RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 FMN2Q9NZ56 1722 aa12.6□□□□□ -0.39
HDAC6-203ENST00000376619 DCAF8L1A6NGE4 600 aa12.59□□□□□ -0.39
HDAC6-203ENST00000376619 LRRC8AQ8IWT6 810 aa12.59□□□□□ -0.39
HDAC6-203ENST00000376619 STAG2Q8N3U4 1231 aa12.59□□□□□ -0.39
HDAC6-203ENST00000376619 WDR66Q8TBY9 1149 aa12.59□□□□□ -0.39
HDAC6-203ENST00000376619 CSF1RP07333 972 aa12.59□□□□□ -0.39
HDAC6-203ENST00000376619 ZNF569Q5MCW4 686 aa12.59□□□□□ -0.39
HDAC6-203ENST00000376619 BAG1Q99933 345 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-203ENST00000376619 JADE2Q9NQC1 790 aa12.59□□□□□ -0.39
HDAC6-203ENST00000376619 ZNF215Q9UL58 517 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-203ENST00000376619 ATF5Q9Y2D1 282 aaPredicted RBP12.59□□□□□ -0.39
HDAC6-203ENST00000376619 COL15A1P39059 1388 aa12.59□□□□□ -0.39
HDAC6-203ENST00000376619 USP42Q9H9J4 1324 aaKnown RBP12.59□□□□□ -0.39
HDAC6-203ENST00000376619 DDX39AO00148 427 aaKnown RBP12.59□□□□□ -0.39
HDAC6-203ENST00000376619 ZSCAN12O43309 604 aa12.59□□□□□ -0.39
HDAC6-203ENST00000376619 CAMTA2O94983 1202 aa12.59□□□□□ -0.39
HDAC6-203ENST00000376619 PDE4DQ08499 809 aa12.59□□□□□ -0.39
HDAC6-203ENST00000376619 TMEM266Q2M3C6 531 aa12.59□□□□□ -0.39
HDAC6-203ENST00000376619 CLEC17AQ6ZS10 378 aa12.59□□□□□ -0.39
HDAC6-203ENST00000376619 CARD6Q9BX69 1037 aa12.59□□□□□ -0.39
HDAC6-203ENST00000376619 LRP6O75581 1613 aa12.59□□□□□ -0.39
HDAC6-203ENST00000376619 UTYO14607 1347 aa12.59□□□□□ -0.39
HDAC6-203ENST00000376619 CAVIN2O95810 425 aa12.59□□□□□ -0.39
HDAC6-203ENST00000376619 GDF11O95390 407 aa12.58□□□□□ -0.4
HDAC6-203ENST00000376619 PRR29P0C7W0 189 aa12.58□□□□□ -0.4
HDAC6-203ENST00000376619 INTS5Q6P9B9 1019 aaKnown RBP12.58□□□□□ -0.4
HDAC6-203ENST00000376619 CEP89Q96ST8 783 aa12.58□□□□□ -0.4
HDAC6-203ENST00000376619 C6orf50Q9HD87 102 aa12.58□□□□□ -0.4
HDAC6-203ENST00000376619 SCG2P13521 617 aa12.58□□□□□ -0.4
HDAC6-203ENST00000376619 ERCC6LQ2NKX8 1250 aa12.58□□□□□ -0.4
HDAC6-203ENST00000376619 AXDND1Q5T1B0 1012 aaPredicted RBP12.58□□□□□ -0.4
HDAC6-203ENST00000376619 BARGINQ6ZT62 677 aa12.58□□□□□ -0.4
HDAC6-203ENST00000376619 CRACR2AQ9BSW2 395 aa12.58□□□□□ -0.4
HDAC6-203ENST00000376619 MACROD2A1Z1Q3 448 aa12.58□□□□□ -0.4
HDAC6-203ENST00000376619 AKR1B10O60218 316 aa12.58□□□□□ -0.4
HDAC6-203ENST00000376619 TRIM28Q13263 835 aaKnown RBP12.58□□□□□ -0.4
HDAC6-203ENST00000376619 PRIMPOLQ96LW4 560 aa12.58□□□□□ -0.4
HDAC6-203ENST00000376619 SLF1Q9BQI6 1058 aa12.58□□□□□ -0.4
HDAC6-203ENST00000376619 HPS5Q9UPZ3 1129 aa12.58□□□□□ -0.4
HDAC6-203ENST00000376619 TCP10L2B9ZVM9 353 aa12.57□□□□□ -0.4
HDAC6-203ENST00000376619 SLF2Q8IX21 1173 aa12.57□□□□□ -0.4
HDAC6-203ENST00000376619 ZNF34Q8IZ26 560 aa12.57□□□□□ -0.4
HDAC6-203ENST00000376619 KIAA1524Q8TCG1 905 aa12.57□□□□□ -0.4
HDAC6-203ENST00000376619 GJA10Q969M2 543 aa12.57□□□□□ -0.4
HDAC6-203ENST00000376619 RBM17Q96I25 401 aaKnown RBP12.57□□□□□ -0.4
HDAC6-203ENST00000376619 ZBTB7AO95365 584 aa12.57□□□□□ -0.4
HDAC6-203ENST00000376619 MMP1P03956 469 aa12.57□□□□□ -0.4
HDAC6-203ENST00000376619 IFNAR1P17181 557 aa12.57□□□□□ -0.4
HDAC6-203ENST00000376619 SLC1A4P43007 532 aa12.57□□□□□ -0.4
HDAC6-203ENST00000376619 CCDC181Q5TID7 509 aa12.57□□□□□ -0.4
HDAC6-203ENST00000376619 KANK3Q6NY19 840 aa12.57□□□□□ -0.4
HDAC6-203ENST00000376619 SHC4Q6S5L8 630 aa12.57□□□□□ -0.4
HDAC6-203ENST00000376619 TMCO3Q6UWJ1 677 aa12.57□□□□□ -0.4
HDAC6-203ENST00000376619 DCP1AQ9NPI6 582 aaPredicted RBP12.57□□□□□ -0.4
HDAC6-203ENST00000376619 ZNF500O60304 480 aaPredicted RBP12.57□□□□□ -0.4
HDAC6-203ENST00000376619 CALML3P27482 149 aa12.57□□□□□ -0.4
HDAC6-203ENST00000376619 ANKRD13CQ8N6S4 541 aa12.57□□□□□ -0.4
HDAC6-203ENST00000376619 CCDC150Q8NCX0 1101 aa12.57□□□□□ -0.4
HDAC6-203ENST00000376619 SMARCC2Q8TAQ2 1214 aa12.57□□□□□ -0.4
HDAC6-203ENST00000376619 SLC39A2Q9NP94 309 aa12.57□□□□□ -0.4
HDAC6-203ENST00000376619 BSDC1Q9NW68 430 aaPredicted RBP12.57□□□□□ -0.4
HDAC6-203ENST00000376619 PSMA7O14818 248 aa12.56□□□□□ -0.4
HDAC6-203ENST00000376619 CYP4A11Q02928 519 aa12.56□□□□□ -0.4
HDAC6-203ENST00000376619 LRRC41Q15345 812 aa12.56□□□□□ -0.4
HDAC6-203ENST00000376619 HSP90B2PQ58FF3 399 aa12.56□□□□□ -0.4
HDAC6-203ENST00000376619 CT47A1Q5JQC4 288 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-203ENST00000376619 OGFOD1Q8N543 542 aa12.56□□□□□ -0.4
HDAC6-203ENST00000376619 PIGSQ96S52 555 aa12.56□□□□□ -0.4
HDAC6-203ENST00000376619 SRRTQ9BXP5 876 aaKnown RBP12.56□□□□□ -0.4
HDAC6-203ENST00000376619 EPC1Q9H2F5 836 aa12.56□□□□□ -0.4
HDAC6-203ENST00000376619 POLR3EQ9NVU0 708 aa12.56□□□□□ -0.4
HDAC6-203ENST00000376619 FBXO3Q9UK99 471 aa12.56□□□□□ -0.4
HDAC6-203ENST00000376619 KRT9P35527 623 aa12.56□□□□□ -0.4
HDAC6-203ENST00000376619 CTR9Q6PD62 1173 aa12.56□□□□□ -0.4
HDAC6-203ENST00000376619 BLIDQ8IZY5 108 aa12.56□□□□□ -0.4
HDAC6-203ENST00000376619 FMR1NBQ8N0W7 255 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-203ENST00000376619 IGDCC4Q8TDY8 1250 aa12.56□□□□□ -0.4
HDAC6-203ENST00000376619 DPF2Q92785 391 aa12.56□□□□□ -0.4
HDAC6-203ENST00000376619 MAP7D2Q96T17 732 aa12.56□□□□□ -0.4
HDAC6-203ENST00000376619 FAM207AQ9NSI2 230 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-203ENST00000376619 CFBP00751 764 aa12.56□□□□□ -0.4
HDAC6-203ENST00000376619 TXNRD1Q16881 649 aa12.56□□□□□ -0.4
HDAC6-203ENST00000376619 CCDC148Q8NFR7 591 aa12.56□□□□□ -0.4
HDAC6-203ENST00000376619 NKX2-3Q8TAU0 364 aa12.56□□□□□ -0.4
HDAC6-203ENST00000376619 PDLIM2Q96JY6 352 aa12.56□□□□□ -0.4
HDAC6-203ENST00000376619 KIF1AQ12756 1690 aa12.56□□□□□ -0.4
HDAC6-203ENST00000376619 RAD17O75943 681 aa12.55□□□□□ -0.4
HDAC6-203ENST00000376619 FMNL1O95466 1100 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-203ENST00000376619 TERF1P54274 439 aa12.55□□□□□ -0.4
HDAC6-203ENST00000376619 TBC1D8BQ0IIM8 1120 aa12.55□□□□□ -0.4
HDAC6-203ENST00000376619 UBE2SQ16763 222 aa12.55□□□□□ -0.4
HDAC6-203ENST00000376619 CSGALNACT2Q8N6G5 542 aa12.55□□□□□ -0.4
HDAC6-203ENST00000376619 ZMYND15Q9H091 742 aa12.55□□□□□ -0.4
HDAC6-203ENST00000376619 KCNF1Q9H3M0 494 aa12.55□□□□□ -0.4
HDAC6-203ENST00000376619 GJA3Q9Y6H8 435 aa12.55□□□□□ -0.4
HDAC6-203ENST00000376619 SYNRGQ9UMZ2 1314 aa12.55□□□□□ -0.4
HDAC6-203ENST00000376619 GNAQP50148 359 aa12.55□□□□□ -0.4
HDAC6-203ENST00000376619 NKX1-1Q15270 411 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-203ENST00000376619 CCDC174Q6PII3 467 aa12.55□□□□□ -0.4
HDAC6-203ENST00000376619 RDH13Q8NBN7 331 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms