RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 LAMB1P07942 1786 aa27.18■■□□□ 1.94
CDK9-201ENST00000373264 PRKCSHP14314 528 aaPredicted RBP27.18■■□□□ 1.94
CDK9-201ENST00000373264 ZNF18P17022 549 aa27.18■■□□□ 1.94
CDK9-201ENST00000373264 CDC25AP30304 524 aa27.18■■□□□ 1.94
CDK9-201ENST00000373264 ELOA2Q8IYF1 753 aaPredicted RBP27.18■■□□□ 1.94
CDK9-201ENST00000373264 SPATA20Q8TB22 786 aa27.18■■□□□ 1.94
CDK9-201ENST00000373264 CCDC94Q9BW85 323 aaPredicted RBP27.18■■□□□ 1.94
CDK9-201ENST00000373264 MKRN1Q9UHC7 482 aaKnown RBP27.18■■□□□ 1.94
CDK9-201ENST00000373264 SAP30BPQ9UHR5 308 aaKnown RBP27.18■■□□□ 1.94
CDK9-201ENST00000373264 RFC4P35249 363 aa27.17■■□□□ 1.94
CDK9-201ENST00000373264 SLC35G1Q2M3R5 365 aa27.17■■□□□ 1.94
CDK9-201ENST00000373264 LRRN4CLQ8ND94 238 aa27.17■■□□□ 1.94
CDK9-201ENST00000373264 KCND1Q9NSA2 647 aa27.17■■□□□ 1.94
CDK9-201ENST00000373264 FAM205AQ6ZU69 1335 aa27.17■■□□□ 1.94
CDK9-201ENST00000373264 TOM1O60784 492 aa27.17■■□□□ 1.94
CDK9-201ENST00000373264 PCP11498 1178 aaKnown RBP27.17■■□□□ 1.94
CDK9-201ENST00000373264 CDK11BP21127 795 aaKnown RBP27.17■■□□□ 1.94
CDK9-201ENST00000373264 USP5P45974 858 aa27.17■■□□□ 1.94
CDK9-201ENST00000373264 TYW1BQ6NUM6 668 aa27.17■■□□□ 1.94
CDK9-201ENST00000373264 FAM196AQ6ZSG2 479 aa27.17■■□□□ 1.94
CDK9-201ENST00000373264 CCDC88AQ3V6T2 1871 aa27.17■■□□□ 1.94
CDK9-201ENST00000373264 SPDYE4A6NLX3 237 aa27.16■■□□□ 1.94
CDK9-201ENST00000373264 CBFA2T2O43439 604 aa27.16■■□□□ 1.94
CDK9-201ENST00000373264 SBK1Q52WX2 424 aa27.16■■□□□ 1.94
CDK9-201ENST00000373264 MLKLQ8NB16 471 aa27.16■■□□□ 1.94
CDK9-201ENST00000373264 BLZF1Q9H2G9 400 aa27.16■■□□□ 1.94
CDK9-201ENST00000373264 PDS5AQ29RF7 1337 aaKnown RBP27.16■■□□□ 1.94
CDK9-201ENST00000373264 LDHBP07195 334 aaKnown RBP27.16■■□□□ 1.94
CDK9-201ENST00000373264 PLCD1P51178 756 aa27.16■■□□□ 1.94
CDK9-201ENST00000373264 ADKP55263 362 aaKnown RBP27.16■■□□□ 1.94
CDK9-201ENST00000373264 C12orf60Q5U649 245 aa27.16■■□□□ 1.94
CDK9-201ENST00000373264 TGFBRAP1Q8WUH2 860 aa27.16■■□□□ 1.94
CDK9-201ENST00000373264 CPVLQ9H3G5 476 aa27.16■■□□□ 1.94
CDK9-201ENST00000373264 USP21Q9UK80 565 aa27.16■■□□□ 1.94
CDK9-201ENST00000373264 SBF2Q86WG5 1849 aa27.16■■□□□ 1.94
CDK9-201ENST00000373264 FANCGO15287 622 aa27.15■■□□□ 1.94
CDK9-201ENST00000373264 SLFN14P0C7P3 912 aa27.15■■□□□ 1.94
CDK9-201ENST00000373264 PFKFB3Q16875 520 aaPredicted RBP27.15■■□□□ 1.94
CDK9-201ENST00000373264 TMEM139Q8IV31 216 aa27.15■■□□□ 1.94
CDK9-201ENST00000373264 BRMS1Q9HCU9 246 aa27.15■■□□□ 1.94
CDK9-201ENST00000373264 DPYDQ12882 1025 aa27.14■■□□□ 1.94
CDK9-201ENST00000373264 MAPKAPK5Q8IW41 473 aa27.14■■□□□ 1.94
CDK9-201ENST00000373264 KIF18AQ8NI77 898 aa27.14■■□□□ 1.94
CDK9-201ENST00000373264 ENOX1Q8TC92 643 aaKnown RBP27.14■■□□□ 1.94
CDK9-201ENST00000373264 TMX1Q9H3N1 280 aa27.14■■□□□ 1.94
CDK9-201ENST00000373264 LRRC4BQ9NT99 713 aa27.14■■□□□ 1.94
CDK9-201ENST00000373264 CBX1P83916 185 aa27.14■■□□□ 1.93
CDK9-201ENST00000373264 GLIPR1L2Q4G1C9 344 aa27.14■■□□□ 1.93
CDK9-201ENST00000373264 SH3RF1Q7Z6J0 888 aa27.14■■□□□ 1.93
CDK9-201ENST00000373264 ATP2C1P98194 919 aaPredicted RBP27.13■■□□□ 1.93
CDK9-201ENST00000373264 PNMA1Q8ND90 353 aa27.13■■□□□ 1.93
CDK9-201ENST00000373264 KAT14Q9H8E8 782 aa27.13■■□□□ 1.93
CDK9-201ENST00000373264 TEX33O43247 280 aa27.13■■□□□ 1.93
CDK9-201ENST00000373264 GRAPQ13588 217 aa27.13■■□□□ 1.93
CDK9-201ENST00000373264 TRAPPC3LQ5T215 181 aa27.13■■□□□ 1.93
CDK9-201ENST00000373264 GRAPLQ8TC17 118 aaPredicted RBP27.13■■□□□ 1.93
CDK9-201ENST00000373264 MTRQ99707 1265 aa27.13■■□□□ 1.93
CDK9-201ENST00000373264 PSDA5PKW4 1024 aaPredicted RBP27.12■■□□□ 1.93
CDK9-201ENST00000373264 GOLGA8HP0CJ92 632 aa27.12■■□□□ 1.93
CDK9-201ENST00000373264 XDHP47989 1333 aa27.12■■□□□ 1.93
CDK9-201ENST00000373264 UBAP1LF5GYI3 381 aa27.12■■□□□ 1.93
CDK9-201ENST00000373264 CNBD1Q8NA66 436 aa27.12■■□□□ 1.93
CDK9-201ENST00000373264 PRDM10Q9NQV6 1147 aa27.12■■□□□ 1.93
CDK9-201ENST00000373264 GPSM2P81274 684 aa27.11■■□□□ 1.93
CDK9-201ENST00000373264 TBX2Q13207 712 aaPredicted RBP27.11■■□□□ 1.93
CDK9-201ENST00000373264 KANK3Q6NY19 840 aa27.11■■□□□ 1.93
CDK9-201ENST00000373264 FERMT2Q96AC1 680 aa27.11■■□□□ 1.93
CDK9-201ENST00000373264 MKNK2Q9HBH9 465 aa27.11■■□□□ 1.93
CDK9-201ENST00000373264 HOMER1Q86YM7 354 aa27.11■■□□□ 1.93
CDK9-201ENST00000373264 FNBP4Q8N3X1 1017 aaPredicted RBP27.11■■□□□ 1.93
CDK9-201ENST00000373264 RGL2O15211 777 aa27.1■■□□□ 1.93
CDK9-201ENST00000373264 CYTH3O43739 400 aa27.1■■□□□ 1.93
CDK9-201ENST00000373264 TRIML1Q8N9V2 468 aa27.1■■□□□ 1.93
CDK9-201ENST00000373264 MAST2Q6P0Q8 1798 aa27.1■■□□□ 1.93
CDK9-201ENST00000373264 CUL4BQ13620 913 aa27.1■■□□□ 1.93
CDK9-201ENST00000373264 FAM177A1Q8N128 213 aaPredicted RBP27.1■■□□□ 1.93
CDK9-201ENST00000373264 TC2NQ8N9U0 490 aa27.1■■□□□ 1.93
CDK9-201ENST00000373264 MAD2L2Q9UI95 211 aa27.1■■□□□ 1.93
CDK9-201ENST00000373264 TAF1LQ8IZX4 1826 aa27.1■■□□□ 1.93
CDK9-201ENST00000373264 E2F4Q16254 413 aa27.09■■□□□ 1.93
CDK9-201ENST00000373264 SPTY2D1Q68D10 685 aaPredicted RBP27.09■■□□□ 1.93
CDK9-201ENST00000373264 PRR5LQ6MZQ0 368 aa27.09■■□□□ 1.93
CDK9-201ENST00000373264 APTXQ7Z2E3 356 aaKnown RBP27.09■■□□□ 1.93
CDK9-201ENST00000373264 STX8Q9UNK0 236 aa27.09■■□□□ 1.93
CDK9-201ENST00000373264 REXO1L1PQ8IX06 675 aa27.09■■□□□ 1.93
CDK9-201ENST00000373264 PP2D1A8MPX8 630 aa27.08■■□□□ 1.93
CDK9-201ENST00000373264 PPP1R3GB7ZBB8 358 aa27.08■■□□□ 1.93
CDK9-201ENST00000373264 ELF2Q15723 593 aa27.08■■□□□ 1.93
CDK9-201ENST00000373264 DACH1Q9UI36 760 aa27.08■■□□□ 1.93
CDK9-201ENST00000373264 DNAI1Q9UI46 699 aa27.08■■□□□ 1.93
CDK9-201ENST00000373264 TSPY3P0CV98 308 aa27.08■■□□□ 1.93
CDK9-201ENST00000373264 TSPY8P0CW00 308 aa27.08■■□□□ 1.93
CDK9-201ENST00000373264 SPECC1LQ69YQ0 1117 aa27.08■■□□□ 1.93
CDK9-201ENST00000373264 TRIM65Q6PJ69 517 aa27.08■■□□□ 1.93
CDK9-201ENST00000373264 TOGARAM2Q6ZUX3 1019 aa27.08■■□□□ 1.93
CDK9-201ENST00000373264 WDR66Q8TBY9 1149 aa27.08■■□□□ 1.93
CDK9-201ENST00000373264 NR1I3Q14994 352 aa27.07■■□□□ 1.92
CDK9-201ENST00000373264 BLIDQ8IZY5 108 aa27.07■■□□□ 1.92
CDK9-201ENST00000373264 SYNRGQ9UMZ2 1314 aa27.07■■□□□ 1.92
CDK9-201ENST00000373264 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms