RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 CEBPZQ03701 1054 aaKnown RBP14.48□□□□□ -0.09
PRPF4-202ENST00000374199 GMLQ99445 158 aa14.48□□□□□ -0.09
PRPF4-202ENST00000374199 TTF2Q9UNY4 1162 aaKnown RBP14.48□□□□□ -0.09
PRPF4-202ENST00000374199 SAFBQ15424 915 aaKnown RBP eCLIP14.47□□□□□ -0.09
PRPF4-202ENST00000374199 CAMK4Q16566 473 aa14.47□□□□□ -0.09
PRPF4-202ENST00000374199 C4orf32Q8N8J7 132 aa14.47□□□□□ -0.09
PRPF4-202ENST00000374199 SUPT20HQ8NEM7 779 aa14.47□□□□□ -0.09
PRPF4-202ENST00000374199 TEKT1Q969V4 418 aa14.47□□□□□ -0.09
PRPF4-202ENST00000374199 RIOX1Q9H6W3 641 aa14.47□□□□□ -0.09
PRPF4-202ENST00000374199 CBX8Q9HC52 389 aa14.47□□□□□ -0.09
PRPF4-202ENST00000374199 RIMBP2O15034 1052 aa14.47□□□□□ -0.09
PRPF4-202ENST00000374199 ZNF202O95125 648 aa14.47□□□□□ -0.09
PRPF4-202ENST00000374199 TSPY3P0CV98 308 aa14.47□□□□□ -0.09
PRPF4-202ENST00000374199 TSPY8P0CW00 308 aa14.47□□□□□ -0.09
PRPF4-202ENST00000374199 TOP1P11387 765 aaKnown RBP14.47□□□□□ -0.09
PRPF4-202ENST00000374199 XBP1P17861 261 aa14.47□□□□□ -0.09
PRPF4-202ENST00000374199 CRKP46108 304 aa14.47□□□□□ -0.09
PRPF4-202ENST00000374199 TATDN1Q6P1N9 297 aa14.47□□□□□ -0.09
PRPF4-202ENST00000374199 STAG2Q8N3U4 1231 aa14.47□□□□□ -0.09
PRPF4-202ENST00000374199 KRI1Q8N9T8 703 aaKnown RBP14.47□□□□□ -0.09
PRPF4-202ENST00000374199 MTMR8Q96EF0 704 aa14.47□□□□□ -0.09
PRPF4-202ENST00000374199 DNAJC18Q9H819 358 aa14.47□□□□□ -0.09
PRPF4-202ENST00000374199 MTMR4Q9NYA4 1195 aa14.47□□□□□ -0.09
PRPF4-202ENST00000374199 YDJCA8MPS7 323 aa14.47□□□□□ -0.09
PRPF4-202ENST00000374199 STX1AQ16623 288 aa14.47□□□□□ -0.09
PRPF4-202ENST00000374199 PLA2G4DQ86XP0 818 aa14.47□□□□□ -0.09
PRPF4-202ENST00000374199 KCNQ5Q9NR82 932 aa14.47□□□□□ -0.09
PRPF4-202ENST00000374199 BARHL2Q9NY43 387 aa14.47□□□□□ -0.09
PRPF4-202ENST00000374199 VPS54Q9P1Q0 977 aa14.47□□□□□ -0.09
PRPF4-202ENST00000374199 KIAA1468Q9P260 1216 aa14.47□□□□□ -0.09
PRPF4-202ENST00000374199 PCDHB6Q9Y5E3 794 aa14.47□□□□□ -0.09
PRPF4-202ENST00000374199 A0A1B0GVL5 298 aa14.46□□□□□ -0.09
PRPF4-202ENST00000374199 STXBP3O00186 592 aa14.46□□□□□ -0.09
PRPF4-202ENST00000374199 BMP15O95972 392 aa14.46□□□□□ -0.09
PRPF4-202ENST00000374199 CLCN1P35523 988 aa14.46□□□□□ -0.09
PRPF4-202ENST00000374199 ANO6Q4KMQ2 910 aa14.46□□□□□ -0.09
PRPF4-202ENST00000374199 DHX40Q8IX18 779 aaKnown RBP14.46□□□□□ -0.09
PRPF4-202ENST00000374199 MXD3Q9BW11 206 aa14.46□□□□□ -0.09
PRPF4-202ENST00000374199 MKNK2Q9HBH9 465 aa14.46□□□□□ -0.09
PRPF4-202ENST00000374199 FAM198AQ9UFP1 575 aa14.46□□□□□ -0.09
PRPF4-202ENST00000374199 SAP30BPQ9UHR5 308 aaKnown RBP14.46□□□□□ -0.09
PRPF4-202ENST00000374199 ESYT2A0FGR8 921 aa14.46□□□□□ -0.09
PRPF4-202ENST00000374199 hCG_1984214I3L0E3 225 aa14.46□□□□□ -0.09
PRPF4-202ENST00000374199 ADAMTS3O15072 1205 aa14.46□□□□□ -0.09
PRPF4-202ENST00000374199 VEGFAP15692 232 aaPredicted RBP14.46□□□□□ -0.09
PRPF4-202ENST00000374199 CHRNA5P30532 468 aa14.46□□□□□ -0.09
PRPF4-202ENST00000374199 ATP2C1P98194 919 aaPredicted RBP14.46□□□□□ -0.09
PRPF4-202ENST00000374199 DOK7Q18PE1 504 aa14.46□□□□□ -0.09
PRPF4-202ENST00000374199 ZNF444Q8N0Y2 327 aaPredicted RBP14.46□□□□□ -0.09
PRPF4-202ENST00000374199 ZNF713Q8N859 430 aaPredicted RBP14.46□□□□□ -0.09
PRPF4-202ENST00000374199 MKL1Q969V6 931 aa14.46□□□□□ -0.09
PRPF4-202ENST00000374199 WNT7AO00755 349 aa14.45□□□□□ -0.1
PRPF4-202ENST00000374199 KINO60870 393 aaKnown RBP14.45□□□□□ -0.1
PRPF4-202ENST00000374199 CDC25BP30305 580 aa14.45□□□□□ -0.1
PRPF4-202ENST00000374199 TYW1BQ6NUM6 668 aa14.45□□□□□ -0.1
PRPF4-202ENST00000374199 RNF214Q8ND24 703 aa14.45□□□□□ -0.1
PRPF4-202ENST00000374199 CEP95Q96GE4 821 aa14.45□□□□□ -0.1
PRPF4-202ENST00000374199 SYNPO2Q9UMS6 1093 aa14.45□□□□□ -0.1
PRPF4-202ENST00000374199 CEP131Q9UPN4 1083 aa14.45□□□□□ -0.1
PRPF4-202ENST00000374199 SARSP49591 514 aaKnown RBP14.45□□□□□ -0.1
PRPF4-202ENST00000374199 CKAP2LQ8IYA6 745 aa14.45□□□□□ -0.1
PRPF4-202ENST00000374199 ZMYND12Q9H0C1 365 aa14.45□□□□□ -0.1
PRPF4-202ENST00000374199 DHX36Q9H2U1 1008 aaKnown RBP14.45□□□□□ -0.1
PRPF4-202ENST00000374199 SH3BP5LQ7L8J4 393 aa14.45□□□□□ -0.1
PRPF4-202ENST00000374199 SH3RF1Q7Z6J0 888 aa14.45□□□□□ -0.1
PRPF4-202ENST00000374199 MTMR14Q8NCE2 650 aa14.45□□□□□ -0.1
PRPF4-202ENST00000374199 PCDHA4Q9UN74 947 aa14.45□□□□□ -0.1
PRPF4-202ENST00000374199 ESPNB1AK53 854 aa14.44□□□□□ -0.1
PRPF4-202ENST00000374199 C11orf57Q6ZUT1 292 aaPredicted RBP14.44□□□□□ -0.1
PRPF4-202ENST00000374199 ANP32BQ92688 251 aaKnown RBP14.44□□□□□ -0.1
PRPF4-202ENST00000374199 ZBED3Q96IU2 234 aaPredicted RBP14.44□□□□□ -0.1
PRPF4-202ENST00000374199 PDHBP11177 359 aa14.44□□□□□ -0.1
PRPF4-202ENST00000374199 CALML3P27482 149 aa14.44□□□□□ -0.1
PRPF4-202ENST00000374199 FERMT2Q96AC1 680 aa14.44□□□□□ -0.1
PRPF4-202ENST00000374199 PDGFDQ9GZP0 370 aaPredicted RBP14.44□□□□□ -0.1
PRPF4-202ENST00000374199 USP40Q9NVE5 1235 aa14.44□□□□□ -0.1
PRPF4-202ENST00000374199 SERPINB13Q9UIV8 391 aa14.44□□□□□ -0.1
PRPF4-202ENST00000374199 ATAD5Q96QE3 1844 aa14.44□□□□□ -0.1
PRPF4-202ENST00000374199 FAM205CA6NFA0 338 aa14.43□□□□□ -0.1
PRPF4-202ENST00000374199 ZNF500O60304 480 aaPredicted RBP14.43□□□□□ -0.1
PRPF4-202ENST00000374199 WWC2Q6AWC2 1192 aa14.43□□□□□ -0.1
PRPF4-202ENST00000374199 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.43□□□□□ -0.1
PRPF4-202ENST00000374199 ZSCAN30Q86W11 494 aa14.43□□□□□ -0.1
PRPF4-202ENST00000374199 ZNF622Q969S3 477 aaKnown RBP eCLIP14.43□□□□□ -0.17e-6■■□□□ 12.8
PRPF4-202ENST00000374199 ACTN4O43707 911 aaKnown RBP14.43□□□□□ -0.1
PRPF4-202ENST00000374199 VIL1P09327 827 aaKnown RBP14.43□□□□□ -0.1
PRPF4-202ENST00000374199 RTKN2Q8IZC4 609 aa14.43□□□□□ -0.1
PRPF4-202ENST00000374199 DBNDD1Q9H9R9 158 aa14.43□□□□□ -0.1
PRPF4-202ENST00000374199 ENTPD3O75355 529 aa14.43□□□□□ -0.1
PRPF4-202ENST00000374199 GRIN1Q05586 938 aa14.43□□□□□ -0.1
PRPF4-202ENST00000374199 NFIAQ12857 509 aa14.43□□□□□ -0.1
PRPF4-202ENST00000374199 ORC2Q13416 577 aaPredicted RBP14.43□□□□□ -0.1
PRPF4-202ENST00000374199 ARL6IP4Q66PJ3 421 aaKnown RBP14.43□□□□□ -0.1
PRPF4-202ENST00000374199 SASS6Q6UVJ0 657 aa14.43□□□□□ -0.1
PRPF4-202ENST00000374199 CCDC125Q86Z20 511 aa14.43□□□□□ -0.1
PRPF4-202ENST00000374199 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.43□□□□□ -0.1
PRPF4-202ENST00000374199 MARCKSP29966 332 aaPredicted RBP14.42□□□□□ -0.1
PRPF4-202ENST00000374199 AKAP17AQ02040 695 aaKnown RBP14.42□□□□□ -0.1
PRPF4-202ENST00000374199 ASPRV1Q53RT3 343 aa14.42□□□□□ -0.1
PRPF4-202ENST00000374199 NOM1Q5C9Z4 860 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms