RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 PHACTR2O75167 634 aa15.7■□□□□ 0.1
SF1-205ENST00000377394 ERCC5P28715 1186 aaPredicted RBP15.7■□□□□ 0.1
SF1-205ENST00000377394 MMP14P50281 582 aa15.7■□□□□ 0.1
SF1-205ENST00000377394 ADKP55263 362 aaKnown RBP15.7■□□□□ 0.1
SF1-205ENST00000377394 SKIDA1Q1XH10 827 aa15.7■□□□□ 0.1
SF1-205ENST00000377394 NUTM2AQ8IVF1 878 aaPredicted RBP15.7■□□□□ 0.1
SF1-205ENST00000377394 AATFQ9NY61 560 aaKnown RBP eCLIP15.7■□□□□ 0.11e-6■■□□□ 14.4
SF1-205ENST00000377394 NTSR2O95665 410 aa15.69■□□□□ 0.1
SF1-205ENST00000377394 PPP2R5BQ15173 497 aa15.69■□□□□ 0.1
SF1-205ENST00000377394 TOGARAM2Q6ZUX3 1019 aa15.69■□□□□ 0.1
SF1-205ENST00000377394 ESR2Q92731 530 aa15.69■□□□□ 0.1
SF1-205ENST00000377394 BRMS1Q9HCU9 246 aa15.69■□□□□ 0.1
SF1-205ENST00000377394 CCDC87Q9NVE4 849 aa15.69■□□□□ 0.1
SF1-205ENST00000377394 VPS54Q9P1Q0 977 aa15.69■□□□□ 0.1
SF1-205ENST00000377394 IQSEC3Q9UPP2 1182 aaPredicted RBP15.69■□□□□ 0.1
SF1-205ENST00000377394 COL4A1P02462 1669 aa15.69■□□□□ 0.1
SF1-205ENST00000377394 IVLP07476 585 aa15.69■□□□□ 0.1
SF1-205ENST00000377394 PARP10Q53GL7 1025 aa15.69■□□□□ 0.1
SF1-205ENST00000377394 EP400NLQ6ZTU2 488 aa15.69■□□□□ 0.1
SF1-205ENST00000377394 APTXQ7Z2E3 356 aaKnown RBP15.69■□□□□ 0.1
SF1-205ENST00000377394 ENAHQ8N8S7 591 aaPredicted RBP15.69■□□□□ 0.1
SF1-205ENST00000377394 RABGGTAQ92696 567 aa15.69■□□□□ 0.1
SF1-205ENST00000377394 RIOK1Q9BRS2 568 aaKnown RBP15.69■□□□□ 0.1
SF1-205ENST00000377394 PHF20Q9BVI0 1012 aa15.69■□□□□ 0.1
SF1-205ENST00000377394 ZNF804BA4D1E1 1349 aa15.69■□□□□ 0.1
SF1-205ENST00000377394 A0A1B0GTH6 734 aa15.69■□□□□ 0.1
SF1-205ENST00000377394 TRIM75PA6NK02 468 aa15.69■□□□□ 0.1
SF1-205ENST00000377394 SH3RF1Q7Z6J0 888 aa15.69■□□□□ 0.1
SF1-205ENST00000377394 EPSTI1Q96J88 318 aa15.69■□□□□ 0.1
SF1-205ENST00000377394 RAI14Q9P0K7 980 aa15.69■□□□□ 0.1
SF1-205ENST00000377394 MAGEB6P1A0A0J9YX57 407 aa15.68■□□□□ 0.1
SF1-205ENST00000377394 CRKLP46109 303 aaKnown RBP15.68■□□□□ 0.1
SF1-205ENST00000377394 IRX2Q9BZI1 471 aaPredicted RBP15.68■□□□□ 0.1
SF1-205ENST00000377394 PHLPP1O60346 1717 aa15.68■□□□□ 0.1
SF1-205ENST00000377394 WNT7AO00755 349 aa15.68■□□□□ 0.1
SF1-205ENST00000377394 PRPF3O43395 683 aaKnown RBP15.68■□□□□ 0.1
SF1-205ENST00000377394 TXLNAP40222 546 aa15.68■□□□□ 0.1
SF1-205ENST00000377394 ZSCAN10Q96SZ4 725 aaPredicted RBP15.68■□□□□ 0.1
SF1-205ENST00000377394 hCG_1642624A0A1W2PR95 340 aa15.67■□□□□ 0.1
SF1-205ENST00000377394 GOLGA6L9A6NEM1 432 aa15.67■□□□□ 0.1
SF1-205ENST00000377394 PRDM1O75626 825 aa15.67■□□□□ 0.1
SF1-205ENST00000377394 MYCNP04198 464 aaPredicted RBP15.67■□□□□ 0.1
SF1-205ENST00000377394 CD44P16070 742 aaKnown RBP15.67■□□□□ 0.1
SF1-205ENST00000377394 KARSQ15046 597 aaKnown RBP15.67■□□□□ 0.1
SF1-205ENST00000377394 LRRC31Q6UY01 552 aa15.67■□□□□ 0.1
SF1-205ENST00000377394 GOLGA1Q92805 767 aa15.67■□□□□ 0.1
SF1-205ENST00000377394 ABCF2Q9UG63 623 aa15.67■□□□□ 0.1
SF1-205ENST00000377394 COL1A1P02452 1464 aaPredicted RBP15.67■□□□□ 0.1
SF1-205ENST00000377394 CICQ96RK0 1608 aaPredicted RBP15.67■□□□□ 0.1
SF1-205ENST00000377394 PLEKHA8P1O95397 391 aa15.67■□□□□ 0.1
SF1-205ENST00000377394 KRT2P35908 639 aa15.67■□□□□ 0.1
SF1-205ENST00000377394 CT47A1Q5JQC4 288 aaPredicted RBP15.67■□□□□ 0.1
SF1-205ENST00000377394 KIFC2Q96AC6 838 aa15.67■□□□□ 0.1
SF1-205ENST00000377394 PAGE5Q96GU1 130 aa15.67■□□□□ 0.1
SF1-205ENST00000377394 PNKPQ96T60 521 aa15.67■□□□□ 0.1
SF1-205ENST00000377394 PUF60Q9UHX1 559 aaKnown RBP15.67■□□□□ 0.1
SF1-205ENST00000377394 STRCQ7RTU9 1775 aa15.67■□□□□ 0.1
SF1-205ENST00000377394 CYP2D7A0A087X1C5 515 aa15.66■□□□□ 0.1
SF1-205ENST00000377394 CCDC151A5D8V7 595 aa15.66■□□□□ 0.1
SF1-205ENST00000377394 WTIPA6NIX2 430 aaPredicted RBP15.66■□□□□ 0.1
SF1-205ENST00000377394 TFRCP02786 760 aaKnown RBP15.66■□□□□ 0.1
SF1-205ENST00000377394 GYG1P46976 350 aa15.66■□□□□ 0.1
SF1-205ENST00000377394 CORO7P57737 925 aa15.66■□□□□ 0.1
SF1-205ENST00000377394 AKAP17AQ02040 695 aaKnown RBP15.66■□□□□ 0.1
SF1-205ENST00000377394 CUL4BQ13620 913 aa15.66■□□□□ 0.1
SF1-205ENST00000377394 BEND6Q5SZJ8 279 aaPredicted RBP15.66■□□□□ 0.1
SF1-205ENST00000377394 DESI2Q9BSY9 194 aa15.66■□□□□ 0.1
SF1-205ENST00000377394 NIP7Q9Y221 180 aaKnown RBP eCLIP15.66■□□□□ 0.1
SF1-205ENST00000377394 V9GY48 417 aaPredicted RBP15.66■□□□□ 0.1
SF1-205ENST00000377394 MYH6P13533 1939 aa15.66■□□□□ 0.1
SF1-205ENST00000377394 DOT1LQ8TEK3 1739 aa15.66■□□□□ 0.1
SF1-205ENST00000377394 COL14A1Q05707 1796 aaKnown RBP15.66■□□□□ 0.1
SF1-205ENST00000377394 DUOX1Q9NRD9 1551 aa15.66■□□□□ 0.1
SF1-205ENST00000377394 TEX33O43247 280 aa15.66■□□□□ 0.1
SF1-205ENST00000377394 FGRP09769 529 aa15.66■□□□□ 0.1
SF1-205ENST00000377394 XBP1P17861 261 aa15.66■□□□□ 0.1
SF1-205ENST00000377394 CASP1P29466 404 aa15.66■□□□□ 0.1
SF1-205ENST00000377394 TROAPQ12815 778 aa15.66■□□□□ 0.1
SF1-205ENST00000377394 NPY5RQ15761 445 aa15.66■□□□□ 0.1
SF1-205ENST00000377394 SYMPKQ92797 1274 aaKnown RBP15.66■□□□□ 0.1
SF1-205ENST00000377394 TNFRSF25Q93038 417 aa15.66■□□□□ 0.1
SF1-205ENST00000377394 ATP6V1AP38606 617 aa15.65■□□□□ 0.1
SF1-205ENST00000377394 AFMP43652 599 aa15.65■□□□□ 0.1
SF1-205ENST00000377394 DYNLL1P63167 89 aaKnown RBP15.65■□□□□ 0.1
SF1-205ENST00000377394 SPATA1Q5VX52 437 aa15.65■□□□□ 0.1
SF1-205ENST00000377394 DEF6Q9H4E7 631 aa15.65■□□□□ 0.1
SF1-205ENST00000377394 ANKZF1Q9H8Y5 726 aa15.65■□□□□ 0.1
SF1-205ENST00000377394 CACNA1SQ13698 1873 aa15.65■□□□□ 0.1
SF1-205ENST00000377394 DPYDQ12882 1025 aa15.65■□□□□ 0.1
SF1-205ENST00000377394 ZNF384Q8TF68 577 aa15.65■□□□□ 0.1
SF1-205ENST00000377394 LAMB2P55268 1798 aa15.65■□□□□ 0.1
SF1-205ENST00000377394 PBX1P40424 430 aa15.65■□□□□ 0.1
SF1-205ENST00000377394 ITPK1Q13572 414 aa15.65■□□□□ 0.1
SF1-205ENST00000377394 MTF1Q14872 753 aa15.65■□□□□ 0.1
SF1-205ENST00000377394 IFIT1BQ5T764 474 aaKnown RBP15.65■□□□□ 0.1
SF1-205ENST00000377394 CDKAL1Q5VV42 579 aa15.65■□□□□ 0.1
SF1-205ENST00000377394 CATIPQ7Z7H3 387 aa15.65■□□□□ 0.1
SF1-205ENST00000377394 PPM1EQ8WY54 764 aa15.65■□□□□ 0.1
SF1-205ENST00000377394 FERMT2Q96AC1 680 aa15.65■□□□□ 0.1
SF1-205ENST00000377394 PANX2Q96RD6 677 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms