RNA–Protein interactions for RNA: ENST00000375329.6

APOA1-205, Transcript of apolipoprotein A1, humanhuman

TSL 2 BASIC

Gene APOA1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-205ENST00000375329 GOPCQ9HD26 462 aa18.33■□□□□ 0.52
APOA1-205ENST00000375329 HTTP42858 3142 aa18.33■□□□□ 0.52
APOA1-205ENST00000375329 SMIM22K7EJ46 135 aa18.32■□□□□ 0.52
APOA1-205ENST00000375329 EEF2P13639 858 aaKnown RBP18.32■□□□□ 0.52
APOA1-205ENST00000375329 SDSP20132 328 aa18.32■□□□□ 0.52
APOA1-205ENST00000375329 MAPK4P31152 587 aa18.32■□□□□ 0.52
APOA1-205ENST00000375329 ERVK-9P63128 1117 aa18.32■□□□□ 0.52
APOA1-205ENST00000375329 ERVK-24P63145 666 aa18.32■□□□□ 0.52
APOA1-205ENST00000375329 PRKCZQ05513 592 aa18.32■□□□□ 0.52
APOA1-205ENST00000375329 PPARAQ07869 468 aa18.32■□□□□ 0.52
APOA1-205ENST00000375329 IRF5Q13568 498 aa18.32■□□□□ 0.52
APOA1-205ENST00000375329 COG2Q14746 738 aa18.32■□□□□ 0.52
APOA1-205ENST00000375329 CCDC129Q6ZRS4 1044 aa18.32■□□□□ 0.52
APOA1-205ENST00000375329 TANGO6Q9C0B7 1094 aa18.32■□□□□ 0.52
APOA1-205ENST00000375329 DIAPH3Q9NSV4 1193 aa18.32■□□□□ 0.52
APOA1-205ENST00000375329 WDR46O15213 610 aaKnown RBP18.31■□□□□ 0.52
APOA1-205ENST00000375329 FLT3LGP49771 235 aa18.31■□□□□ 0.52
APOA1-205ENST00000375329 UBXN2AP68543 259 aa18.31■□□□□ 0.52
APOA1-205ENST00000375329 NMIQ13287 307 aaPredicted RBP18.31■□□□□ 0.52
APOA1-205ENST00000375329 STK11IPQ8N1F8 1099 aa18.31■□□□□ 0.52
APOA1-205ENST00000375329 PXYLP1Q8TE99 480 aa18.31■□□□□ 0.52
APOA1-205ENST00000375329 FAM227BQ96M60 508 aa18.31■□□□□ 0.52
APOA1-205ENST00000375329 PAGR1Q9BTK6 254 aa18.31■□□□□ 0.52
APOA1-205ENST00000375329 CWC22Q9HCG8 908 aaKnown RBP18.31■□□□□ 0.52
APOA1-205ENST00000375329 NYAP2Q9P242 653 aa18.31■□□□□ 0.52
APOA1-205ENST00000375329 RBPJLQ9UBG7 517 aa18.31■□□□□ 0.52
APOA1-205ENST00000375329 BIN2Q9UBW5 565 aaPredicted RBP18.31■□□□□ 0.52
APOA1-205ENST00000375329 TNRC18O15417 2968 aaPredicted RBP18.31■□□□□ 0.52
APOA1-205ENST00000375329 CCDC171Q6TFL3 1326 aa18.3■□□□□ 0.52
APOA1-205ENST00000375329 A0A0D9SFI3 127 aa18.3■□□□□ 0.52
APOA1-205ENST00000375329 TSPY3P0CV98 308 aa18.3■□□□□ 0.52
APOA1-205ENST00000375329 TSPY8P0CW00 308 aa18.3■□□□□ 0.52
APOA1-205ENST00000375329 SIAH1Q8IUQ4 282 aa18.3■□□□□ 0.52
APOA1-205ENST00000375329 MB21D1Q8N884 522 aa18.3■□□□□ 0.52
APOA1-205ENST00000375329 SYNPO2Q9UMS6 1093 aa18.3■□□□□ 0.52
APOA1-205ENST00000375329 GREB1LQ9C091 1923 aaPredicted RBP18.29■□□□□ 0.52
APOA1-205ENST00000375329 ZMYM6O95789 1325 aa18.29■□□□□ 0.52
APOA1-205ENST00000375329 ADCY3O60266 1144 aa18.29■□□□□ 0.52
APOA1-205ENST00000375329 CLEC10AQ8IUN9 316 aa18.29■□□□□ 0.52
APOA1-205ENST00000375329 SH3TC2Q8TF17 1288 aa18.29■□□□□ 0.52
APOA1-205ENST00000375329 SOCS4Q8WXH5 440 aa18.29■□□□□ 0.52
APOA1-205ENST00000375329 TXNRD2Q9NNW7 524 aa18.29■□□□□ 0.52
APOA1-205ENST00000375329 ANAPC4Q9UJX5 808 aa18.29■□□□□ 0.52
APOA1-205ENST00000375329 GABRQQ9UN88 632 aa18.29■□□□□ 0.52
APOA1-205ENST00000375329 RBBP6Q7Z6E9 1792 aaKnown RBP18.28■□□□□ 0.52
APOA1-205ENST00000375329 MYH4Q9Y623 1939 aa18.28■□□□□ 0.52
APOA1-205ENST00000375329 SPDYE16A6NNV3 312 aaPredicted RBP18.28■□□□□ 0.52
APOA1-205ENST00000375329 PRDM1O75626 825 aa18.28■□□□□ 0.52
APOA1-205ENST00000375329 HSPD1P10809 573 aaKnown RBP18.28■□□□□ 0.52
APOA1-205ENST00000375329 NEDD1Q8NHV4 660 aa18.28■□□□□ 0.52
APOA1-205ENST00000375329 NUDT12Q9BQG2 462 aa18.28■□□□□ 0.52
APOA1-205ENST00000375329 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.28■□□□□ 0.52
APOA1-205ENST00000375329 RAD21O60216 631 aa18.27■□□□□ 0.52
APOA1-205ENST00000375329 FLOT1O75955 427 aa18.27■□□□□ 0.52
APOA1-205ENST00000375329 TTLL1O95922 423 aa18.27■□□□□ 0.52
APOA1-205ENST00000375329 FGAP02671 866 aa18.27■□□□□ 0.52
APOA1-205ENST00000375329 PCP11498 1178 aaKnown RBP18.27■□□□□ 0.52
APOA1-205ENST00000375329 TFAP4Q01664 338 aa18.27■□□□□ 0.52
APOA1-205ENST00000375329 TTC22Q5TAA0 569 aa18.27■□□□□ 0.52
APOA1-205ENST00000375329 VPS53Q5VIR6 699 aa18.27■□□□□ 0.52
APOA1-205ENST00000375329 TRMT44Q8IYL2 757 aaKnown RBP18.27■□□□□ 0.52
APOA1-205ENST00000375329 SPICE1Q8N0Z3 855 aa18.27■□□□□ 0.52
APOA1-205ENST00000375329 MKL1Q969V6 931 aa18.27■□□□□ 0.52
APOA1-205ENST00000375329 MTMR4Q9NYA4 1195 aa18.27■□□□□ 0.52
APOA1-205ENST00000375329 CENPFP49454 3210 aa18.27■□□□□ 0.52
APOA1-205ENST00000375329 PLIN4Q96Q06 1357 aa18.27■□□□□ 0.51
APOA1-205ENST00000375329 IGKV6D-41A0A0C4DH26 115 aa18.26■□□□□ 0.51
APOA1-205ENST00000375329 FOXP2O15409 715 aa18.26■□□□□ 0.51
APOA1-205ENST00000375329 CAPN2P17655 700 aa18.26■□□□□ 0.51
APOA1-205ENST00000375329 DSG3P32926 999 aa18.26■□□□□ 0.51
APOA1-205ENST00000375329 Q3C1V9 767 aa18.26■□□□□ 0.51
APOA1-205ENST00000375329 CWC27Q6UX04 472 aaKnown RBP18.26■□□□□ 0.51
APOA1-205ENST00000375329 PLEKHH3Q7Z736 793 aa18.26■□□□□ 0.51
APOA1-205ENST00000375329 ZNF589Q86UQ0 364 aaPredicted RBP18.26■□□□□ 0.51
APOA1-205ENST00000375329 NKX2-3Q8TAU0 364 aa18.26■□□□□ 0.51
APOA1-205ENST00000375329 CLIP2Q9UDT6 1046 aa18.26■□□□□ 0.51
APOA1-205ENST00000375329 GJD2Q9UKL4 321 aa18.26■□□□□ 0.51
APOA1-205ENST00000375329 IVNS1ABPQ9Y6Y0 642 aa18.26■□□□□ 0.51
APOA1-205ENST00000375329 TSPY2A6NKD2 308 aa18.25■□□□□ 0.51
APOA1-205ENST00000375329 ORC4O43929 436 aa18.25■□□□□ 0.51
APOA1-205ENST00000375329 XRCC5P13010 732 aaKnown RBP18.25■□□□□ 0.51
APOA1-205ENST00000375329 GSPT1P15170 499 aaKnown RBP18.25■□□□□ 0.51
APOA1-205ENST00000375329 NT5C2P49902 561 aa18.25■□□□□ 0.51
APOA1-205ENST00000375329 CTDSPL2Q05D32 466 aa18.25■□□□□ 0.51
APOA1-205ENST00000375329 RUFY2Q8WXA3 655 aa18.25■□□□□ 0.51
APOA1-205ENST00000375329 CEP95Q96GE4 821 aa18.25■□□□□ 0.51
APOA1-205ENST00000375329 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.25■□□□□ 0.51
APOA1-205ENST00000375329 F5H6K3 240 aa18.24■□□□□ 0.51
APOA1-205ENST00000375329 RANBP6O60518 1105 aaKnown RBP18.24■□□□□ 0.51
APOA1-205ENST00000375329 CNMDO75829 334 aa18.24■□□□□ 0.51
APOA1-205ENST00000375329 KLRC3Q07444 240 aa18.24■□□□□ 0.51
APOA1-205ENST00000375329 KIAA1755Q5JYT7 1200 aa18.24■□□□□ 0.51
APOA1-205ENST00000375329 WDR78Q5VTH9 848 aa18.24■□□□□ 0.51
APOA1-205ENST00000375329 GPR142Q7Z601 462 aa18.24■□□□□ 0.51
APOA1-205ENST00000375329 PORCNQ9H237 461 aa18.24■□□□□ 0.51
APOA1-205ENST00000375329 RNF41Q9H4P4 317 aaPredicted RBP18.24■□□□□ 0.51
APOA1-205ENST00000375329 TOMM22Q9NS69 142 aa18.24■□□□□ 0.51
APOA1-205ENST00000375329 RLFQ13129 1914 aa18.23■□□□□ 0.51
APOA1-205ENST00000375329 POTEFA5A3E0 1075 aa18.23■□□□□ 0.51
APOA1-205ENST00000375329 STRNO43815 780 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms