RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 LEMD3Q9Y2U8 911 aa19.42■□□□□ 0.7
VEGFA-205ENST00000372067 AKAP11Q9UKA4 1901 aa19.42■□□□□ 0.7
VEGFA-205ENST00000372067 GTF2IP78347 998 aa19.42■□□□□ 0.7
VEGFA-205ENST00000372067 POSTNQ15063 836 aa19.42■□□□□ 0.7
VEGFA-205ENST00000372067 SEC23AQ15436 765 aa19.42■□□□□ 0.7
VEGFA-205ENST00000372067 RESP18Q5W5W9 173 aa19.42■□□□□ 0.7
VEGFA-205ENST00000372067 USP49Q70CQ1 688 aa19.42■□□□□ 0.7
VEGFA-205ENST00000372067 RASGRP4Q8TDF6 673 aa19.42■□□□□ 0.7
VEGFA-205ENST00000372067 EIF6P56537 245 aaKnown RBP19.42■□□□□ 0.7
VEGFA-205ENST00000372067 TMED8Q6PL24 325 aaPredicted RBP19.42■□□□□ 0.7
VEGFA-205ENST00000372067 RBM6P78332 1123 aaKnown RBP19.41■□□□□ 0.7
VEGFA-205ENST00000372067 MRFAP1L1Q96HT8 127 aa19.41■□□□□ 0.7
VEGFA-205ENST00000372067 TRPC5Q9UL62 973 aaPredicted RBP19.41■□□□□ 0.7
VEGFA-205ENST00000372067 TOB1P50616 345 aaPredicted RBP19.41■□□□□ 0.7
VEGFA-205ENST00000372067 EPSTI1Q96J88 318 aa19.41■□□□□ 0.7
VEGFA-205ENST00000372067 PLIN2Q99541 437 aa19.41■□□□□ 0.7
VEGFA-205ENST00000372067 CPVLQ9H3G5 476 aa19.41■□□□□ 0.7
VEGFA-205ENST00000372067 ZNF446Q9NWS9 450 aa19.41■□□□□ 0.7
VEGFA-205ENST00000372067 FAM193AP78312 1265 aa19.41■□□□□ 0.7
VEGFA-205ENST00000372067 PPP2R5BQ15173 497 aa19.41■□□□□ 0.7
VEGFA-205ENST00000372067 TMTC3Q6ZXV5 915 aa19.41■□□□□ 0.7
VEGFA-205ENST00000372067 FAM177A1Q8N128 213 aaPredicted RBP19.41■□□□□ 0.7
VEGFA-205ENST00000372067 KRT222Q8N1A0 295 aa19.41■□□□□ 0.7
VEGFA-205ENST00000372067 ZNF622Q969S3 477 aaKnown RBP eCLIP19.41■□□□□ 0.72e-13■□□□□ 10.3
VEGFA-205ENST00000372067 MAP3K14Q99558 947 aa19.41■□□□□ 0.7
VEGFA-205ENST00000372067 CASP1P29466 404 aa19.4■□□□□ 0.7
VEGFA-205ENST00000372067 RBM5P52756 815 aaKnown RBP eCLIP19.4■□□□□ 0.71e-9■□□□□ 9.1
VEGFA-205ENST00000372067 LRRC8AQ8IWT6 810 aa19.4■□□□□ 0.7
VEGFA-205ENST00000372067 SRBD1Q8N5C6 995 aaKnown RBP19.4■□□□□ 0.7
VEGFA-205ENST00000372067 PRPF3O43395 683 aaKnown RBP19.4■□□□□ 0.7
VEGFA-205ENST00000372067 CBFA2T2O43439 604 aa19.4■□□□□ 0.7
VEGFA-205ENST00000372067 TOP1P11387 765 aaKnown RBP19.4■□□□□ 0.7
VEGFA-205ENST00000372067 SCG2P13521 617 aa19.4■□□□□ 0.7
VEGFA-205ENST00000372067 CYP2C19P33261 490 aa19.4■□□□□ 0.7
VEGFA-205ENST00000372067 PTPN14Q15678 1187 aa19.4■□□□□ 0.7
VEGFA-205ENST00000372067 GRIK5Q16478 980 aa19.4■□□□□ 0.7
VEGFA-205ENST00000372067 NOM1Q5C9Z4 860 aaKnown RBP19.4■□□□□ 0.7
VEGFA-205ENST00000372067 FANCLQ9NW38 375 aa19.4■□□□□ 0.7
VEGFA-205ENST00000372067 MPHOSPH10O00566 681 aaKnown RBP19.39■□□□□ 0.7
VEGFA-205ENST00000372067 DDAH1O94760 285 aa19.39■□□□□ 0.7
VEGFA-205ENST00000372067 FNBP4Q8N3X1 1017 aaPredicted RBP19.39■□□□□ 0.7
VEGFA-205ENST00000372067 LRRC4BQ9NT99 713 aa19.39■□□□□ 0.7
VEGFA-205ENST00000372067 DACH1Q9UI36 760 aa19.39■□□□□ 0.7
VEGFA-205ENST00000372067 ANAPC4Q9UJX5 808 aa19.39■□□□□ 0.7
VEGFA-205ENST00000372067 HSPA1LP34931 641 aa19.39■□□□□ 0.69
VEGFA-205ENST00000372067 ZNF287Q9HBT7 754 aa19.39■□□□□ 0.69
VEGFA-205ENST00000372067 TXLNAP40222 546 aa19.39■□□□□ 0.69
VEGFA-205ENST00000372067 GSDMDP57764 484 aa19.39■□□□□ 0.69
VEGFA-205ENST00000372067 PTGDRQ13258 359 aa19.39■□□□□ 0.69
VEGFA-205ENST00000372067 DHX8Q14562 1220 aaKnown RBP19.39■□□□□ 0.69
VEGFA-205ENST00000372067 NBPF11Q86T75 865 aa19.39■□□□□ 0.69
VEGFA-205ENST00000372067 METTL16Q86W50 562 aaKnown RBP19.39■□□□□ 0.69
VEGFA-205ENST00000372067 TAF1P21675 1872 aa19.39■□□□□ 0.69
VEGFA-205ENST00000372067 PTPREP23469 700 aa19.38■□□□□ 0.69
VEGFA-205ENST00000372067 SOGA3Q5TF21 947 aa19.38■□□□□ 0.69
VEGFA-205ENST00000372067 MSL1Q68DK7 614 aa19.38■□□□□ 0.69
VEGFA-205ENST00000372067 CCDC112Q8NEF3 446 aa19.38■□□□□ 0.69
VEGFA-205ENST00000372067 ZC3H12CQ9C0D7 883 aaKnown RBP19.38■□□□□ 0.69
VEGFA-205ENST00000372067 CD209Q9NNX6 404 aa19.38■□□□□ 0.69
VEGFA-205ENST00000372067 PLCH1Q4KWH8 1693 aa19.38■□□□□ 0.69
VEGFA-205ENST00000372067 COL1A1P02452 1464 aaPredicted RBP19.38■□□□□ 0.69
VEGFA-205ENST00000372067 TRIM66O15016 1216 aa19.38■□□□□ 0.69
VEGFA-205ENST00000372067 CDC25AP30304 524 aa19.38■□□□□ 0.69
VEGFA-205ENST00000372067 TROAPQ12815 778 aa19.38■□□□□ 0.69
VEGFA-205ENST00000372067 DOK7Q18PE1 504 aa19.38■□□□□ 0.69
VEGFA-205ENST00000372067 NWD2Q9ULI1 1742 aa19.38■□□□□ 0.69
VEGFA-205ENST00000372067 COBLO75128 1261 aa19.38■□□□□ 0.69
VEGFA-205ENST00000372067 TNNT3P45378 269 aaPredicted RBP19.38■□□□□ 0.69
VEGFA-205ENST00000372067 GOLGA8FQ08AF8 430 aa19.38■□□□□ 0.69
VEGFA-205ENST00000372067 GOLGA8DPQ0D2H9 430 aa19.38■□□□□ 0.69
VEGFA-205ENST00000372067 KMT5BQ4FZB7 885 aa19.38■□□□□ 0.69
VEGFA-205ENST00000372067 MARCH6O60337 910 aa19.37■□□□□ 0.69
VEGFA-205ENST00000372067 STAG2Q8N3U4 1231 aa19.37■□□□□ 0.69
VEGFA-205ENST00000372067 CPLX3Q8WVH0 158 aa19.37■□□□□ 0.69
VEGFA-205ENST00000372067 SYMPKQ92797 1274 aaKnown RBP19.37■□□□□ 0.69
VEGFA-205ENST00000372067 BCL9LQ86UU0 1499 aa19.37■□□□□ 0.69
VEGFA-205ENST00000372067 MYH7P12883 1935 aa19.37■□□□□ 0.69
VEGFA-205ENST00000372067 NEMFO60524 1076 aa19.37■□□□□ 0.69
VEGFA-205ENST00000372067 EARS2Q5JPH6 523 aaKnown RBP19.37■□□□□ 0.69
VEGFA-205ENST00000372067 BLZF1Q9H2G9 400 aa19.37■□□□□ 0.69
VEGFA-205ENST00000372067 FBXO2Q9UK22 296 aaPredicted RBP19.37■□□□□ 0.69
VEGFA-205ENST00000372067 NFE2L3Q9Y4A8 694 aa19.37■□□□□ 0.69
VEGFA-205ENST00000372067 PCP11498 1178 aaKnown RBP19.37■□□□□ 0.69
VEGFA-205ENST00000372067 ATP2B4P23634 1241 aa19.37■□□□□ 0.69
VEGFA-205ENST00000372067 GTF2A1P52655 376 aaPredicted RBP19.37■□□□□ 0.69
VEGFA-205ENST00000372067 SARM1Q6SZW1 724 aa19.37■□□□□ 0.69
VEGFA-205ENST00000372067 ZSCAN29Q8IWY8 852 aaPredicted RBP19.37■□□□□ 0.69
VEGFA-205ENST00000372067 EYA3Q99504 573 aa19.37■□□□□ 0.69
VEGFA-205ENST00000372067 LCMT1Q9UIC8 334 aa19.37■□□□□ 0.69
VEGFA-205ENST00000372067 SCNN1DP51172 638 aa19.36■□□□□ 0.69
VEGFA-205ENST00000372067 KANK3Q6NY19 840 aa19.36■□□□□ 0.69
VEGFA-205ENST00000372067 MTA3Q9BTC8 594 aa19.36■□□□□ 0.69
VEGFA-205ENST00000372067 ANKRD36CQ5JPF3 1778 aa19.36■□□□□ 0.69
VEGFA-205ENST00000372067 PLCD1P51178 756 aa19.36■□□□□ 0.69
VEGFA-205ENST00000372067 NAPAP54920 295 aa19.36■□□□□ 0.69
VEGFA-205ENST00000372067 CEP135Q66GS9 1140 aa19.36■□□□□ 0.69
VEGFA-205ENST00000372067 SEC63Q9UGP8 760 aaKnown RBP19.36■□□□□ 0.69
VEGFA-205ENST00000372067 TM4SF1P30408 202 aa19.35■□□□□ 0.69
VEGFA-205ENST00000372067 MAN1B1Q9UKM7 699 aa19.35■□□□□ 0.69
VEGFA-205ENST00000372067 SRPRBQ9Y5M8 271 aaKnown RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms