RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 CNTNAP4Q9C0A0 1308 aa8.06□□□□□ -1.12
TGFBR3-202ENST00000370399 ABCC12Q96J65 1359 aa8.06□□□□□ -1.12
TGFBR3-202ENST00000370399 CCP110O43303 1012 aa8.06□□□□□ -1.12
TGFBR3-202ENST00000370399 TRIM21P19474 475 aaKnown RBP8.06□□□□□ -1.12
TGFBR3-202ENST00000370399 KARSQ15046 597 aaKnown RBP8.06□□□□□ -1.12
TGFBR3-202ENST00000370399 FBXO33Q7Z6M2 555 aa8.06□□□□□ -1.12
TGFBR3-202ENST00000370399 KIAA1328Q86T90 577 aa8.06□□□□□ -1.12
TGFBR3-202ENST00000370399 TMEM87AQ8NBN3 555 aa8.06□□□□□ -1.12
TGFBR3-202ENST00000370399 ZBTB9Q96C00 473 aa8.06□□□□□ -1.12
TGFBR3-202ENST00000370399 MMRN2Q9H8L6 949 aa8.06□□□□□ -1.12
TGFBR3-202ENST00000370399 HOMER2Q9NSB8 354 aa8.06□□□□□ -1.12
TGFBR3-202ENST00000370399 FANCLQ9NW38 375 aa8.06□□□□□ -1.12
TGFBR3-202ENST00000370399 CTNND2Q9UQB3 1225 aa8.06□□□□□ -1.12
TGFBR3-202ENST00000370399 FAM205CA6NFA0 338 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 GYS1P13807 737 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 PLCD1P51178 756 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 SNW1Q13573 536 aaKnown RBP8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 PLS1Q14651 629 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 NWD1Q149M9 1564 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 HS1BP3Q53T59 392 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 FKBP15Q5T1M5 1219 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 TNS2Q63HR2 1409 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 STAG2Q8N3U4 1231 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 CSRNP1Q96S65 589 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 FOXP1Q9H334 677 aaPredicted RBP8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 TDRD3Q9H7E2 651 aaKnown RBP8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 LTN1O94822 1766 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 ZBTB7AO95365 584 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 ADCY7P51828 1080 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 GNG11P61952 73 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 TMEM132AQ24JP5 1023 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 TDRD12Q587J7 1177 aaKnown RBP8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 CCDC174Q6PII3 467 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 MIGA2Q7L4E1 593 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 CERS3Q8IU89 383 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 NIM1KQ8IY84 436 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 KCNB2Q92953 911 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 MASTLQ96GX5 879 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 ZNF512BQ96KM6 892 aaPredicted RBP8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 TMEM47Q9BQJ4 181 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 PYM1Q9BRP8 204 aaKnown RBP8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 SEPT11Q9NVA2 429 aaKnown RBP8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 RMND1Q9NWS8 449 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 LRWD1Q9UFC0 647 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 DNAI1Q9UI46 699 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 HPS5Q9UPZ3 1129 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 SLIT3O75094 1523 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 A0A1W2PQ27 194 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 A0A1W2PQ64 194 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 A0A1W2PQD8 194 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 NEMFO60524 1076 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 PCP11498 1178 aaKnown RBP8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 ICA1Q05084 483 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 PDE4DQ08499 809 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 AOC3Q16853 763 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 SLC27A3Q5K4L6 730 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 CEP135Q66GS9 1140 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 SGMS1Q86VZ5 419 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 KIFC2Q96AC6 838 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 COA1Q9GZY4 146 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 ALDH8A1Q9H2A2 487 aaPredicted RBP8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 TBC1D7Q9P0N9 293 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 SCAF8Q9UPN6 1271 aaKnown RBP8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 PNPLA7Q6ZV29 1317 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 SNAP25P60880 206 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 KIF4BQ2VIQ3 1234 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 VGLL2Q8N8G2 317 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 FERMT2Q96AC1 680 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 CEP95Q96GE4 821 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 TSG101Q99816 390 aa8.05□□□□□ -1.12
TGFBR3-202ENST00000370399 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.05□□□□□ -1.121e-7■■■■■ 29.1
TGFBR3-202ENST00000370399 CHD2O14647 1828 aaKnown RBP8.04□□□□□ -1.12
TGFBR3-202ENST00000370399 SNX29Q8TEQ0 813 aa8.04□□□□□ -1.12
TGFBR3-202ENST00000370399 TSC1Q92574 1164 aa8.04□□□□□ -1.12
TGFBR3-202ENST00000370399 LRRC4BQ9NT99 713 aa8.04□□□□□ -1.12
TGFBR3-202ENST00000370399 ZSCAN12O43309 604 aa8.04□□□□□ -1.12
TGFBR3-202ENST00000370399 UBXN1Q04323 297 aa8.04□□□□□ -1.12
TGFBR3-202ENST00000370399 SLFN13Q68D06 897 aa8.04□□□□□ -1.12
TGFBR3-202ENST00000370399 WWC2Q6AWC2 1192 aa8.04□□□□□ -1.12
TGFBR3-202ENST00000370399 TMTC3Q6ZXV5 915 aa8.04□□□□□ -1.12
TGFBR3-202ENST00000370399 KRT25Q7Z3Z0 450 aa8.04□□□□□ -1.12
TGFBR3-202ENST00000370399 TICAM2Q86XR7 235 aa8.04□□□□□ -1.12
TGFBR3-202ENST00000370399 TMEM232C9JQI7 657 aa8.04□□□□□ -1.12
TGFBR3-202ENST00000370399 PRPF3O43395 683 aaKnown RBP8.04□□□□□ -1.12
TGFBR3-202ENST00000370399 WDHD1O75717 1129 aaPredicted RBP8.04□□□□□ -1.12
TGFBR3-202ENST00000370399 CALCRLQ16602 461 aa8.04□□□□□ -1.12
TGFBR3-202ENST00000370399 CCDC150Q8NCX0 1101 aa8.04□□□□□ -1.12
TGFBR3-202ENST00000370399 UBXN4Q92575 508 aa8.04□□□□□ -1.12
TGFBR3-202ENST00000370399 PCDHA1Q9Y5I3 950 aa8.04□□□□□ -1.12
TGFBR3-202ENST00000370399 SETD1AO15047 1707 aaKnown RBP8.04□□□□□ -1.12
TGFBR3-202ENST00000370399 ARID5AQ03989 594 aa8.03□□□□□ -1.12
TGFBR3-202ENST00000370399 TNIP1Q15025 636 aa8.03□□□□□ -1.12
TGFBR3-202ENST00000370399 CABP7Q86V35 215 aa8.03□□□□□ -1.12
TGFBR3-202ENST00000370399 SRBD1Q8N5C6 995 aaKnown RBP8.03□□□□□ -1.12
TGFBR3-202ENST00000370399 MLKLQ8NB16 471 aa8.03□□□□□ -1.12
TGFBR3-202ENST00000370399 PSTPIP2Q9H939 334 aa8.03□□□□□ -1.12
TGFBR3-202ENST00000370399 LZTFL1Q9NQ48 299 aa8.03□□□□□ -1.12
TGFBR3-202ENST00000370399 USP17L5A8MUK1 530 aa8.03□□□□□ -1.12
TGFBR3-202ENST00000370399 DDX39AO00148 427 aaKnown RBP8.03□□□□□ -1.12
TGFBR3-202ENST00000370399 ATP1A3P13637 1013 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms