RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 BMP6P22004 513 aa19.53■□□□□ 0.72
TRIM27-201ENST00000377194 MDM2Q00987 491 aaPredicted RBP19.53■□□□□ 0.72
TRIM27-201ENST00000377194 USP49Q70CQ1 688 aa19.53■□□□□ 0.72
TRIM27-201ENST00000377194 IRS2Q9Y4H2 1338 aa19.53■□□□□ 0.72
TRIM27-201ENST00000377194 ETF1P62495 437 aaKnown RBP19.53■□□□□ 0.72
TRIM27-201ENST00000377194 CATIPQ7Z7H3 387 aa19.53■□□□□ 0.72
TRIM27-201ENST00000377194 TBC1D8O95759 1140 aa19.52■□□□□ 0.72
TRIM27-201ENST00000377194 SMC1AQ14683 1233 aaKnown RBP19.52■□□□□ 0.72
TRIM27-201ENST00000377194 PPP2R5BQ15173 497 aa19.52■□□□□ 0.72
TRIM27-201ENST00000377194 MUM1L1Q5H9M0 696 aa19.52■□□□□ 0.72
TRIM27-201ENST00000377194 EP400Q96L91 3159 aa19.52■□□□□ 0.72
TRIM27-201ENST00000377194 PTPN21Q16825 1174 aa19.52■□□□□ 0.72
TRIM27-201ENST00000377194 AEBP2Q6ZN18 517 aaPredicted RBP19.52■□□□□ 0.72
TRIM27-201ENST00000377194 USP21Q9UK80 565 aa19.52■□□□□ 0.72
TRIM27-201ENST00000377194 PDS5AQ29RF7 1337 aaKnown RBP19.52■□□□□ 0.71
TRIM27-201ENST00000377194 WNT7AO00755 349 aa19.51■□□□□ 0.71
TRIM27-201ENST00000377194 PRPF3O43395 683 aaKnown RBP19.51■□□□□ 0.71
TRIM27-201ENST00000377194 TADA3O75528 432 aa19.51■□□□□ 0.71
TRIM27-201ENST00000377194 LMAN1P49257 510 aa19.51■□□□□ 0.71
TRIM27-201ENST00000377194 AKAP17AQ02040 695 aaKnown RBP19.51■□□□□ 0.71
TRIM27-201ENST00000377194 NOM1Q5C9Z4 860 aaKnown RBP19.51■□□□□ 0.71
TRIM27-201ENST00000377194 PHF20Q9BVI0 1012 aa19.51■□□□□ 0.71
TRIM27-201ENST00000377194 CRNKL1Q9BZJ0 848 aaKnown RBP19.51■□□□□ 0.71
TRIM27-201ENST00000377194 MYH6P13533 1939 aa19.51■□□□□ 0.71
TRIM27-201ENST00000377194 COL24A1Q17RW2 1714 aa19.51■□□□□ 0.71
TRIM27-201ENST00000377194 UBAP1LF5GYI3 381 aa19.51■□□□□ 0.71
TRIM27-201ENST00000377194 IKBKBO14920 756 aa19.51■□□□□ 0.71
TRIM27-201ENST00000377194 POLR2DO15514 142 aaKnown RBP19.51■□□□□ 0.71
TRIM27-201ENST00000377194 KCNJ6P48051 423 aa19.51■□□□□ 0.71
TRIM27-201ENST00000377194 GOLGA8FQ08AF8 430 aa19.51■□□□□ 0.71
TRIM27-201ENST00000377194 GOLGA8DPQ0D2H9 430 aa19.51■□□□□ 0.71
TRIM27-201ENST00000377194 NRDCO43847 1150 aa19.5■□□□□ 0.71
TRIM27-201ENST00000377194 NFIXQ14938 502 aa19.5■□□□□ 0.71
TRIM27-201ENST00000377194 PCP11498 1178 aaKnown RBP19.5■□□□□ 0.71
TRIM27-201ENST00000377194 VEGFAP15692 232 aaPredicted RBP19.5■□□□□ 0.71
TRIM27-201ENST00000377194 PDE4BQ07343 736 aa19.5■□□□□ 0.71
TRIM27-201ENST00000377194 SRBD1Q8N5C6 995 aaKnown RBP19.5■□□□□ 0.71
TRIM27-201ENST00000377194 PDILTQ8N807 584 aa19.5■□□□□ 0.71
TRIM27-201ENST00000377194 SERTAD1Q9UHV2 236 aa19.5■□□□□ 0.71
TRIM27-201ENST00000377194 SRPRBQ9Y5M8 271 aaKnown RBP19.5■□□□□ 0.71
TRIM27-201ENST00000377194 ORC4O43929 436 aa19.49■□□□□ 0.71
TRIM27-201ENST00000377194 USP17L8P0C7I0 530 aa19.49■□□□□ 0.71
TRIM27-201ENST00000377194 PRR29P0C7W0 189 aa19.49■□□□□ 0.71
TRIM27-201ENST00000377194 GPS2Q13227 327 aa19.49■□□□□ 0.71
TRIM27-201ENST00000377194 NPY5RQ15761 445 aa19.49■□□□□ 0.71
TRIM27-201ENST00000377194 TRIM65Q6PJ69 517 aa19.49■□□□□ 0.71
TRIM27-201ENST00000377194 GRAMD1CQ8IYS0 662 aa19.49■□□□□ 0.71
TRIM27-201ENST00000377194 CSRNP2Q9H175 543 aa19.49■□□□□ 0.71
TRIM27-201ENST00000377194 ATP8A2Q9NTI2 1148 aa19.49■□□□□ 0.71
TRIM27-201ENST00000377194 PHLPP2Q6ZVD8 1323 aa19.49■□□□□ 0.71
TRIM27-201ENST00000377194 TUBB4AP04350 444 aa19.49■□□□□ 0.71
TRIM27-201ENST00000377194 FANCCQ00597 558 aa19.49■□□□□ 0.71
TRIM27-201ENST00000377194 GRIK5Q16478 980 aa19.49■□□□□ 0.71
TRIM27-201ENST00000377194 TMTC3Q6ZXV5 915 aa19.49■□□□□ 0.71
TRIM27-201ENST00000377194 ANKIB1Q9P2G1 1089 aa19.49■□□□□ 0.71
TRIM27-201ENST00000377194 RFC4P35249 363 aa19.48■□□□□ 0.71
TRIM27-201ENST00000377194 NOP2P46087 812 aaKnown RBP19.48■□□□□ 0.71
TRIM27-201ENST00000377194 CC2D1AQ6P1N0 951 aaPredicted RBP19.48■□□□□ 0.71
TRIM27-201ENST00000377194 REXO1L1PQ8IX06 675 aa19.48■□□□□ 0.71
TRIM27-201ENST00000377194 DPF2Q92785 391 aa19.48■□□□□ 0.71
TRIM27-201ENST00000377194 GPR101Q96P66 508 aaPredicted RBP19.48■□□□□ 0.71
TRIM27-201ENST00000377194 TNRC6CQ9HCJ0 1690 aaKnown RBP19.48■□□□□ 0.71
TRIM27-201ENST00000377194 UBXN6Q9BZV1 441 aa19.48■□□□□ 0.71
TRIM27-201ENST00000377194 RBM28Q9NW13 759 aaKnown RBP19.48■□□□□ 0.71
TRIM27-201ENST00000377194 MCM9Q9NXL9 1143 aa19.48■□□□□ 0.71
TRIM27-201ENST00000377194 KRT2P35908 639 aa19.48■□□□□ 0.71
TRIM27-201ENST00000377194 MYL5Q02045 173 aa19.48■□□□□ 0.71
TRIM27-201ENST00000377194 RCSD1Q6JBY9 416 aa19.48■□□□□ 0.71
TRIM27-201ENST00000377194 FAM196AQ6ZSG2 479 aa19.48■□□□□ 0.71
TRIM27-201ENST00000377194 ZNF579Q8NAF0 562 aaKnown RBP19.48■□□□□ 0.71
TRIM27-201ENST00000377194 ADAMTS3O15072 1205 aa19.47■□□□□ 0.71
TRIM27-201ENST00000377194 DDAH1O94760 285 aa19.47■□□□□ 0.71
TRIM27-201ENST00000377194 XBP1P17861 261 aa19.47■□□□□ 0.71
TRIM27-201ENST00000377194 POSTNQ15063 836 aa19.47■□□□□ 0.71
TRIM27-201ENST00000377194 TRAPPC3LQ5T215 181 aa19.47■□□□□ 0.71
TRIM27-201ENST00000377194 DZIP1Q86YF9 867 aaKnown RBP19.47■□□□□ 0.71
TRIM27-201ENST00000377194 EFCC1Q9HA90 598 aa19.47■□□□□ 0.71
TRIM27-201ENST00000377194 CNTNAP5Q8WYK1 1306 aa19.47■□□□□ 0.71
TRIM27-201ENST00000377194 CALM1P0DP23 149 aa19.47■□□□□ 0.71
TRIM27-201ENST00000377194 CALM2P0DP24 149 aa19.47■□□□□ 0.71
TRIM27-201ENST00000377194 CALM3P0DP25 149 aa19.47■□□□□ 0.71
TRIM27-201ENST00000377194 CASQ1P31415 396 aa19.47■□□□□ 0.71
TRIM27-201ENST00000377194 DIXDC1Q155Q3 683 aa19.47■□□□□ 0.71
TRIM27-201ENST00000377194 SBK1Q52WX2 424 aa19.47■□□□□ 0.71
TRIM27-201ENST00000377194 FANCLQ9NW38 375 aa19.47■□□□□ 0.71
TRIM27-201ENST00000377194 MKRN1Q9UHC7 482 aaKnown RBP19.47■□□□□ 0.71
TRIM27-201ENST00000377194 MAN1B1Q9UKM7 699 aa19.47■□□□□ 0.71
TRIM27-201ENST00000377194 A0A087X0B3 334 aa19.46■□□□□ 0.71
TRIM27-201ENST00000377194 TRIM75PA6NK02 468 aa19.46■□□□□ 0.71
TRIM27-201ENST00000377194 ZNF827Q17R98 1081 aa19.46■□□□□ 0.71
TRIM27-201ENST00000377194 ELOA2Q8IYF1 753 aaPredicted RBP19.46■□□□□ 0.71
TRIM27-201ENST00000377194 TNFRSF25Q93038 417 aa19.46■□□□□ 0.71
TRIM27-201ENST00000377194 EPSTI1Q96J88 318 aa19.46■□□□□ 0.71
TRIM27-201ENST00000377194 LRRC4BQ9NT99 713 aa19.46■□□□□ 0.71
TRIM27-201ENST00000377194 ARPP21Q9UBL0 812 aaPredicted RBP19.46■□□□□ 0.71
TRIM27-201ENST00000377194 RRP15Q9Y3B9 282 aaKnown RBP19.46■□□□□ 0.71
TRIM27-201ENST00000377194 TSPY2A6NKD2 308 aa19.46■□□□□ 0.71
TRIM27-201ENST00000377194 ACTN4O43707 911 aaKnown RBP19.46■□□□□ 0.71
TRIM27-201ENST00000377194 SARSP49591 514 aaKnown RBP19.46■□□□□ 0.71
TRIM27-201ENST00000377194 DYNLL2Q96FJ2 89 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms