RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 CHGBP05060 677 aa18.08■□□□□ 0.48
CLCN6-204ENST00000376491 BMP8BP34820 402 aa18.08■□□□□ 0.48
CLCN6-204ENST00000376491 BOLA2Q9H3K6 86 aa18.08■□□□□ 0.48
CLCN6-204ENST00000376491 PAG1Q9NWQ8 432 aa18.08■□□□□ 0.48
CLCN6-204ENST00000376491 GLRX3O76003 335 aaKnown RBP18.07■□□□□ 0.48
CLCN6-204ENST00000376491 HOXC6P09630 235 aa18.07■□□□□ 0.48
CLCN6-204ENST00000376491 ADD2P35612 726 aa18.07■□□□□ 0.48
CLCN6-204ENST00000376491 GRB14Q14449 540 aa18.07■□□□□ 0.48
CLCN6-204ENST00000376491 SIAH1Q8IUQ4 282 aa18.07■□□□□ 0.48
CLCN6-204ENST00000376491 PARP14Q460N5 1801 aa18.07■□□□□ 0.48
CLCN6-204ENST00000376491 A0A0G2JMZ2 1700 aa18.06■□□□□ 0.48
CLCN6-204ENST00000376491 IGHA2P01877 340 aa18.06■□□□□ 0.48
CLCN6-204ENST00000376491 ATP5JP18859 108 aa18.06■□□□□ 0.48
CLCN6-204ENST00000376491 CLEC10AQ8IUN9 316 aa18.06■□□□□ 0.48
CLCN6-204ENST00000376491 MBD4O95243 580 aa18.05■□□□□ 0.48
CLCN6-204ENST00000376491 AKR1B1P15121 316 aa18.05■□□□□ 0.48
CLCN6-204ENST00000376491 MAGEA10P43363 369 aaPredicted RBP18.05■□□□□ 0.48
CLCN6-204ENST00000376491 COG2Q14746 738 aa18.05■□□□□ 0.48
CLCN6-204ENST00000376491 LRRC26Q2I0M4 334 aa18.05■□□□□ 0.48
CLCN6-204ENST00000376491 MFSD14CQ5VZR4 134 aa18.05■□□□□ 0.48
CLCN6-204ENST00000376491 TMEM179Q6ZVK1 233 aa18.05■□□□□ 0.48
CLCN6-204ENST00000376491 HAUS7Q99871 368 aa18.05■□□□□ 0.48
CLCN6-204ENST00000376491 MOV10L1Q9BXT6 1211 aaKnown RBP18.05■□□□□ 0.48
CLCN6-204ENST00000376491 SWAP70Q9UH65 585 aa18.05■□□□□ 0.48
CLCN6-204ENST00000376491 IVNS1ABPQ9Y6Y0 642 aa18.05■□□□□ 0.48
CLCN6-204ENST00000376491 ZNFX1Q9P2E3 1918 aaKnown RBP18.05■□□□□ 0.48
CLCN6-204ENST00000376491 ZNF236Q9UL36 1845 aa18.05■□□□□ 0.48
CLCN6-204ENST00000376491 CYP2D7A0A087X1C5 515 aa18.04■□□□□ 0.48
CLCN6-204ENST00000376491 CYP2C19P33261 490 aa18.04■□□□□ 0.48
CLCN6-204ENST00000376491 ATP2B2Q01814 1243 aa18.04■□□□□ 0.48
CLCN6-204ENST00000376491 TRPV1Q8NER1 839 aa18.04■□□□□ 0.48
CLCN6-204ENST00000376491 TANGO6Q9C0B7 1094 aa18.04■□□□□ 0.48
CLCN6-204ENST00000376491 ATP8A2Q9NTI2 1148 aa18.04■□□□□ 0.48
CLCN6-204ENST00000376491 HOXC10Q9NYD6 342 aa18.04■□□□□ 0.48
CLCN6-204ENST00000376491 COL11A1P12107 1806 aaPredicted RBP18.03■□□□□ 0.48
CLCN6-204ENST00000376491 DSG3P32926 999 aa18.03■□□□□ 0.48
CLCN6-204ENST00000376491 C12orf60Q5U649 245 aa18.03■□□□□ 0.48
CLCN6-204ENST00000376491 SPATC1LQ9H0A9 340 aa18.03■□□□□ 0.48
CLCN6-204ENST00000376491 DDX20Q9UHI6 824 aaKnown RBP18.03■□□□□ 0.48
CLCN6-204ENST00000376491 TMX2Q9Y320 296 aa18.03■□□□□ 0.48
CLCN6-204ENST00000376491 USP17L12C9JPN9 530 aa18.02■□□□□ 0.48
CLCN6-204ENST00000376491 USP17L21D6R901 530 aa18.02■□□□□ 0.48
CLCN6-204ENST00000376491 CYBAP13498 195 aa18.02■□□□□ 0.48
CLCN6-204ENST00000376491 ERCC3P19447 782 aa18.02■□□□□ 0.48
CLCN6-204ENST00000376491 ADORA2AP29274 412 aa18.02■□□□□ 0.48
CLCN6-204ENST00000376491 CNGA1P29973 690 aa18.02■□□□□ 0.48
CLCN6-204ENST00000376491 CDK8P49336 464 aa18.02■□□□□ 0.48
CLCN6-204ENST00000376491 ICA1Q05084 483 aa18.02■□□□□ 0.48
CLCN6-204ENST00000376491 UBE3CQ15386 1083 aa18.02■□□□□ 0.48
CLCN6-204ENST00000376491 C20orf194Q5TEA3 1177 aa18.02■□□□□ 0.48
CLCN6-204ENST00000376491 SPICE1Q8N0Z3 855 aa18.02■□□□□ 0.48
CLCN6-204ENST00000376491 SHCBP1Q8NEM2 672 aa18.02■□□□□ 0.48
CLCN6-204ENST00000376491 RCAN3Q9UKA8 241 aa18.02■□□□□ 0.48
CLCN6-204ENST00000376491 SMARCA5O60264 1052 aaPredicted RBP18.01■□□□□ 0.47
CLCN6-204ENST00000376491 COBLO75128 1261 aa18.01■□□□□ 0.47
CLCN6-204ENST00000376491 DPP9Q86TI2 863 aa18.01■□□□□ 0.47
CLCN6-204ENST00000376491 LPAR1Q92633 364 aa18.01■□□□□ 0.47
CLCN6-204ENST00000376491 ATG4CQ96DT6 458 aa18.01■□□□□ 0.47
CLCN6-204ENST00000376491 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.01■□□□□ 0.471e-6■■■■■ 31.5
CLCN6-204ENST00000376491 PUS7LQ9H0K6 701 aaKnown RBP18.01■□□□□ 0.47
CLCN6-204ENST00000376491 VCPKMTQ9H867 229 aa18.01■□□□□ 0.47
CLCN6-204ENST00000376491 ARHGEF10LQ9HCE6 1279 aa18.01■□□□□ 0.47
CLCN6-204ENST00000376491 SMCHD1A6NHR9 2005 aa18.01■□□□□ 0.47
CLCN6-204ENST00000376491 STRNO43815 780 aa18■□□□□ 0.47
CLCN6-204ENST00000376491 MSCO60682 206 aa18■□□□□ 0.47
CLCN6-204ENST00000376491 FLOT1O75955 427 aa18■□□□□ 0.47
CLCN6-204ENST00000376491 OLFML2BQ68BL8 750 aa18■□□□□ 0.47
CLCN6-204ENST00000376491 C16orf86Q6ZW13 317 aa18■□□□□ 0.47
CLCN6-204ENST00000376491 TDHQ8IZJ6 230 aa18■□□□□ 0.47
CLCN6-204ENST00000376491 CCDC17Q96LX7 622 aa18■□□□□ 0.47
CLCN6-204ENST00000376491 UBE2OQ9C0C9 1292 aaKnown RBP18■□□□□ 0.47
CLCN6-204ENST00000376491 SENP6Q9GZR1 1112 aaPredicted RBP18■□□□□ 0.47
CLCN6-204ENST00000376491 PLS1Q14651 629 aa17.99■□□□□ 0.47
CLCN6-204ENST00000376491 LRIT3Q3SXY7 679 aa17.99■□□□□ 0.47
CLCN6-204ENST00000376491 CTR9Q6PD62 1173 aa17.99■□□□□ 0.47
CLCN6-204ENST00000376491 MB21D1Q8N884 522 aa17.99■□□□□ 0.47
CLCN6-204ENST00000376491 LRRCC1Q9C099 1032 aa17.99■□□□□ 0.47
CLCN6-204ENST00000376491 CHMP4BQ9H444 224 aaKnown RBP17.99■□□□□ 0.47
CLCN6-204ENST00000376491 SLC4A4Q9Y6R1 1079 aa17.99■□□□□ 0.47
CLCN6-204ENST00000376491 GREB1LQ9C091 1923 aaPredicted RBP17.98■□□□□ 0.47
CLCN6-204ENST00000376491 WDR46O15213 610 aaKnown RBP17.98■□□□□ 0.47
CLCN6-204ENST00000376491 EEF2P13639 858 aaKnown RBP17.98■□□□□ 0.47
CLCN6-204ENST00000376491 MDM2Q00987 491 aaPredicted RBP17.98■□□□□ 0.47
CLCN6-204ENST00000376491 ANO1Q5XXA6 986 aa17.98■□□□□ 0.47
CLCN6-204ENST00000376491 NCAPG2Q86XI2 1143 aa17.98■□□□□ 0.47
CLCN6-204ENST00000376491 ADAMTS5Q9UNA0 930 aa17.98■□□□□ 0.47
CLCN6-204ENST00000376491 DNAH12Q6ZR08 3092 aa17.97■□□□□ 0.47
CLCN6-204ENST00000376491 DNM1LO00429 736 aa17.97■□□□□ 0.47
CLCN6-204ENST00000376491 ATN1P54259 1190 aaPredicted RBP17.97■□□□□ 0.47
CLCN6-204ENST00000376491 TMEM132BQ14DG7 1078 aa17.97■□□□□ 0.47
CLCN6-204ENST00000376491 PRAMEF19Q5SWL8 479 aa17.97■□□□□ 0.47
CLCN6-204ENST00000376491 GJC2Q5T442 439 aaPredicted RBP17.97■□□□□ 0.47
CLCN6-204ENST00000376491 GPR153Q6NV75 609 aa17.97■□□□□ 0.47
CLCN6-204ENST00000376491 SAMD1Q6SPF0 538 aaPredicted RBP17.97■□□□□ 0.47
CLCN6-204ENST00000376491 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.97■□□□□ 0.47
CLCN6-204ENST00000376491 MROH8Q9H579 483 aa17.97■□□□□ 0.47
CLCN6-204ENST00000376491 SH2D4AQ9H788 454 aa17.97■□□□□ 0.47
CLCN6-204ENST00000376491 FBXO28Q9NVF7 368 aa17.97■□□□□ 0.47
CLCN6-204ENST00000376491 COL6A3P12111 3177 aa17.96■□□□□ 0.47
CLCN6-204ENST00000376491 Q7L0L9 218 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms