RNA–Protein interactions for RNA: ENST00000374223.5

UBXN11-207, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best) BASIC

Gene UBXN11, Length 1,312 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-207ENST00000374223 ATP8A2Q9NTI2 1148 aa17.2■□□□□ 0.34
UBXN11-207ENST00000374223 GSG1L2A8MUP6 293 aa17.19■□□□□ 0.34
UBXN11-207ENST00000374223 CCND3P30281 292 aaPredicted RBP17.19■□□□□ 0.34
UBXN11-207ENST00000374223 RRP1P56182 461 aaKnown RBP17.19■□□□□ 0.34
UBXN11-207ENST00000374223 CACNB2Q08289 660 aaPredicted RBP17.19■□□□□ 0.34
UBXN11-207ENST00000374223 PLEKHH3Q7Z736 793 aa17.19■□□□□ 0.34
UBXN11-207ENST00000374223 YTHDC1Q96MU7 727 aaKnown RBP17.19■□□□□ 0.34
UBXN11-207ENST00000374223 NUDT12Q9BQG2 462 aa17.19■□□□□ 0.34
UBXN11-207ENST00000374223 CHMP4BQ9H444 224 aaKnown RBP17.19■□□□□ 0.34
UBXN11-207ENST00000374223 EPB41L4AQ9HCS5 686 aaPredicted RBP17.19■□□□□ 0.34
UBXN11-207ENST00000374223 PRKAR2AP13861 404 aaKnown RBP17.18■□□□□ 0.34
UBXN11-207ENST00000374223 MAP3K21Q5TCX8 1036 aa17.18■□□□□ 0.34
UBXN11-207ENST00000374223 C16orf86Q6ZW13 317 aa17.18■□□□□ 0.34
UBXN11-207ENST00000374223 KBTBD3Q8NAB2 608 aa17.18■□□□□ 0.34
UBXN11-207ENST00000374223 ANKLE1Q8NAG6 615 aa17.18■□□□□ 0.34
UBXN11-207ENST00000374223 NPLOC4Q8TAT6 608 aa17.18■□□□□ 0.34
UBXN11-207ENST00000374223 PI4K2BQ8TCG2 481 aa17.18■□□□□ 0.34
UBXN11-207ENST00000374223 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.18■□□□□ 0.341e-6■■■■■ 38.5
UBXN11-207ENST00000374223 RABGAP1Q9Y3P9 1069 aa17.18■□□□□ 0.34
UBXN11-207ENST00000374223 SMCHD1A6NHR9 2005 aa17.17■□□□□ 0.34
UBXN11-207ENST00000374223 RPTORQ8N122 1335 aa17.17■□□□□ 0.34
UBXN11-207ENST00000374223 USP14P54578 494 aa17.17■□□□□ 0.34
UBXN11-207ENST00000374223 WDR78Q5VTH9 848 aa17.17■□□□□ 0.34
UBXN11-207ENST00000374223 SAMD1Q6SPF0 538 aaPredicted RBP17.17■□□□□ 0.34
UBXN11-207ENST00000374223 NECAB2Q7Z6G3 386 aa17.17■□□□□ 0.34
UBXN11-207ENST00000374223 FBXO28Q9NVF7 368 aa17.17■□□□□ 0.34
UBXN11-207ENST00000374223 EEF2P13639 858 aaKnown RBP17.16■□□□□ 0.34
UBXN11-207ENST00000374223 MAPK4P31152 587 aa17.16■□□□□ 0.34
UBXN11-207ENST00000374223 TMEM179Q6ZVK1 233 aa17.16■□□□□ 0.34
UBXN11-207ENST00000374223 ATG4CQ96DT6 458 aa17.16■□□□□ 0.34
UBXN11-207ENST00000374223 HMX1Q9NP08 348 aaPredicted RBP17.16■□□□□ 0.34
UBXN11-207ENST00000374223 SWAP70Q9UH65 585 aa17.16■□□□□ 0.34
UBXN11-207ENST00000374223 PLXNA1Q9UIW2 1896 aa17.15■□□□□ 0.34
UBXN11-207ENST00000374223 SALL3Q9BXA9 1300 aa17.15■□□□□ 0.34
UBXN11-207ENST00000374223 RNF113AO15541 343 aaKnown RBP17.15■□□□□ 0.34
UBXN11-207ENST00000374223 RASA1P20936 1047 aa17.15■□□□□ 0.34
UBXN11-207ENST00000374223 PTPREP23469 700 aa17.15■□□□□ 0.34
UBXN11-207ENST00000374223 ATP2B2Q01814 1243 aa17.15■□□□□ 0.34
UBXN11-207ENST00000374223 ICA1Q05084 483 aa17.15■□□□□ 0.34
UBXN11-207ENST00000374223 LBX2Q6XYB7 198 aa17.15■□□□□ 0.34
UBXN11-207ENST00000374223 TRPV1Q8NER1 839 aa17.15■□□□□ 0.34
UBXN11-207ENST00000374223 MOV10L1Q9BXT6 1211 aaKnown RBP17.15■□□□□ 0.34
UBXN11-207ENST00000374223 TANGO6Q9C0B7 1094 aa17.15■□□□□ 0.34
UBXN11-207ENST00000374223 TMX2Q9Y320 296 aa17.15■□□□□ 0.34
UBXN11-207ENST00000374223 LAMA3Q16787 3333 aa17.14■□□□□ 0.33
UBXN11-207ENST00000374223 MINDY4BA8MYZ0 360 aa17.14■□□□□ 0.33
UBXN11-207ENST00000374223 GPAA1O43292 621 aa17.14■□□□□ 0.33
UBXN11-207ENST00000374223 XRCC5P13010 732 aaKnown RBP17.14■□□□□ 0.33
UBXN11-207ENST00000374223 ZKSCAN1P17029 563 aaPredicted RBP17.14■□□□□ 0.33
UBXN11-207ENST00000374223 MAP2K5Q13163 448 aa17.14■□□□□ 0.33
UBXN11-207ENST00000374223 LHX8Q68G74 356 aa17.14■□□□□ 0.33
UBXN11-207ENST00000374223 APPBP2Q92624 585 aa17.14■□□□□ 0.33
UBXN11-207ENST00000374223 NUP88Q99567 741 aaPredicted RBP17.14■□□□□ 0.33
UBXN11-207ENST00000374223 TACC3Q9Y6A5 838 aa17.14■□□□□ 0.33
UBXN11-207ENST00000374223 PFASO15067 1338 aa17.13■□□□□ 0.33
UBXN11-207ENST00000374223 FOXP2O15409 715 aa17.13■□□□□ 0.33
UBXN11-207ENST00000374223 COBLO75128 1261 aa17.13■□□□□ 0.33
UBXN11-207ENST00000374223 PRDM1O75626 825 aa17.13■□□□□ 0.33
UBXN11-207ENST00000374223 DSG3P32926 999 aa17.13■□□□□ 0.33
UBXN11-207ENST00000374223 RGS2P41220 211 aa17.13■□□□□ 0.33
UBXN11-207ENST00000374223 COG2Q14746 738 aa17.13■□□□□ 0.33
UBXN11-207ENST00000374223 CCDC129Q6ZRS4 1044 aa17.13■□□□□ 0.33
UBXN11-207ENST00000374223 CCAR1Q8IX12 1150 aaKnown RBP17.13■□□□□ 0.33
UBXN11-207ENST00000374223 SOCS4Q8WXH5 440 aa17.13■□□□□ 0.33
UBXN11-207ENST00000374223 VCPKMTQ9H867 229 aa17.13■□□□□ 0.33
UBXN11-207ENST00000374223 INCENPQ9NQS7 918 aa17.13■□□□□ 0.33
UBXN11-207ENST00000374223 OGDHLQ9ULD0 1010 aa17.13■□□□□ 0.33
UBXN11-207ENST00000374223 ZNF236Q9UL36 1845 aa17.12■□□□□ 0.33
UBXN11-207ENST00000374223 IGHA2P01877 340 aa17.12■□□□□ 0.33
UBXN11-207ENST00000374223 CYP2C19P33261 490 aa17.12■□□□□ 0.33
UBXN11-207ENST00000374223 BMP8BP34820 402 aa17.12■□□□□ 0.33
UBXN11-207ENST00000374223 GRB14Q14449 540 aa17.12■□□□□ 0.33
UBXN11-207ENST00000374223 ZSCAN25Q6NSZ9 544 aa17.12■□□□□ 0.33
UBXN11-207ENST00000374223 APBA2Q99767 749 aa17.12■□□□□ 0.33
UBXN11-207ENST00000374223 SPATC1LQ9H0A9 340 aa17.12■□□□□ 0.33
UBXN11-207ENST00000374223 STAP2Q9UGK3 403 aa17.12■□□□□ 0.33
UBXN11-207ENST00000374223 SLC15A5A6NIM6 579 aa17.11■□□□□ 0.33
UBXN11-207ENST00000374223 FLOT1O75955 427 aa17.11■□□□□ 0.33
UBXN11-207ENST00000374223 ERCC3P19447 782 aa17.11■□□□□ 0.33
UBXN11-207ENST00000374223 TMEM132BQ14DG7 1078 aa17.11■□□□□ 0.33
UBXN11-207ENST00000374223 SBK1Q52WX2 424 aa17.11■□□□□ 0.33
UBXN11-207ENST00000374223 GTF3C2Q8WUA4 911 aaPredicted RBP17.11■□□□□ 0.33
UBXN11-207ENST00000374223 CHMP4CQ96CF2 233 aa17.11■□□□□ 0.33
UBXN11-207ENST00000374223 GDF15Q99988 308 aa17.11■□□□□ 0.33
UBXN11-207ENST00000374223 NBPF3Q9H094 633 aa17.11■□□□□ 0.33
UBXN11-207ENST00000374223 CWC22Q9HCG8 908 aaKnown RBP17.11■□□□□ 0.33
UBXN11-207ENST00000374223 RAD21O60216 631 aa17.1■□□□□ 0.33
UBXN11-207ENST00000374223 PLS1Q14651 629 aa17.1■□□□□ 0.33
UBXN11-207ENST00000374223 PRAMEF19Q5SWL8 479 aa17.1■□□□□ 0.33
UBXN11-207ENST00000374223 FAM83BQ5T0W9 1011 aa17.1■□□□□ 0.33
UBXN11-207ENST00000374223 ANO1Q5XXA6 986 aa17.1■□□□□ 0.33
UBXN11-207ENST00000374223 CCDC17Q96LX7 622 aa17.1■□□□□ 0.33
UBXN11-207ENST00000374223 ARHGEF10LQ9HCE6 1279 aa17.1■□□□□ 0.33
UBXN11-207ENST00000374223 ZMYND8Q9ULU4 1186 aaPredicted RBP17.1■□□□□ 0.33
UBXN11-207ENST00000374223 MCM3APO60318 1980 aa17.1■□□□□ 0.33
UBXN11-207ENST00000374223 SOX1O00570 391 aaPredicted RBP17.09■□□□□ 0.33
UBXN11-207ENST00000374223 SYN1P17600 705 aa17.09■□□□□ 0.33
UBXN11-207ENST00000374223 ADORA2AP29274 412 aa17.09■□□□□ 0.33
UBXN11-207ENST00000374223 CCNA1P78396 465 aa17.09■□□□□ 0.33
UBXN11-207ENST00000374223 ANKRD45Q5TZF3 282 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms