RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 OSBP2Q969R2 916 aa12.14□□□□□ -0.47
CSMD2-204ENST00000373380 CCDC114Q96M63 670 aa12.14□□□□□ -0.47
CSMD2-204ENST00000373380 GOLGA6AQ9NYA3 693 aa12.14□□□□□ -0.47
CSMD2-204ENST00000373380 ZDHHC9Q9Y397 364 aa12.14□□□□□ -0.47
CSMD2-204ENST00000373380 IKBKGQ9Y6K9 419 aa12.14□□□□□ -0.47
CSMD2-204ENST00000373380 A0A1W2PQ27 194 aa12.14□□□□□ -0.47
CSMD2-204ENST00000373380 A0A1W2PQ64 194 aa12.14□□□□□ -0.47
CSMD2-204ENST00000373380 A0A1W2PQD8 194 aa12.14□□□□□ -0.47
CSMD2-204ENST00000373380 RRAGAQ7L523 313 aa12.14□□□□□ -0.47
CSMD2-204ENST00000373380 KLHL7Q8IXQ5 586 aa12.14□□□□□ -0.47
CSMD2-204ENST00000373380 CNBD1Q8NA66 436 aa12.14□□□□□ -0.47
CSMD2-204ENST00000373380 SYNCQ9H7C4 482 aa12.14□□□□□ -0.47
CSMD2-204ENST00000373380 GJB4Q9NTQ9 266 aa12.14□□□□□ -0.47
CSMD2-204ENST00000373380 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.14□□□□□ -0.47
CSMD2-204ENST00000373380 ERVV-2B6SEH9 535 aa12.13□□□□□ -0.47
CSMD2-204ENST00000373380 PPP1R2P41236 205 aa12.13□□□□□ -0.47
CSMD2-204ENST00000373380 SF3A3Q12874 501 aaKnown RBP eCLIP12.13□□□□□ -0.47
CSMD2-204ENST00000373380 SLC9C1Q4G0N8 1177 aa12.13□□□□□ -0.47
CSMD2-204ENST00000373380 GSTA5Q7RTV2 222 aa12.13□□□□□ -0.47
CSMD2-204ENST00000373380 USP37Q86T82 979 aa12.13□□□□□ -0.47
CSMD2-204ENST00000373380 CCDC50Q8IVM0 306 aa12.13□□□□□ -0.47
CSMD2-204ENST00000373380 GPR161Q8N6U8 529 aaKnown RBP12.13□□□□□ -0.47
CSMD2-204ENST00000373380 FBF1Q8TES7 1133 aa12.13□□□□□ -0.47
CSMD2-204ENST00000373380 REREQ9P2R6 1566 aa12.13□□□□□ -0.47
CSMD2-204ENST00000373380 MAP2P11137 1827 aaKnown RBP12.13□□□□□ -0.47
CSMD2-204ENST00000373380 PDE8BO95263 885 aa12.13□□□□□ -0.47
CSMD2-204ENST00000373380 PTGDRQ13258 359 aa12.13□□□□□ -0.47
CSMD2-204ENST00000373380 TUBB2AQ13885 445 aa12.13□□□□□ -0.47
CSMD2-204ENST00000373380 POLA2Q14181 598 aa12.13□□□□□ -0.47
CSMD2-204ENST00000373380 ARID5BQ14865 1188 aa12.13□□□□□ -0.47
CSMD2-204ENST00000373380 INF2Q27J81 1249 aa12.13□□□□□ -0.47
CSMD2-204ENST00000373380 CERS3Q8IU89 383 aa12.13□□□□□ -0.47
CSMD2-204ENST00000373380 LINC00301Q8NCQ3 95 aa12.13□□□□□ -0.47
CSMD2-204ENST00000373380 NOX5Q96PH1 765 aa12.13□□□□□ -0.47
CSMD2-204ENST00000373380 CCDC77Q9BR77 488 aa12.13□□□□□ -0.47
CSMD2-204ENST00000373380 TUBB2BQ9BVA1 445 aa12.13□□□□□ -0.47
CSMD2-204ENST00000373380 CARMIL3Q8ND23 1372 aa12.13□□□□□ -0.47
CSMD2-204ENST00000373380 OVOS2A0A0J9YW53 1432 aa12.13□□□□□ -0.47
CSMD2-204ENST00000373380 OVOS2Q6IE36 1432 aa12.13□□□□□ -0.47
CSMD2-204ENST00000373380 CEP104O60308 925 aa12.13□□□□□ -0.47
CSMD2-204ENST00000373380 PCCAP05165 728 aaPredicted RBP12.13□□□□□ -0.47
CSMD2-204ENST00000373380 NUP58Q9BVL2 599 aa12.13□□□□□ -0.47
CSMD2-204ENST00000373380 SAR1BQ9Y6B6 198 aa12.13□□□□□ -0.47
CSMD2-204ENST00000373380 GOLGA6BA6NDN3 693 aa12.12□□□□□ -0.47
CSMD2-204ENST00000373380 KCNJ18B7U540 433 aa12.12□□□□□ -0.47
CSMD2-204ENST00000373380 HMGB2P26583 209 aaKnown RBP12.12□□□□□ -0.47
CSMD2-204ENST00000373380 RPS8P62241 208 aaKnown RBP12.12□□□□□ -0.47
CSMD2-204ENST00000373380 TTLL12Q14166 644 aaPredicted RBP12.12□□□□□ -0.47
CSMD2-204ENST00000373380 KCNJ12Q14500 433 aa12.12□□□□□ -0.47
CSMD2-204ENST00000373380 KRT25Q7Z3Z0 450 aa12.12□□□□□ -0.47
CSMD2-204ENST00000373380 GRAMD1CQ8IYS0 662 aa12.12□□□□□ -0.47
CSMD2-204ENST00000373380 IFIH1Q9BYX4 1025 aaKnown RBP12.12□□□□□ -0.47
CSMD2-204ENST00000373380 KCNK9Q9NPC2 374 aa12.12□□□□□ -0.47
CSMD2-204ENST00000373380 MAEAQ7L5Y9 396 aa12.12□□□□□ -0.47
CSMD2-204ENST00000373380 SMYD4Q8IYR2 804 aaPredicted RBP12.12□□□□□ -0.47
CSMD2-204ENST00000373380 REXO1Q8N1G1 1221 aaKnown RBP12.12□□□□□ -0.47
CSMD2-204ENST00000373380 WDR66Q8TBY9 1149 aa12.12□□□□□ -0.47
CSMD2-204ENST00000373380 GPKOWQ92917 476 aaPredicted RBP eCLIP12.12□□□□□ -0.47
CSMD2-204ENST00000373380 ASAP1Q9ULH1 1129 aa12.12□□□□□ -0.47
CSMD2-204ENST00000373380 MYO5BQ9ULV0 1848 aa12.12□□□□□ -0.47
CSMD2-204ENST00000373380 M0R2C6 588 aa12.12□□□□□ -0.47
CSMD2-204ENST00000373380 GOLGA8HP0CJ92 632 aa12.12□□□□□ -0.47
CSMD2-204ENST00000373380 CCDC84Q86UT8 332 aaPredicted RBP12.12□□□□□ -0.47
CSMD2-204ENST00000373380 FAM212AQ96EL1 285 aa12.12□□□□□ -0.47
CSMD2-204ENST00000373380 ZSCAN10Q96SZ4 725 aaPredicted RBP12.12□□□□□ -0.47
CSMD2-204ENST00000373380 ANKRD26Q9UPS8 1709 aa12.12□□□□□ -0.47
CSMD2-204ENST00000373380 KLHL30Q0D2K2 578 aa12.11□□□□□ -0.47
CSMD2-204ENST00000373380 NR5A1Q13285 461 aa12.11□□□□□ -0.47
CSMD2-204ENST00000373380 TRAPPC3LQ5T215 181 aa12.11□□□□□ -0.47
CSMD2-204ENST00000373380 RBM26Q5T8P6 1007 aaKnown RBP12.11□□□□□ -0.47
CSMD2-204ENST00000373380 ANKRD13CQ8N6S4 541 aa12.11□□□□□ -0.47
CSMD2-204ENST00000373380 PUS7LQ9H0K6 701 aaKnown RBP12.11□□□□□ -0.47
CSMD2-204ENST00000373380 BIN2Q9UBW5 565 aaPredicted RBP12.11□□□□□ -0.47
CSMD2-204ENST00000373380 CRB1P82279 1406 aa12.11□□□□□ -0.47
CSMD2-204ENST00000373380 SMCO2A6NFE2 343 aa12.11□□□□□ -0.47
CSMD2-204ENST00000373380 EPB41P11171 864 aaKnown RBP12.11□□□□□ -0.47
CSMD2-204ENST00000373380 CALCOCO2Q13137 446 aa12.11□□□□□ -0.47
CSMD2-204ENST00000373380 MORC3Q14149 939 aa12.11□□□□□ -0.47
CSMD2-204ENST00000373380 PPP1R7Q15435 360 aa12.11□□□□□ -0.47
CSMD2-204ENST00000373380 CALCRLQ16602 461 aa12.11□□□□□ -0.47
CSMD2-204ENST00000373380 PTPROQ16827 1216 aa12.11□□□□□ -0.47
CSMD2-204ENST00000373380 SARNPP82979 210 aaKnown RBP12.11□□□□□ -0.47
CSMD2-204ENST00000373380 RESTQ13127 1097 aa12.11□□□□□ -0.47
CSMD2-204ENST00000373380 EPHA10Q5JZY3 1008 aa12.11□□□□□ -0.47
CSMD2-204ENST00000373380 NCAPH2Q6IBW4 605 aa12.11□□□□□ -0.47
CSMD2-204ENST00000373380 ANKS4BQ8N8V4 417 aa12.11□□□□□ -0.47
CSMD2-204ENST00000373380 SYMPKQ92797 1274 aaKnown RBP12.11□□□□□ -0.47
CSMD2-204ENST00000373380 PPP1R13BQ96KQ4 1090 aa12.11□□□□□ -0.47
CSMD2-204ENST00000373380 NSRP1Q9H0G5 558 aaKnown RBP12.11□□□□□ -0.47
CSMD2-204ENST00000373380 MTRF1LQ9UGC7 380 aaKnown RBP12.11□□□□□ -0.47
CSMD2-204ENST00000373380 ATP1A3P13637 1013 aa12.11□□□□□ -0.47
CSMD2-204ENST00000373380 SLC1A4P43007 532 aa12.11□□□□□ -0.47
CSMD2-204ENST00000373380 KIF23Q02241 960 aaPredicted RBP12.11□□□□□ -0.47
CSMD2-204ENST00000373380 UBE3CQ15386 1083 aa12.11□□□□□ -0.47
CSMD2-204ENST00000373380 ZYXQ15942 572 aaKnown RBP12.11□□□□□ -0.47
CSMD2-204ENST00000373380 SPATA1Q5VX52 437 aa12.11□□□□□ -0.47
CSMD2-204ENST00000373380 MSL1Q68DK7 614 aa12.11□□□□□ -0.47
CSMD2-204ENST00000373380 BLIDQ8IZY5 108 aa12.11□□□□□ -0.47
CSMD2-204ENST00000373380 PNMA1Q8ND90 353 aa12.11□□□□□ -0.47
CSMD2-204ENST00000373380 CSRNP2Q9H175 543 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms