RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 SOX1O00570 391 aaPredicted RBP15.89■□□□□ 0.13
RPF1-201ENST00000370654 PTPREP23469 700 aa15.89■□□□□ 0.13
RPF1-201ENST00000370654 C12orf60Q5U649 245 aa15.89■□□□□ 0.13
RPF1-201ENST00000370654 CCAR1Q8IX12 1150 aaKnown RBP15.89■□□□□ 0.13
RPF1-201ENST00000370654 ANKLE1Q8NAG6 615 aa15.89■□□□□ 0.13
RPF1-201ENST00000370654 C11orf49Q9H6J7 331 aa15.89■□□□□ 0.13
RPF1-201ENST00000370654 IGHA2P01877 340 aa15.88■□□□□ 0.13
RPF1-201ENST00000370654 SYN1P17600 705 aa15.88■□□□□ 0.13
RPF1-201ENST00000370654 CDK8P49336 464 aa15.88■□□□□ 0.13
RPF1-201ENST00000370654 SPICE1Q8N0Z3 855 aa15.88■□□□□ 0.13
RPF1-201ENST00000370654 TRPV1Q8NER1 839 aa15.88■□□□□ 0.13
RPF1-201ENST00000370654 MOV10L1Q9BXT6 1211 aaKnown RBP15.88■□□□□ 0.13
RPF1-201ENST00000370654 LRRCC1Q9C099 1032 aa15.88■□□□□ 0.13
RPF1-201ENST00000370654 NBPF3Q9H094 633 aa15.88■□□□□ 0.13
RPF1-201ENST00000370654 SLC15A5A6NIM6 579 aa15.87■□□□□ 0.13
RPF1-201ENST00000370654 COL6A1P12109 1028 aa15.87■□□□□ 0.13
RPF1-201ENST00000370654 CAPN2P17655 700 aa15.87■□□□□ 0.13
RPF1-201ENST00000370654 GRB14Q14449 540 aa15.87■□□□□ 0.13
RPF1-201ENST00000370654 UBE3CQ15386 1083 aa15.87■□□□□ 0.13
RPF1-201ENST00000370654 CTR9Q6PD62 1173 aa15.87■□□□□ 0.13
RPF1-201ENST00000370654 TMEM179Q6ZVK1 233 aa15.87■□□□□ 0.13
RPF1-201ENST00000370654 ATP8A2Q9NTI2 1148 aa15.87■□□□□ 0.13
RPF1-201ENST00000370654 SLC4A4Q9Y6R1 1079 aa15.87■□□□□ 0.13
RPF1-201ENST00000370654 MYH7P12883 1935 aa15.87■□□□□ 0.13
RPF1-201ENST00000370654 CYP2C19P33261 490 aa15.87■□□□□ 0.13
RPF1-201ENST00000370654 CCNA1P78396 465 aa15.87■□□□□ 0.13
RPF1-201ENST00000370654 COG2Q14746 738 aa15.87■□□□□ 0.13
RPF1-201ENST00000370654 C16orf86Q6ZW13 317 aa15.87■□□□□ 0.13
RPF1-201ENST00000370654 TRMT44Q8IYL2 757 aaKnown RBP15.87■□□□□ 0.13
RPF1-201ENST00000370654 ATG4CQ96DT6 458 aa15.87■□□□□ 0.13
RPF1-201ENST00000370654 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.87■□□□□ 0.13
RPF1-201ENST00000370654 TANGO6Q9C0B7 1094 aa15.87■□□□□ 0.13
RPF1-201ENST00000370654 CWC22Q9HCG8 908 aaKnown RBP15.87■□□□□ 0.13
RPF1-201ENST00000370654 SWAP70Q9UH65 585 aa15.87■□□□□ 0.13
RPF1-201ENST00000370654 A0A0G2JMZ2 1700 aa15.86■□□□□ 0.13
RPF1-201ENST00000370654 COBLO75128 1261 aa15.86■□□□□ 0.13
RPF1-201ENST00000370654 DSG3P32926 999 aa15.86■□□□□ 0.13
RPF1-201ENST00000370654 ICA1Q05084 483 aa15.86■□□□□ 0.13
RPF1-201ENST00000370654 STK11IPQ8N1F8 1099 aa15.86■□□□□ 0.13
RPF1-201ENST00000370654 LRCH3Q96II8 777 aa15.86■□□□□ 0.13
RPF1-201ENST00000370654 GDF15Q99988 308 aa15.86■□□□□ 0.13
RPF1-201ENST00000370654 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.86■□□□□ 0.13
RPF1-201ENST00000370654 TMX2Q9Y320 296 aa15.86■□□□□ 0.13
RPF1-201ENST00000370654 FRMPD3Q5JV73 1810 aa15.85■□□□□ 0.13
RPF1-201ENST00000370654 MYH8P13535 1937 aa15.85■□□□□ 0.13
RPF1-201ENST00000370654 HOXC6P09630 235 aa15.85■□□□□ 0.13
RPF1-201ENST00000370654 EEF2P13639 858 aaKnown RBP15.85■□□□□ 0.13
RPF1-201ENST00000370654 ERCC3P19447 782 aa15.85■□□□□ 0.13
RPF1-201ENST00000370654 MAPK8IP2Q13387 824 aaPredicted RBP15.85■□□□□ 0.13
RPF1-201ENST00000370654 LRRC26Q2I0M4 334 aa15.85■□□□□ 0.13
RPF1-201ENST00000370654 SAMD1Q6SPF0 538 aaPredicted RBP15.85■□□□□ 0.13
RPF1-201ENST00000370654 OSBP2Q969R2 916 aa15.85■□□□□ 0.13
RPF1-201ENST00000370654 STRBPQ96SI9 672 aaKnown RBP15.85■□□□□ 0.13
RPF1-201ENST00000370654 SPATC1LQ9H0A9 340 aa15.85■□□□□ 0.13
RPF1-201ENST00000370654 DCTPP1Q9H773 170 aa15.85■□□□□ 0.13
RPF1-201ENST00000370654 VCPKMTQ9H867 229 aa15.85■□□□□ 0.13
RPF1-201ENST00000370654 ECHDC1Q9NTX5 307 aa15.85■□□□□ 0.13
RPF1-201ENST00000370654 FBXO28Q9NVF7 368 aa15.85■□□□□ 0.13
RPF1-201ENST00000370654 LAMA3Q16787 3333 aa15.84■□□□□ 0.13
RPF1-201ENST00000370654 PARP14Q460N5 1801 aa15.84■□□□□ 0.13
RPF1-201ENST00000370654 ADORA2AP29274 412 aa15.84■□□□□ 0.13
RPF1-201ENST00000370654 OTUD7AQ8TE49 926 aaPredicted RBP15.84■□□□□ 0.13
RPF1-201ENST00000370654 CHMP4BQ9H444 224 aaKnown RBP15.84■□□□□ 0.13
RPF1-201ENST00000370654 HOXC10Q9NYD6 342 aa15.84■□□□□ 0.13
RPF1-201ENST00000370654 PCDHB15Q9Y5E8 787 aa15.84■□□□□ 0.13
RPF1-201ENST00000370654 GSG1L2A8MUP6 293 aa15.83■□□□□ 0.12
RPF1-201ENST00000370654 FLOT1O75955 427 aa15.83■□□□□ 0.12
RPF1-201ENST00000370654 GLRX3O76003 335 aaKnown RBP15.83■□□□□ 0.12
RPF1-201ENST00000370654 MAGEA10P43363 369 aaPredicted RBP15.83■□□□□ 0.12
RPF1-201ENST00000370654 ATP2B2Q01814 1243 aa15.83■□□□□ 0.12
RPF1-201ENST00000370654 TMEM132BQ14DG7 1078 aa15.83■□□□□ 0.12
RPF1-201ENST00000370654 PRAMEF19Q5SWL8 479 aa15.83■□□□□ 0.12
RPF1-201ENST00000370654 MFSD14CQ5VZR4 134 aa15.83■□□□□ 0.12
RPF1-201ENST00000370654 IVNS1ABPQ9Y6Y0 642 aa15.83■□□□□ 0.12
RPF1-201ENST00000370654 M0R2C6 588 aa15.82■□□□□ 0.12
RPF1-201ENST00000370654 CYBAP13498 195 aa15.82■□□□□ 0.12
RPF1-201ENST00000370654 CNGA1P29973 690 aa15.82■□□□□ 0.12
RPF1-201ENST00000370654 PLS1Q14651 629 aa15.82■□□□□ 0.12
RPF1-201ENST00000370654 ANO1Q5XXA6 986 aa15.82■□□□□ 0.12
RPF1-201ENST00000370654 LPAR1Q92633 364 aa15.82■□□□□ 0.12
RPF1-201ENST00000370654 CCDC17Q96LX7 622 aa15.82■□□□□ 0.12
RPF1-201ENST00000370654 ARHGEF10LQ9HCE6 1279 aa15.82■□□□□ 0.12
RPF1-201ENST00000370654 EPB41L4AQ9HCS5 686 aaPredicted RBP15.82■□□□□ 0.12
RPF1-201ENST00000370654 DDX20Q9UHI6 824 aaKnown RBP15.82■□□□□ 0.12
RPF1-201ENST00000370654 COL11A1P12107 1806 aaPredicted RBP15.81■□□□□ 0.12
RPF1-201ENST00000370654 RASA1P20936 1047 aa15.81■□□□□ 0.12
RPF1-201ENST00000370654 DPP9Q86TI2 863 aa15.81■□□□□ 0.12
RPF1-201ENST00000370654 NCAPG2Q86XI2 1143 aa15.81■□□□□ 0.12
RPF1-201ENST00000370654 KBTBD3Q8NAB2 608 aa15.81■□□□□ 0.12
RPF1-201ENST00000370654 SHCBP1Q8NEM2 672 aa15.81■□□□□ 0.12
RPF1-201ENST00000370654 NUP88Q99567 741 aaPredicted RBP15.81■□□□□ 0.12
RPF1-201ENST00000370654 ADAMTS5Q9UNA0 930 aa15.81■□□□□ 0.12
RPF1-201ENST00000370654 GREB1LQ9C091 1923 aaPredicted RBP15.81■□□□□ 0.12
RPF1-201ENST00000370654 ZNF236Q9UL36 1845 aa15.81■□□□□ 0.12
RPF1-201ENST00000370654 WDR46O15213 610 aaKnown RBP15.8■□□□□ 0.12
RPF1-201ENST00000370654 BMP8BP34820 402 aa15.8■□□□□ 0.12
RPF1-201ENST00000370654 FAM83BQ5T0W9 1011 aa15.8■□□□□ 0.12
RPF1-201ENST00000370654 ZSCAN25Q6NSZ9 544 aa15.8■□□□□ 0.12
RPF1-201ENST00000370654 SEC62Q99442 399 aaKnown RBP15.8■□□□□ 0.12
RPF1-201ENST00000370654 SENP6Q9GZR1 1112 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms