RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 MAP3K12Q12852 859 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 NNTQ13423 1086 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 PTGISQ16647 500 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 CCDC38Q502W7 563 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 DDX27Q96GQ7 796 aaKnown RBP11.87□□□□□ -0.51
TRERF1-203ENST00000372917 GPATCH3Q96I76 525 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 OCEL1Q9H607 264 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 ZWILCHQ9H900 591 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 ZNF510Q9Y2H8 683 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 TMEM98Q9Y2Y6 226 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 BACH1O14867 736 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 LSM1O15116 133 aaKnown RBP11.87□□□□□ -0.51
TRERF1-203ENST00000372917 MAP3K13O43283 966 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 SUPT3HO75486 399 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 ALOX15P16050 662 aaPredicted RBP11.87□□□□□ -0.51
TRERF1-203ENST00000372917 HPDP32754 393 aaPredicted RBP11.87□□□□□ -0.51
TRERF1-203ENST00000372917 TUBB2AQ13885 445 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 MAP7D1Q3KQU3 841 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 FBXO31Q5XUX0 539 aaPredicted RBP11.87□□□□□ -0.51
TRERF1-203ENST00000372917 SYNE3Q6ZMZ3 975 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 CPLX3Q8WVH0 158 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 CYFIP2Q96F07 1278 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 TUBB2BQ9BVA1 445 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 OSBPL3Q9H4L5 887 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 RABL2BQ9UNT1 228 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 ZC3H4Q9UPT8 1303 aaKnown RBP11.87□□□□□ -0.51
TRERF1-203ENST00000372917 LRRC7Q96NW7 1537 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 RIMS2Q9UQ26 1411 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 SOWAHDA6NJG2 315 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 FAM200BP0CF97 657 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 GNAQP50148 359 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 CCDC155Q8N6L0 562 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 ATP11CQ8NB49 1132 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 SLC5A4Q9NY91 659 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 CYP46A1Q9Y6A2 500 aa11.87□□□□□ -0.51
TRERF1-203ENST00000372917 SKOR1P84550 965 aa11.86□□□□□ -0.51
TRERF1-203ENST00000372917 CBX3Q13185 183 aa11.86□□□□□ -0.51
TRERF1-203ENST00000372917 XRCC4Q13426 336 aa11.86□□□□□ -0.51
TRERF1-203ENST00000372917 VSTM4Q8IW00 320 aa11.86□□□□□ -0.51
TRERF1-203ENST00000372917 LMNTD2Q8IXW0 634 aa11.86□□□□□ -0.51
TRERF1-203ENST00000372917 CCHCR1Q8TD31 782 aa11.86□□□□□ -0.51
TRERF1-203ENST00000372917 IL25Q9H293 177 aa11.86□□□□□ -0.51
TRERF1-203ENST00000372917 UTP6Q9NYH9 597 aaKnown RBP11.86□□□□□ -0.51
TRERF1-203ENST00000372917 ARAP3Q8WWN8 1544 aa11.86□□□□□ -0.51
TRERF1-203ENST00000372917 A0A0G2JS52 829 aa11.86□□□□□ -0.51
TRERF1-203ENST00000372917 NBPF7P0C2Y1 421 aaPredicted RBP11.86□□□□□ -0.51
TRERF1-203ENST00000372917 OGFOD1Q8N543 542 aa11.86□□□□□ -0.51
TRERF1-203ENST00000372917 TEKT1Q969V4 418 aa11.86□□□□□ -0.51
TRERF1-203ENST00000372917 RRP36Q96EU6 259 aaKnown RBP11.86□□□□□ -0.51
TRERF1-203ENST00000372917 FGD4Q96M96 766 aa11.86□□□□□ -0.51
TRERF1-203ENST00000372917 SIL1Q9H173 461 aa11.86□□□□□ -0.51
TRERF1-203ENST00000372917 LNPEPQ9UIQ6 1025 aa11.86□□□□□ -0.51
TRERF1-203ENST00000372917 ADGRB1O14514 1584 aa11.86□□□□□ -0.51
TRERF1-203ENST00000372917 GLI2P10070 1586 aa11.86□□□□□ -0.51
TRERF1-203ENST00000372917 FAM107AO95990 144 aa11.86□□□□□ -0.51
TRERF1-203ENST00000372917 CNBD1Q8NA66 436 aa11.86□□□□□ -0.51
TRERF1-203ENST00000372917 BRD8Q9H0E9 1235 aa11.86□□□□□ -0.51
TRERF1-203ENST00000372917 ABCF2Q9UG63 623 aa11.86□□□□□ -0.51
TRERF1-203ENST00000372917 SPG7Q9UQ90 795 aa11.86□□□□□ -0.51
TRERF1-203ENST00000372917 SSH2Q76I76 1423 aa11.86□□□□□ -0.51
TRERF1-203ENST00000372917 GFPT2O94808 682 aa11.85□□□□□ -0.51
TRERF1-203ENST00000372917 TTMPQ5BVD1 217 aa11.85□□□□□ -0.51
TRERF1-203ENST00000372917 LCA5Q86VQ0 697 aa11.85□□□□□ -0.51
TRERF1-203ENST00000372917 NBPF15Q8N660 670 aa11.85□□□□□ -0.51
TRERF1-203ENST00000372917 AIMP1Q12904 312 aaKnown RBP11.85□□□□□ -0.51
TRERF1-203ENST00000372917 CCDC70Q6NSX1 233 aa11.85□□□□□ -0.51
TRERF1-203ENST00000372917 TMEM139Q8IV31 216 aa11.85□□□□□ -0.51
TRERF1-203ENST00000372917 CACNA2D3Q8IZS8 1091 aa11.85□□□□□ -0.51
TRERF1-203ENST00000372917 RUFY2Q8WXA3 655 aa11.85□□□□□ -0.51
TRERF1-203ENST00000372917 TCEANC2Q96MN5 208 aa11.85□□□□□ -0.51
TRERF1-203ENST00000372917 NDNQ99608 321 aa11.85□□□□□ -0.51
TRERF1-203ENST00000372917 INO80Q9ULG1 1556 aaPredicted RBP11.85□□□□□ -0.51
TRERF1-203ENST00000372917 MROH2AA6NES4 1674 aa11.85□□□□□ -0.51
TRERF1-203ENST00000372917 HNRNPCP07910 306 aaKnown RBP eCLIP11.85□□□□□ -0.51
TRERF1-203ENST00000372917 RNF220Q5VTB9 566 aa11.85□□□□□ -0.51
TRERF1-203ENST00000372917 UNC5CLQ8IV45 518 aa11.85□□□□□ -0.51
TRERF1-203ENST00000372917 ABTB1Q969K4 478 aaPredicted RBP11.85□□□□□ -0.51
TRERF1-203ENST00000372917 CORO1BQ9BR76 489 aa11.85□□□□□ -0.51
TRERF1-203ENST00000372917 PPP1R12CQ9BZL4 782 aa11.85□□□□□ -0.51
TRERF1-203ENST00000372917 PANK4Q9NVE7 773 aa11.85□□□□□ -0.51
TRERF1-203ENST00000372917 PHF24Q9UPV7 400 aa11.85□□□□□ -0.51
TRERF1-203ENST00000372917 NPATQ14207 1427 aa11.85□□□□□ -0.51
TRERF1-203ENST00000372917 KRT38O76015 456 aa11.84□□□□□ -0.51
TRERF1-203ENST00000372917 RPL13P26373 211 aaKnown RBP11.84□□□□□ -0.51
TRERF1-203ENST00000372917 TEFQ10587 303 aa11.84□□□□□ -0.51
TRERF1-203ENST00000372917 SLF2Q8IX21 1173 aa11.84□□□□□ -0.51
TRERF1-203ENST00000372917 CCDC65Q8IXS2 484 aa11.84□□□□□ -0.51
TRERF1-203ENST00000372917 MTA3Q9BTC8 594 aa11.84□□□□□ -0.51
TRERF1-203ENST00000372917 USH1CQ9Y6N9 552 aa11.84□□□□□ -0.51
TRERF1-203ENST00000372917 F8VZ95 297 aa11.84□□□□□ -0.51
TRERF1-203ENST00000372917 TUBP50607 506 aa11.84□□□□□ -0.51
TRERF1-203ENST00000372917 INHBCP55103 352 aa11.84□□□□□ -0.51
TRERF1-203ENST00000372917 ANKRD20A2Q5SQ80 823 aa11.84□□□□□ -0.51
TRERF1-203ENST00000372917 ANKRD20A1Q5TYW2 823 aa11.84□□□□□ -0.51
TRERF1-203ENST00000372917 ANKRD20A3Q5VUR7 823 aa11.84□□□□□ -0.51
TRERF1-203ENST00000372917 CRELD2Q6UXH1 353 aaPredicted RBP11.84□□□□□ -0.51
TRERF1-203ENST00000372917 LONP2Q86WA8 852 aa11.84□□□□□ -0.51
TRERF1-203ENST00000372917 WDR66Q8TBY9 1149 aa11.84□□□□□ -0.51
TRERF1-203ENST00000372917 NAF1Q96HR8 494 aaKnown RBP11.84□□□□□ -0.51
TRERF1-203ENST00000372917 ATXN10Q9UBB4 475 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms