RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 PICK1Q9NRD5 415 aa12.78□□□□□ -0.36
BRCC3-204ENST00000369462 A0A1W2PRG0 241 aa12.78□□□□□ -0.36
BRCC3-204ENST00000369462 PPFIA3O75145 1194 aa12.78□□□□□ -0.36
BRCC3-204ENST00000369462 DDAH1O94760 285 aa12.78□□□□□ -0.36
BRCC3-204ENST00000369462 CALM1P0DP23 149 aa12.78□□□□□ -0.36
BRCC3-204ENST00000369462 CALM2P0DP24 149 aa12.78□□□□□ -0.36
BRCC3-204ENST00000369462 CALM3P0DP25 149 aa12.78□□□□□ -0.36
BRCC3-204ENST00000369462 CDC27P30260 824 aa12.78□□□□□ -0.36
BRCC3-204ENST00000369462 ECE1P42892 770 aa12.78□□□□□ -0.36
BRCC3-204ENST00000369462 IREB2P48200 963 aaKnown RBP12.78□□□□□ -0.36
BRCC3-204ENST00000369462 MAP3K9P80192 1104 aa12.78□□□□□ -0.36
BRCC3-204ENST00000369462 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.78□□□□□ -0.36
BRCC3-204ENST00000369462 ACER1Q8TDN7 264 aa12.78□□□□□ -0.36
BRCC3-204ENST00000369462 GREB1LQ9C091 1923 aaPredicted RBP12.78□□□□□ -0.36
BRCC3-204ENST00000369462 CPLX1O14810 134 aa12.77□□□□□ -0.36
BRCC3-204ENST00000369462 RCAN1P53805 252 aa12.77□□□□□ -0.36
BRCC3-204ENST00000369462 RTN1Q16799 776 aa12.77□□□□□ -0.36
BRCC3-204ENST00000369462 RASGRP2Q7LDG7 609 aa12.77□□□□□ -0.36
BRCC3-204ENST00000369462 ARHGEF10LQ9HCE6 1279 aa12.77□□□□□ -0.36
BRCC3-204ENST00000369462 FAM217BQ9NTX9 383 aaPredicted RBP12.77□□□□□ -0.36
BRCC3-204ENST00000369462 GINM1Q9NU53 330 aa12.77□□□□□ -0.36
BRCC3-204ENST00000369462 USP17L5A8MUK1 530 aa12.77□□□□□ -0.37
BRCC3-204ENST00000369462 DHX16O60231 1041 aaKnown RBP12.77□□□□□ -0.37
BRCC3-204ENST00000369462 VGLL4Q14135 290 aa12.77□□□□□ -0.37
BRCC3-204ENST00000369462 CTCFLQ8NI51 663 aaPredicted RBP12.77□□□□□ -0.37
BRCC3-204ENST00000369462 INTS4Q96HW7 963 aaKnown RBP12.77□□□□□ -0.37
BRCC3-204ENST00000369462 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.77□□□□□ -0.37
BRCC3-204ENST00000369462 ITGBL1O95965 494 aaPredicted RBP12.76□□□□□ -0.37
BRCC3-204ENST00000369462 PTPRAP18433 802 aa12.76□□□□□ -0.37
BRCC3-204ENST00000369462 ARMC9Q7Z3E5 817 aa12.76□□□□□ -0.37
BRCC3-204ENST00000369462 CMTR1Q8N1G2 835 aaKnown RBP12.76□□□□□ -0.37
BRCC3-204ENST00000369462 CCDC82Q8N4S0 544 aa12.76□□□□□ -0.37
BRCC3-204ENST00000369462 CSADQ9Y600 493 aa12.76□□□□□ -0.37
BRCC3-204ENST00000369462 CCDC196A0A1B0GTZ2 297 aa12.76□□□□□ -0.37
BRCC3-204ENST00000369462 KIF3CO14782 793 aa12.76□□□□□ -0.37
BRCC3-204ENST00000369462 ZYXQ15942 572 aaKnown RBP12.76□□□□□ -0.37
BRCC3-204ENST00000369462 USP17L2Q6R6M4 530 aa12.76□□□□□ -0.37
BRCC3-204ENST00000369462 ZHX2Q9Y6X8 837 aa12.76□□□□□ -0.37
BRCC3-204ENST00000369462 F5H6K3 240 aa12.75□□□□□ -0.37
BRCC3-204ENST00000369462 UBE2Q2LH0YL09 131 aa12.75□□□□□ -0.37
BRCC3-204ENST00000369462 JAK2O60674 1132 aa12.75□□□□□ -0.37
BRCC3-204ENST00000369462 CELF2O95319 508 aaKnown RBP12.75□□□□□ -0.37
BRCC3-204ENST00000369462 CTDNEP1O95476 244 aa12.75□□□□□ -0.37
BRCC3-204ENST00000369462 KLRC3Q07444 240 aa12.75□□□□□ -0.37
BRCC3-204ENST00000369462 NOL9Q5SY16 702 aaKnown RBP12.75□□□□□ -0.37
BRCC3-204ENST00000369462 ANKRD13AQ8IZ07 590 aa12.75□□□□□ -0.37
BRCC3-204ENST00000369462 FEZ1Q99689 392 aa12.75□□□□□ -0.37
BRCC3-204ENST00000369462 SMC3Q9UQE7 1217 aa12.75□□□□□ -0.37
BRCC3-204ENST00000369462 TMX2Q9Y320 296 aa12.75□□□□□ -0.37
BRCC3-204ENST00000369462 SNCAIPQ9Y6H5 919 aa12.75□□□□□ -0.37
BRCC3-204ENST00000369462 GOLGA8HP0CJ92 632 aa12.75□□□□□ -0.37
BRCC3-204ENST00000369462 PDHBP11177 359 aa12.75□□□□□ -0.37
BRCC3-204ENST00000369462 YY1P25490 414 aa12.75□□□□□ -0.37
BRCC3-204ENST00000369462 KIF5BP33176 963 aa12.75□□□□□ -0.37
BRCC3-204ENST00000369462 PPP2R5BQ15173 497 aa12.75□□□□□ -0.37
BRCC3-204ENST00000369462 MAP3K11Q16584 847 aa12.75□□□□□ -0.37
BRCC3-204ENST00000369462 CPLX2Q6PUV4 134 aaKnown RBP12.75□□□□□ -0.37
BRCC3-204ENST00000369462 SPICE1Q8N0Z3 855 aa12.75□□□□□ -0.37
BRCC3-204ENST00000369462 STAG2Q8N3U4 1231 aa12.75□□□□□ -0.37
BRCC3-204ENST00000369462 NSUN7Q8NE18 718 aaKnown RBP12.75□□□□□ -0.37
BRCC3-204ENST00000369462 CLMNQ96JQ2 1002 aa12.75□□□□□ -0.37
BRCC3-204ENST00000369462 MAP3K14Q99558 947 aa12.75□□□□□ -0.37
BRCC3-204ENST00000369462 PARP1P09874 1014 aaKnown RBP12.75□□□□□ -0.37
BRCC3-204ENST00000369462 SPP2Q13103 211 aa12.75□□□□□ -0.37
BRCC3-204ENST00000369462 GRM4Q14833 912 aa12.75□□□□□ -0.37
BRCC3-204ENST00000369462 SLFN13Q68D06 897 aa12.75□□□□□ -0.37
BRCC3-204ENST00000369462 DDX11Q96FC9 970 aa12.75□□□□□ -0.37
BRCC3-204ENST00000369462 LLPHQ9BRT6 129 aaKnown RBP12.75□□□□□ -0.37
BRCC3-204ENST00000369462 RBM28Q9NW13 759 aaKnown RBP12.75□□□□□ -0.37
BRCC3-204ENST00000369462 MAD2L2Q9UI95 211 aa12.75□□□□□ -0.37
BRCC3-204ENST00000369462 ISY1Q9ULR0 285 aaKnown RBP12.75□□□□□ -0.37
BRCC3-204ENST00000369462 NID2Q14112 1375 aa12.74□□□□□ -0.37
BRCC3-204ENST00000369462 MYH4Q9Y623 1939 aa12.74□□□□□ -0.37
BRCC3-204ENST00000369462 PLEKHA8P1O95397 391 aa12.74□□□□□ -0.37
BRCC3-204ENST00000369462 NDUFB10O96000 172 aa12.74□□□□□ -0.37
BRCC3-204ENST00000369462 SLC1A4P43007 532 aa12.74□□□□□ -0.37
BRCC3-204ENST00000369462 NTRK3Q16288 839 aa12.74□□□□□ -0.37
BRCC3-204ENST00000369462 PHKBQ93100 1093 aa12.74□□□□□ -0.37
BRCC3-204ENST00000369462 SH2D4AQ9H788 454 aa12.74□□□□□ -0.37
BRCC3-204ENST00000369462 ELP3Q9H9T3 547 aa12.74□□□□□ -0.37
BRCC3-204ENST00000369462 GBA2Q9HCG7 927 aaPredicted RBP12.74□□□□□ -0.37
BRCC3-204ENST00000369462 FRMPD2Q68DX3 1309 aaPredicted RBP12.74□□□□□ -0.37
BRCC3-204ENST00000369462 PTPDC1A2A3K4 754 aa12.74□□□□□ -0.37
BRCC3-204ENST00000369462 TRIM75PA6NK02 468 aa12.74□□□□□ -0.37
BRCC3-204ENST00000369462 SNHG28P0DPA3 235 aa12.74□□□□□ -0.37
BRCC3-204ENST00000369462 GJB2P29033 226 aa12.74□□□□□ -0.37
BRCC3-204ENST00000369462 ZNF280CQ8ND82 737 aa12.74□□□□□ -0.37
BRCC3-204ENST00000369462 GMCL1P1Q8NEA9 526 aa12.74□□□□□ -0.37
BRCC3-204ENST00000369462 AS3MTQ9HBK9 375 aa12.74□□□□□ -0.37
BRCC3-204ENST00000369462 SYNPO2Q9UMS6 1093 aa12.74□□□□□ -0.37
BRCC3-204ENST00000369462 ATAD5Q96QE3 1844 aa12.73□□□□□ -0.37
BRCC3-204ENST00000369462 PALM3A6NDB9 673 aaPredicted RBP12.73□□□□□ -0.37
BRCC3-204ENST00000369462 USP17L10C9JJH3 530 aa12.73□□□□□ -0.37
BRCC3-204ENST00000369462 KLRF2D3W0D1 207 aa12.73□□□□□ -0.37
BRCC3-204ENST00000369462 CDKL5O76039 1030 aa12.73□□□□□ -0.37
BRCC3-204ENST00000369462 TMEM132AQ24JP5 1023 aa12.73□□□□□ -0.37
BRCC3-204ENST00000369462 CCDC96Q2M329 555 aa12.73□□□□□ -0.37
BRCC3-204ENST00000369462 CST9Q5W186 159 aa12.73□□□□□ -0.37
BRCC3-204ENST00000369462 TMTC3Q6ZXV5 915 aa12.73□□□□□ -0.37
BRCC3-204ENST00000369462 KCTD1Q719H9 257 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms