RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 GDF11O95390 407 aa20.08■□□□□ 0.8
UBE3D-203ENST00000369747 SART3Q15020 963 aaKnown RBP20.08■□□□□ 0.8
UBE3D-203ENST00000369747 CLEC10AQ8IUN9 316 aa20.08■□□□□ 0.8
UBE3D-203ENST00000369747 PPP1R9BQ96SB3 815 aa20.08■□□□□ 0.8
UBE3D-203ENST00000369747 RTN4Q9NQC3 1192 aaKnown RBP20.08■□□□□ 0.8
UBE3D-203ENST00000369747 PPP2R3BQ9Y5P8 575 aa20.08■□□□□ 0.8
UBE3D-203ENST00000369747 SSC5DA1L4H1 1573 aa20.07■□□□□ 0.8
UBE3D-203ENST00000369747 MPHOSPH10O00566 681 aaKnown RBP20.07■□□□□ 0.8
UBE3D-203ENST00000369747 CCDC173Q0VFZ6 552 aa20.07■□□□□ 0.8
UBE3D-203ENST00000369747 RCSD1Q6JBY9 416 aa20.07■□□□□ 0.8
UBE3D-203ENST00000369747 GLIS2Q9BZE0 524 aaPredicted RBP20.07■□□□□ 0.8
UBE3D-203ENST00000369747 ERICH2A1L162 156 aa20.06■□□□□ 0.8
UBE3D-203ENST00000369747 LIFRP42702 1097 aa20.06■□□□□ 0.8
UBE3D-203ENST00000369747 GUCY1B3Q02153 619 aa20.06■□□□□ 0.8
UBE3D-203ENST00000369747 WTAPQ15007 396 aa20.06■□□□□ 0.8
UBE3D-203ENST00000369747 APOA5Q6Q788 366 aa20.06■□□□□ 0.8
UBE3D-203ENST00000369747 SGMS1Q86VZ5 419 aa20.06■□□□□ 0.8
UBE3D-203ENST00000369747 CEP95Q96GE4 821 aa20.06■□□□□ 0.8
UBE3D-203ENST00000369747 MTA3Q9BTC8 594 aa20.06■□□□□ 0.8
UBE3D-203ENST00000369747 TAOK2Q9UL54 1235 aa20.06■□□□□ 0.8
UBE3D-203ENST00000369747 PHF20L1A8MW92 1017 aa20.06■□□□□ 0.8
UBE3D-203ENST00000369747 NT5C2P49902 561 aa20.06■□□□□ 0.8
UBE3D-203ENST00000369747 MAP1SQ66K74 1059 aaPredicted RBP20.06■□□□□ 0.8
UBE3D-203ENST00000369747 CCDC17Q96LX7 622 aa20.06■□□□□ 0.8
UBE3D-203ENST00000369747 TCP11L1Q9NUJ3 509 aa20.06■□□□□ 0.8
UBE3D-203ENST00000369747 ORC3Q9UBD5 711 aaPredicted RBP20.06■□□□□ 0.8
UBE3D-203ENST00000369747 PLIN4Q96Q06 1357 aa20.05■□□□□ 0.8
UBE3D-203ENST00000369747 CPLX1O14810 134 aa20.05■□□□□ 0.8
UBE3D-203ENST00000369747 LIG1P18858 919 aa20.05■□□□□ 0.8
UBE3D-203ENST00000369747 ANP32BQ92688 251 aaKnown RBP20.05■□□□□ 0.8
UBE3D-203ENST00000369747 PGBD1Q96JS3 809 aa20.05■□□□□ 0.8
UBE3D-203ENST00000369747 CFAP45Q9UL16 551 aa20.05■□□□□ 0.8
UBE3D-203ENST00000369747 STX8Q9UNK0 236 aa20.05■□□□□ 0.8
UBE3D-203ENST00000369747 GH2P01242 217 aa20.04■□□□□ 0.8
UBE3D-203ENST00000369747 METAP2P50579 478 aaKnown RBP eCLIP20.04■□□□□ 0.8
UBE3D-203ENST00000369747 ABCB5Q2M3G0 1257 aa20.04■□□□□ 0.8
UBE3D-203ENST00000369747 IFIT1BQ5T764 474 aaKnown RBP20.04■□□□□ 0.8
UBE3D-203ENST00000369747 NFXL1Q6ZNB6 911 aa20.04■□□□□ 0.8
UBE3D-203ENST00000369747 FAM43AQ8N2R8 423 aa20.04■□□□□ 0.8
UBE3D-203ENST00000369747 MYL10Q9BUA6 226 aa20.04■□□□□ 0.8
UBE3D-203ENST00000369747 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.04■□□□□ 0.8
UBE3D-203ENST00000369747 GREB1LQ9C091 1923 aaPredicted RBP20.04■□□□□ 0.8
UBE3D-203ENST00000369747 IGKV6D-41A0A0C4DH26 115 aa20.04■□□□□ 0.8
UBE3D-203ENST00000369747 GUCY1A2P33402 732 aa20.04■□□□□ 0.8
UBE3D-203ENST00000369747 PRKG1Q13976 671 aa20.04■□□□□ 0.8
UBE3D-203ENST00000369747 RNF214Q8ND24 703 aa20.04■□□□□ 0.8
UBE3D-203ENST00000369747 MTMR4Q9NYA4 1195 aa20.04■□□□□ 0.8
UBE3D-203ENST00000369747 RXRAP19793 462 aa20.03■□□□□ 0.8
UBE3D-203ENST00000369747 CDC27P30260 824 aa20.03■□□□□ 0.8
UBE3D-203ENST00000369747 SEPT2Q15019 361 aa20.03■□□□□ 0.8
UBE3D-203ENST00000369747 SUPT20HL1Q3ZLR7 823 aa20.03■□□□□ 0.8
UBE3D-203ENST00000369747 C8orf76Q96K31 380 aa20.03■□□□□ 0.8
UBE3D-203ENST00000369747 CCDC69A6NI79 296 aa20.02■□□□□ 0.8
UBE3D-203ENST00000369747 CAP2P40123 477 aa20.02■□□□□ 0.8
UBE3D-203ENST00000369747 FMR1Q06787 632 aaKnown RBP eCLIP20.02■□□□□ 0.8
UBE3D-203ENST00000369747 OTUD7BQ6GQQ9 843 aa20.02■□□□□ 0.8
UBE3D-203ENST00000369747 DGKHQ86XP1 1220 aa20.02■□□□□ 0.8
UBE3D-203ENST00000369747 FBXO18Q8NFZ0 1043 aa20.02■□□□□ 0.8
UBE3D-203ENST00000369747 CDCA5Q96FF9 252 aa20.02■□□□□ 0.8
UBE3D-203ENST00000369747 FUCA2Q9BTY2 467 aa20.02■□□□□ 0.8
UBE3D-203ENST00000369747 GOLGA6L4A6NEF3 574 aa20.02■□□□□ 0.79
UBE3D-203ENST00000369747 ZBTB43O43298 467 aa20.02■□□□□ 0.79
UBE3D-203ENST00000369747 DCAF15Q66K64 600 aa20.02■□□□□ 0.79
UBE3D-203ENST00000369747 ATL3Q6DD88 541 aa20.02■□□□□ 0.79
UBE3D-203ENST00000369747 TMEM179Q6ZVK1 233 aa20.02■□□□□ 0.79
UBE3D-203ENST00000369747 MICU3Q86XE3 530 aa20.02■□□□□ 0.79
UBE3D-203ENST00000369747 TMTC2Q8N394 836 aa20.02■□□□□ 0.79
UBE3D-203ENST00000369747 USP28Q96RU2 1077 aa20.02■□□□□ 0.79
UBE3D-203ENST00000369747 FTOQ9C0B1 505 aaKnown RBP eCLIP20.02■□□□□ 0.79
UBE3D-203ENST00000369747 RCOR1Q9UKL0 485 aa20.02■□□□□ 0.79
UBE3D-203ENST00000369747 SLC12A7Q9Y666 1083 aa20.02■□□□□ 0.79
UBE3D-203ENST00000369747 TRAF5O00463 557 aa20.01■□□□□ 0.79
UBE3D-203ENST00000369747 INPP5BP32019 993 aa20.01■□□□□ 0.79
UBE3D-203ENST00000369747 NOVP48745 357 aa20.01■□□□□ 0.79
UBE3D-203ENST00000369747 CEBPZQ03701 1054 aaKnown RBP20.01■□□□□ 0.79
UBE3D-203ENST00000369747 LDHDQ86WU2 507 aa20.01■□□□□ 0.79
UBE3D-203ENST00000369747 ANKS1AQ92625 1134 aa20.01■□□□□ 0.79
UBE3D-203ENST00000369747 HOOK2Q96ED9 719 aa20.01■□□□□ 0.79
UBE3D-203ENST00000369747 PDLIM2Q96JY6 352 aa20.01■□□□□ 0.79
UBE3D-203ENST00000369747 TMEM47Q9BQJ4 181 aa20.01■□□□□ 0.79
UBE3D-203ENST00000369747 ZNF341Q9BYN7 854 aa20.01■□□□□ 0.79
UBE3D-203ENST00000369747 FAM217BQ9NTX9 383 aaPredicted RBP20.01■□□□□ 0.79
UBE3D-203ENST00000369747 ZBTB21Q9ULJ3 1066 aa20.01■□□□□ 0.79
UBE3D-203ENST00000369747 NID2Q14112 1375 aa20■□□□□ 0.79
UBE3D-203ENST00000369747 NTRK3Q16288 839 aa20■□□□□ 0.79
UBE3D-203ENST00000369747 SIAH1Q8IUQ4 282 aa20■□□□□ 0.79
UBE3D-203ENST00000369747 CCDC144CPQ8IYA2 1237 aa20■□□□□ 0.79
UBE3D-203ENST00000369747 ZNF654Q8IZM8 581 aa20■□□□□ 0.79
UBE3D-203ENST00000369747 ZKSCAN4Q969J2 545 aaPredicted RBP20■□□□□ 0.79
UBE3D-203ENST00000369747 ZNF396Q96N95 335 aaPredicted RBP20■□□□□ 0.79
UBE3D-203ENST00000369747 WRNIP1Q96S55 665 aa20■□□□□ 0.79
UBE3D-203ENST00000369747 CABP5Q9NP86 173 aa20■□□□□ 0.79
UBE3D-203ENST00000369747 GJB4Q9NTQ9 266 aa20■□□□□ 0.79
UBE3D-203ENST00000369747 GOLGA8AA7E2F4 631 aa20■□□□□ 0.79
UBE3D-203ENST00000369747 CDKL5O76039 1030 aa20■□□□□ 0.79
UBE3D-203ENST00000369747 ATP2B2Q01814 1243 aa20■□□□□ 0.79
UBE3D-203ENST00000369747 CCDC178Q5BJE1 867 aa20■□□□□ 0.79
UBE3D-203ENST00000369747 CCDC84Q86UT8 332 aaPredicted RBP20■□□□□ 0.79
UBE3D-203ENST00000369747 RGS22Q8NE09 1264 aa20■□□□□ 0.79
UBE3D-203ENST00000369747 KLRG1Q96E93 195 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms