT1Q9H993 441 aa11.14□□□□□ -0.63
FNDC3A-201ENST00000378383 PRDM10Q9NQV6 1147 aa11.14□□□□□ -0.63
FNDC3A-201ENST00000378383 AATFQ9NY61 560 aaKnown RBP eCLIP11.14□□□□□ -0.63
FNDC3A-201ENST00000378383 UBAP1LF5GYI3 381 aa11.13□□□□□ -0.63
FNDC3A-201ENST00000378383 ACTN4O43707 911 aaKnown RBP11.13□□□□□ -0.63
FNDC3A-201ENST00000378383 GUCY1A2P33402 732 aa11.13□□□□□ -0.63
FNDC3A-201ENST00000378383 PDE4BQ07343 736 aa11.13□□□□□ -0.63
FNDC3A-201ENST00000378383 SEC23AQ15436 765 aa11.13□□□□□ -0.63
FNDC3A-201ENST00000378383 CCDC152Q4G0S7 254 aa11.13□□□□□ -0.63
FNDC3A-201ENST00000378383 SPECC1LQ69YQ0 1117 aa11.13□□□□□ -0.63
FNDC3A-201ENST00000378383 SPIRE2Q8WWL2 714 aa11.13□□□□□ -0.63
FNDC3A-201ENST00000378383 SMARCE1Q969G3 411 aa11.13□□□□□ -0.63
FNDC3A-201ENST00000378383 MYL10Q9BUA6 226 aa11.13□□□□□ -0.63
FNDC3A-201ENST00000378383 UTP14AQ9BVJ6 771 aaKnown RBP11.13□□□□□ -0.63
FNDC3A-201ENST00000378383 DNAI1Q9UI46 699 aa11.13□□□□□ -0.63
FNDC3A-201ENST00000378383 SLC4A4Q9Y6R1 1079 aa11.13□□□□□ -0.63
FNDC3A-201ENST00000378383 CICQ96RK0 1608 aaPredicted RBP11.13□□□□□ -0.63
FNDC3A-201ENST00000378383 ZNF804BA4D1E1 1349 aa11.13□□□□□ -0.63
FNDC3A-201ENST00000378383 ZNF335Q9H4Z2 1342 aaPredicted RBP11.13□□□□□ -0.63
FNDC3A-201ENST00000378383 ATP8B1O43520 1251 aa11.13□□□□□ -0.63
FNDC3A-201ENST00000378383 XBP1P17861 261 aa11.13□□□□□ -0.63
FNDC3A-201ENST00000378383 VAMP1P23763 118 aa11.13□□□□□ -0.63
FNDC3A-201ENST00000378383 MARSP56192 900 aaKnown RBP11.13□□□□□ -0.63
FNDC3A-201ENST00000378383 ISM2Q6H9L7 571 aa11.13□□□□□ -0.63
FNDC3A-201ENST00000378383 SH3RF1Q7Z6J0 888 aa11.13□□□□□ -0.63
FNDC3A-201ENST00000378383 ZNF654Q8IZM8 581 aa11.13□□□□□ -0.63
FNDC3A-201ENST00000378383 LCORLQ8N3X6 602 aa11.13□□□□□ -0.63
FNDC3A-201ENST00000378383 PRR7Q8TB68 274 aa11.13□□□□□ -0.63
FNDC3A-201ENST00000378383 INCENPQ9NQS7 918 aa11.13□□□□□ -0.63
FNDC3A-201ENST00000378383 ZMIZ1Q9ULJ6 1067 aa11.13□□□□□ -0.63
FNDC3A-201ENST00000378383 BCL9LQ86UU0 1499 aa11.12□□□□□ -0.63
FNDC3A-201ENST00000378383 RREB1Q92766 1687 aa11.12□□□□□ -0.63
FNDC3A-201ENST00000378383 ANKRD33BA6NCL7 494 aa11.12□□□□□ -0.63
FNDC3A-201ENST00000378383 SOWAHDA6NJG2 315 aa11.12□□□□□ -0.63
FNDC3A-201ENST00000378383 EFCAB8A8MWE9 144 aa11.12□□□□□ -0.63
FNDC3A-201ENST00000378383 POLR2DO15514 142 aaKnown RBP11.12□□□□□ -0.63
FNDC3A-201ENST00000378383 PRPF3O43395 683 aaKnown RBP11.12□□□□□ -0.63
FNDC3A-201ENST00000378383 RECKO95980 971 aa11.12□□□□□ -0.63
FNDC3A-201ENST00000378383 TDO2P48775 406 aa11.12□□□□□ -0.63
FNDC3A-201ENST00000378383 PLCD1P51178 756 aa11.12□□□□□ -0.63
FNDC3A-201ENST00000378383 TAGLNQ01995 201 aaKnown RBP11.12□□□□□ -0.63
FNDC3A-201ENST00000378383 PPARAQ07869 468 aa11.12□□□□□ -0.63
FNDC3A-201ENST00000378383 BMS1Q14692 1282 aaKnown RBP11.12□□□□□ -0.63
FNDC3A-201ENST00000378383 NR1I3Q14994 352 aa11.12□□□□□ -0.63
FNDC3A-201ENST00000378383 SUSD4Q5VX71 490 aa11.12□□□□□ -0.63
FNDC3A-201ENST00000378383 HOMER1Q86YM7 354 aa11.12□□□□□ -0.63
FNDC3A-201ENST00000378383 TC2NQ8N9U0 490 aa11.12□□□□□ -0.63
FNDC3A-201ENST00000378383 STK32AQ8WU08 396 aa11.12□□□□□ -0.63
FNDC3A-201ENST00000378383 ESR2Q92731 530 aa11.12□□□□□ -0.63
FNDC3A-201ENST00000378383 BAG1Q99933 345 aaPredicted RBP11.12□□□□□ -0.63
FNDC3A-201ENST00000378383 PPP2R2CQ9Y2T4 447 aa11.12□□□□□ -0.63
FNDC3A-201ENST00000378383 LAMB2P55268 1798 aa11.12□□□□□ -0.63
FNDC3A-201ENST00000378383 COL14A1Q05707 1796 aaKnown RBP11.12□□□□□ -0.63
FNDC3A-201ENST00000378383 A0A1B0GTH6 734 aa11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 VWA3AA6NCI4 1184 aa11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 TMEM232C9JQI7 657 aa11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 UBE2Q2LH0YL09 131 aa11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 EXOC5O00471 708 aa11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 IGHMBP2P38935 993 aaKnown RBP11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 FUT2Q10981 343 aa11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 ERCC6LQ2NKX8 1250 aa11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 TUSC1Q2TAM9 212 aa11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 HELBQ8NG08 1087 aaPredicted RBP11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 FERMT2Q96AC1 680 aa11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 CDC5LQ99459 802 aaKnown RBP11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 PHF20Q9BVI0 1012 aa11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 RBM28Q9NW13 759 aaKnown RBP11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 BTG4Q9NY30 223 aa11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 SERTAD1Q9UHV2 236 aa11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 NFE2L3Q9Y4A8 694 aa11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 PCDHB6Q9Y5E3 794 aa11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 PARP3Q9Y6F1 533 aa11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 SPTLC1O15269 473 aa11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 FOXN1O15353 648 aa11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 PRKAB2O43741 272 aa11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 TADA3O75528 432 aa11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 SLFN14P0C7P3 912 aa11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 CALM1P0DP23 149 aa11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 CALM2P0DP24 149 aa11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 CALM3P0DP25 149 aa11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 FMR1Q06787 632 aaKnown RBP eCLIP11.11□□□□□ -0.635e-8■■■□□ 16
FNDC3A-201ENST00000378383 INTS5Q6P9B9 1019 aaKnown RBP11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 PANX2Q96RD6 677 aa11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 MED15Q96RN5 788 aa11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 UBAC1Q9BSL1 405 aa11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 CDCA7Q9BWT1 371 aaPredicted RBP11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 BRIP1Q9BX63 1249 aa11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 NAA15Q9BXJ9 866 aaKnown RBP11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 ZNF446Q9NWS9 450 aa11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 KCNJ14Q9UNX9 436 aa11.11□□□□□ -0.63
FNDC3A-201ENST00000378383 TRIM75PA6NK02 468 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms