RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 NBPF11Q86T75 865 aa24.52■■□□□ 1.52
SMNDC1-201ENST00000369592 GPRC5AQ8NFJ5 357 aa24.52■■□□□ 1.52
SMNDC1-201ENST00000369592 SH3TC2Q8TF17 1288 aa24.52■■□□□ 1.52
SMNDC1-201ENST00000369592 LPAR1Q92633 364 aa24.52■■□□□ 1.52
SMNDC1-201ENST00000369592 RPAP3Q9H6T3 665 aaPredicted RBP24.52■■□□□ 1.52
SMNDC1-201ENST00000369592 VCPKMTQ9H867 229 aa24.52■■□□□ 1.52
SMNDC1-201ENST00000369592 POTEFA5A3E0 1075 aa24.51■■□□□ 1.51
SMNDC1-201ENST00000369592 SPDYE16A6NNV3 312 aaPredicted RBP24.51■■□□□ 1.51
SMNDC1-201ENST00000369592 NMIQ13287 307 aaPredicted RBP24.51■■□□□ 1.51
SMNDC1-201ENST00000369592 NAPBQ9H115 298 aa24.51■■□□□ 1.51
SMNDC1-201ENST00000369592 ARHGEF10LQ9HCE6 1279 aa24.51■■□□□ 1.51
SMNDC1-201ENST00000369592 RABGAP1Q9Y3P9 1069 aa24.51■■□□□ 1.51
SMNDC1-201ENST00000369592 MKI67P46013 3256 aaKnown RBP24.51■■□□□ 1.51
SMNDC1-201ENST00000369592 GRK4P32298 578 aa24.5■■□□□ 1.51
SMNDC1-201ENST00000369592 ERVK-9P63128 1117 aa24.5■■□□□ 1.51
SMNDC1-201ENST00000369592 ERVK-24P63145 666 aa24.5■■□□□ 1.51
SMNDC1-201ENST00000369592 PPARAQ07869 468 aa24.5■■□□□ 1.51
SMNDC1-201ENST00000369592 ZNF589Q86UQ0 364 aaPredicted RBP24.5■■□□□ 1.51
SMNDC1-201ENST00000369592 RAET1EQ8TD07 263 aa24.5■■□□□ 1.51
SMNDC1-201ENST00000369592 ANAPC4Q9UJX5 808 aa24.5■■□□□ 1.51
SMNDC1-201ENST00000369592 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.5■■□□□ 1.51
SMNDC1-201ENST00000369592 TACC3Q9Y6A5 838 aa24.5■■□□□ 1.51
SMNDC1-201ENST00000369592 PLIN4Q96Q06 1357 aa24.5■■□□□ 1.51
SMNDC1-201ENST00000369592 MYH4Q9Y623 1939 aa24.49■■□□□ 1.51
SMNDC1-201ENST00000369592 TRIM6-TRIM34B2RNG4 842 aa24.49■■□□□ 1.51
SMNDC1-201ENST00000369592 SDSP20132 328 aa24.49■■□□□ 1.51
SMNDC1-201ENST00000369592 PXYLP1Q8TE99 480 aa24.49■■□□□ 1.51
SMNDC1-201ENST00000369592 COA7Q96BR5 231 aa24.49■■□□□ 1.51
SMNDC1-201ENST00000369592 SH2D4AQ9H788 454 aa24.49■■□□□ 1.51
SMNDC1-201ENST00000369592 MKNK2Q9HBH9 465 aa24.49■■□□□ 1.51
SMNDC1-201ENST00000369592 NYAP2Q9P242 653 aa24.49■■□□□ 1.51
SMNDC1-201ENST00000369592 ZMYM6O95789 1325 aa24.48■■□□□ 1.51
SMNDC1-201ENST00000369592 FGRP09769 529 aa24.48■■□□□ 1.51
SMNDC1-201ENST00000369592 FXR1P51114 621 aaKnown RBP eCLIP24.48■■□□□ 1.51
SMNDC1-201ENST00000369592 POTEDQ86YR6 584 aa24.48■■□□□ 1.51
SMNDC1-201ENST00000369592 SLAIN1Q8ND83 568 aa24.48■■□□□ 1.51
SMNDC1-201ENST00000369592 RILPL2Q969X0 211 aa24.48■■□□□ 1.51
SMNDC1-201ENST00000369592 PORCNQ9H237 461 aa24.48■■□□□ 1.51
SMNDC1-201ENST00000369592 BTBD7Q9P203 1132 aa24.48■■□□□ 1.51
SMNDC1-201ENST00000369592 PRDM1O75626 825 aa24.47■■□□□ 1.51
SMNDC1-201ENST00000369592 COG2Q14746 738 aa24.47■■□□□ 1.51
SMNDC1-201ENST00000369592 STK11IPQ8N1F8 1099 aa24.47■■□□□ 1.51
SMNDC1-201ENST00000369592 USP6NLQ92738 828 aa24.47■■□□□ 1.51
SMNDC1-201ENST00000369592 MKL1Q969V6 931 aa24.47■■□□□ 1.51
SMNDC1-201ENST00000369592 ZNF287Q9HBT7 754 aa24.47■■□□□ 1.51
SMNDC1-201ENST00000369592 WDR46O15213 610 aaKnown RBP24.46■■□□□ 1.51
SMNDC1-201ENST00000369592 ADCY3O60266 1144 aa24.46■■□□□ 1.51
SMNDC1-201ENST00000369592 FGAP02671 866 aa24.46■■□□□ 1.51
SMNDC1-201ENST00000369592 HSPD1P10809 573 aaKnown RBP24.46■■□□□ 1.51
SMNDC1-201ENST00000369592 NEDD1Q8NHV4 660 aa24.46■■□□□ 1.51
SMNDC1-201ENST00000369592 ADAMTS5Q9UNA0 930 aa24.46■■□□□ 1.51
SMNDC1-201ENST00000369592 CCDC171Q6TFL3 1326 aa24.45■■□□□ 1.5
SMNDC1-201ENST00000369592 GSPT1P15170 499 aaKnown RBP24.45■■□□□ 1.5
SMNDC1-201ENST00000369592 MAPK4P31152 587 aa24.45■■□□□ 1.5
SMNDC1-201ENST00000369592 PDE4BQ07343 736 aa24.45■■□□□ 1.5
SMNDC1-201ENST00000369592 MTFR1Q15390 333 aa24.45■■□□□ 1.5
SMNDC1-201ENST00000369592 ZNF444Q8N0Y2 327 aaPredicted RBP24.45■■□□□ 1.5
SMNDC1-201ENST00000369592 SPICE1Q8N0Z3 855 aa24.45■■□□□ 1.5
SMNDC1-201ENST00000369592 PAGR1Q9BTK6 254 aa24.45■■□□□ 1.5
SMNDC1-201ENST00000369592 MTMR4Q9NYA4 1195 aa24.45■■□□□ 1.5
SMNDC1-201ENST00000369592 HOXC10Q9NYD6 342 aa24.45■■□□□ 1.5
SMNDC1-201ENST00000369592 DSG3P32926 999 aa24.44■■□□□ 1.5
SMNDC1-201ENST00000369592 MORN1Q5T089 497 aa24.44■■□□□ 1.5
SMNDC1-201ENST00000369592 CEP95Q96GE4 821 aa24.44■■□□□ 1.5
SMNDC1-201ENST00000369592 SYNPO2Q9UMS6 1093 aa24.44■■□□□ 1.5
SMNDC1-201ENST00000369592 COL11A1P12107 1806 aaPredicted RBP24.43■■□□□ 1.5
SMNDC1-201ENST00000369592 SLC3A2P08195 630 aaKnown RBP24.43■■□□□ 1.5
SMNDC1-201ENST00000369592 ELNP15502 786 aa24.43■■□□□ 1.5
SMNDC1-201ENST00000369592 EN2P19622 333 aaPredicted RBP24.43■■□□□ 1.5
SMNDC1-201ENST00000369592 NOVP48745 357 aa24.43■■□□□ 1.5
SMNDC1-201ENST00000369592 CTDSPL2Q05D32 466 aa24.43■■□□□ 1.5
SMNDC1-201ENST00000369592 TTC22Q5TAA0 569 aa24.43■■□□□ 1.5
SMNDC1-201ENST00000369592 GPR142Q7Z601 462 aa24.43■■□□□ 1.5
SMNDC1-201ENST00000369592 INCENPQ9NQS7 918 aa24.43■■□□□ 1.5
SMNDC1-201ENST00000369592 ORC4O43929 436 aa24.42■■□□□ 1.5
SMNDC1-201ENST00000369592 TANGO6Q9C0B7 1094 aa24.42■■□□□ 1.5
SMNDC1-201ENST00000369592 GOPCQ9HD26 462 aa24.42■■□□□ 1.5
SMNDC1-201ENST00000369592 XRCC5P13010 732 aaKnown RBP24.41■■□□□ 1.5
SMNDC1-201ENST00000369592 FAM47AQ5JRC9 791 aa24.41■■□□□ 1.5
SMNDC1-201ENST00000369592 MB21D1Q8N884 522 aa24.41■■□□□ 1.5
SMNDC1-201ENST00000369592 TMEM106CQ9BVX2 250 aa24.41■■□□□ 1.5
SMNDC1-201ENST00000369592 NBPF3Q9H094 633 aa24.41■■□□□ 1.5
SMNDC1-201ENST00000369592 LAMA4Q16363 1823 aa24.4■■□□□ 1.5
SMNDC1-201ENST00000369592 F5H6K3 240 aa24.4■■□□□ 1.5
SMNDC1-201ENST00000369592 HIP1O00291 1037 aa24.4■■□□□ 1.5
SMNDC1-201ENST00000369592 NDUFB10O96000 172 aa24.4■■□□□ 1.5
SMNDC1-201ENST00000369592 INHAP05111 366 aa24.4■■□□□ 1.5
SMNDC1-201ENST00000369592 CCL5P13501 91 aa24.4■■□□□ 1.5
SMNDC1-201ENST00000369592 CCNA1P78396 465 aa24.4■■□□□ 1.5
SMNDC1-201ENST00000369592 TFAP4Q01664 338 aa24.4■■□□□ 1.5
SMNDC1-201ENST00000369592 ATP2B2Q01814 1243 aa24.4■■□□□ 1.5
SMNDC1-201ENST00000369592 KLRC3Q07444 240 aa24.4■■□□□ 1.5
SMNDC1-201ENST00000369592 PLEKHH3Q7Z736 793 aa24.4■■□□□ 1.5
SMNDC1-201ENST00000369592 SOCS4Q8WXH5 440 aa24.4■■□□□ 1.5
SMNDC1-201ENST00000369592 ATG4CQ96DT6 458 aa24.4■■□□□ 1.5
SMNDC1-201ENST00000369592 IL17RBQ9NRM6 502 aa24.4■■□□□ 1.5
SMNDC1-201ENST00000369592 FBXO28Q9NVF7 368 aa24.4■■□□□ 1.5
SMNDC1-201ENST00000369592 CLIP2Q9UDT6 1046 aa24.4■■□□□ 1.5
SMNDC1-201ENST00000369592 FLOT1O75955 427 aa24.39■■□□□ 1.49
SMNDC1-201ENST00000369592 CWC27Q6UX04 472 aaKnown RBP24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms