RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 CTAGE1Q96RT6 745 aa15.3■□□□□ 0.04
CLIC4-201ENST00000374379 PYM1Q9BRP8 204 aaKnown RBP15.3■□□□□ 0.04
CLIC4-201ENST00000374379 AKR1B15C9JRZ8 316 aaPredicted RBP15.3■□□□□ 0.04
CLIC4-201ENST00000374379 MYO1BO43795 1136 aa15.3■□□□□ 0.04
CLIC4-201ENST00000374379 CCDC175P0C221 793 aa15.3■□□□□ 0.04
CLIC4-201ENST00000374379 NONOQ15233 471 aaKnown RBP eCLIP15.3■□□□□ 0.04
CLIC4-201ENST00000374379 CTR9Q6PD62 1173 aa15.3■□□□□ 0.04
CLIC4-201ENST00000374379 CUL5Q93034 780 aa15.3■□□□□ 0.04
CLIC4-201ENST00000374379 FERMT2Q96AC1 680 aa15.3■□□□□ 0.04
CLIC4-201ENST00000374379 SAMSN1Q9NSI8 373 aaKnown RBP15.3■□□□□ 0.04
CLIC4-201ENST00000374379 CACNB3P54284 484 aa15.29■□□□□ 0.04
CLIC4-201ENST00000374379 ZNF569Q5MCW4 686 aa15.29■□□□□ 0.04
CLIC4-201ENST00000374379 SHC4Q6S5L8 630 aa15.29■□□□□ 0.04
CLIC4-201ENST00000374379 AKR1B10O60218 316 aa15.29■□□□□ 0.04
CLIC4-201ENST00000374379 NFIXQ14938 502 aa15.29■□□□□ 0.04
CLIC4-201ENST00000374379 ELF2Q15723 593 aa15.29■□□□□ 0.04
CLIC4-201ENST00000374379 PKD2L1Q9P0L9 805 aa15.29■□□□□ 0.04
CLIC4-201ENST00000374379 CAMTA1Q9Y6Y1 1673 aa15.29■□□□□ 0.04
CLIC4-201ENST00000374379 USP49Q70CQ1 688 aa15.29■□□□□ 0.04
CLIC4-201ENST00000374379 CGNQ9P2M7 1197 aaKnown RBP15.29■□□□□ 0.04
CLIC4-201ENST00000374379 SPAG1Q07617 926 aa15.29■□□□□ 0.04
CLIC4-201ENST00000374379 REXO1Q8N1G1 1221 aaKnown RBP15.29■□□□□ 0.04
CLIC4-201ENST00000374379 SLC16A2P36021 539 aa15.28■□□□□ 0.04
CLIC4-201ENST00000374379 SLC1A4P43007 532 aa15.28■□□□□ 0.04
CLIC4-201ENST00000374379 PAK1Q13153 545 aa15.28■□□□□ 0.04
CLIC4-201ENST00000374379 PTF1AQ7RTS3 328 aa15.28■□□□□ 0.04
CLIC4-201ENST00000374379 OGFOD1Q8N543 542 aa15.28■□□□□ 0.04
CLIC4-201ENST00000374379 NELFBQ8WX92 580 aa15.28■□□□□ 0.04
CLIC4-201ENST00000374379 SAMM50Q9Y512 469 aa15.28■□□□□ 0.04
CLIC4-201ENST00000374379 CCDC102AQ96A19 550 aa15.28■□□□□ 0.04
CLIC4-201ENST00000374379 MAN1B1Q9UKM7 699 aa15.28■□□□□ 0.04
CLIC4-201ENST00000374379 FMN2Q9NZ56 1722 aa15.28■□□□□ 0.04
CLIC4-201ENST00000374379 AP5Z1O43299 807 aa15.28■□□□□ 0.04
CLIC4-201ENST00000374379 CSGALNACT2Q8N6G5 542 aa15.28■□□□□ 0.04
CLIC4-201ENST00000374379 ZNF215Q9UL58 517 aaPredicted RBP15.28■□□□□ 0.04
CLIC4-201ENST00000374379 LTN1O94822 1766 aa15.28■□□□□ 0.04
CLIC4-201ENST00000374379 GRAPQ13588 217 aa15.27■□□□□ 0.04
CLIC4-201ENST00000374379 GRAPLQ8TC17 118 aaPredicted RBP15.27■□□□□ 0.04
CLIC4-201ENST00000374379 CARD6Q9BX69 1037 aa15.27■□□□□ 0.04
CLIC4-201ENST00000374379 JADE2Q9NQC1 790 aa15.27■□□□□ 0.04
CLIC4-201ENST00000374379 LRWD1Q9UFC0 647 aa15.27■□□□□ 0.04
CLIC4-201ENST00000374379 FAM196BA6NMK8 535 aa15.27■□□□□ 0.04
CLIC4-201ENST00000374379 DDAH1O94760 285 aa15.27■□□□□ 0.04
CLIC4-201ENST00000374379 ATP2B4P23634 1241 aa15.27■□□□□ 0.04
CLIC4-201ENST00000374379 GRIN1Q05586 938 aa15.27■□□□□ 0.04
CLIC4-201ENST00000374379 SPECC1LQ69YQ0 1117 aa15.27■□□□□ 0.04
CLIC4-201ENST00000374379 TXNRD3Q86VQ6 643 aa15.27■□□□□ 0.04
CLIC4-201ENST00000374379 LEMD3Q9Y2U8 911 aa15.27■□□□□ 0.04
CLIC4-201ENST00000374379 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.27■□□□□ 0.04
CLIC4-201ENST00000374379 ABCC12Q96J65 1359 aa15.27■□□□□ 0.04
CLIC4-201ENST00000374379 KRT9P35527 623 aa15.27■□□□□ 0.03
CLIC4-201ENST00000374379 TBC1D8BQ0IIM8 1120 aa15.27■□□□□ 0.03
CLIC4-201ENST00000374379 CABP7Q86V35 215 aa15.27■□□□□ 0.03
CLIC4-201ENST00000374379 SGMS1Q86VZ5 419 aa15.27■□□□□ 0.03
CLIC4-201ENST00000374379 COA7Q96BR5 231 aa15.27■□□□□ 0.03
CLIC4-201ENST00000374379 PRR29P0C7W0 189 aa15.26■□□□□ 0.03
CLIC4-201ENST00000374379 ADGRA1Q86SQ6 560 aa15.26■□□□□ 0.03
CLIC4-201ENST00000374379 SNX29Q8TEQ0 813 aa15.26■□□□□ 0.03
CLIC4-201ENST00000374379 RUFY1Q96T51 708 aa15.26■□□□□ 0.03
CLIC4-201ENST00000374379 LUC7L2Q9Y383 392 aaKnown RBP15.26■□□□□ 0.03
CLIC4-201ENST00000374379 SPDYE3A6NKU9 549 aa15.26■□□□□ 0.03
CLIC4-201ENST00000374379 ALX1Q15699 326 aa15.26■□□□□ 0.03
CLIC4-201ENST00000374379 NSUN4Q96CB9 384 aaKnown RBP15.26■□□□□ 0.03
CLIC4-201ENST00000374379 CAPZA3Q96KX2 299 aa15.26■□□□□ 0.03
CLIC4-201ENST00000374379 SRRTQ9BXP5 876 aaKnown RBP15.26■□□□□ 0.03
CLIC4-201ENST00000374379 CT47A1Q5JQC4 288 aaPredicted RBP15.26■□□□□ 0.03
CLIC4-201ENST00000374379 KCNF1Q9H3M0 494 aa15.26■□□□□ 0.03
CLIC4-201ENST00000374379 IMPACTQ9P2X3 320 aa15.26■□□□□ 0.03
CLIC4-201ENST00000374379 ZHX1Q9UKY1 873 aaPredicted RBP15.26■□□□□ 0.03
CLIC4-201ENST00000374379 TMEM232C9JQI7 657 aa15.26■□□□□ 0.03
CLIC4-201ENST00000374379 SEMA3EO15041 775 aa15.26■□□□□ 0.03
CLIC4-201ENST00000374379 CHMP2AO43633 222 aa15.26■□□□□ 0.03
CLIC4-201ENST00000374379 ZFYVE27Q5T4F4 411 aa15.26■□□□□ 0.03
CLIC4-201ENST00000374379 STAG2Q8N3U4 1231 aa15.26■□□□□ 0.03
CLIC4-201ENST00000374379 PLS1Q14651 629 aa15.25■□□□□ 0.03
CLIC4-201ENST00000374379 NAA30Q147X3 362 aaPredicted RBP15.25■□□□□ 0.03
CLIC4-201ENST00000374379 AXDND1Q5T1B0 1012 aaPredicted RBP15.25■□□□□ 0.03
CLIC4-201ENST00000374379 TBC1D22AQ8WUA7 517 aa15.25■□□□□ 0.03
CLIC4-201ENST00000374379 PIGSQ96S52 555 aa15.25■□□□□ 0.03
CLIC4-201ENST00000374379 DCCP43146 1447 aa15.25■□□□□ 0.03
CLIC4-201ENST00000374379 USP27XA6NNY8 438 aa15.25■□□□□ 0.03
CLIC4-201ENST00000374379 KCTD1Q719H9 257 aa15.25■□□□□ 0.03
CLIC4-201ENST00000374379 SV2BQ7L1I2 683 aa15.25■□□□□ 0.03
CLIC4-201ENST00000374379 BRIP1Q9BX63 1249 aa15.25■□□□□ 0.03
CLIC4-201ENST00000374379 PLCD1P51178 756 aa15.25■□□□□ 0.03
CLIC4-201ENST00000374379 ADCY7P51828 1080 aa15.25■□□□□ 0.03
CLIC4-201ENST00000374379 MRPL12P52815 198 aaKnown RBP15.25■□□□□ 0.03
CLIC4-201ENST00000374379 CALCRLQ16602 461 aa15.25■□□□□ 0.03
CLIC4-201ENST00000374379 TMTC3Q6ZXV5 915 aa15.25■□□□□ 0.03
CLIC4-201ENST00000374379 SLF1Q9BQI6 1058 aa15.25■□□□□ 0.03
CLIC4-201ENST00000374379 TRPC5Q9UL62 973 aaPredicted RBP15.25■□□□□ 0.03
CLIC4-201ENST00000374379 GOLGA6L9A6NEM1 432 aa15.24■□□□□ 0.03
CLIC4-201ENST00000374379 PRPF3O43395 683 aaKnown RBP15.24■□□□□ 0.03
CLIC4-201ENST00000374379 CLEC10AQ8IUN9 316 aa15.24■□□□□ 0.03
CLIC4-201ENST00000374379 NELFCDQ8IXH7 590 aa15.24■□□□□ 0.03
CLIC4-201ENST00000374379 SPICE1Q8N0Z3 855 aa15.24■□□□□ 0.03
CLIC4-201ENST00000374379 TEKT1Q969V4 418 aa15.24■□□□□ 0.03
CLIC4-201ENST00000374379 ZBTB21Q9ULJ3 1066 aa15.24■□□□□ 0.03
CLIC4-201ENST00000374379 RHOXF2BP0C7M4 288 aa15.24■□□□□ 0.03
CLIC4-201ENST00000374379 PTPREP23469 700 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms